Cucsat.G13186.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13186.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B-like
Location	ctg1838: 1889347 .. 1904504 (+)
RNA-Seq Expression	Cucsat.G13186.T3
Synteny	Cucsat.G13186.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATCAAAATGGTGCATTTCCCACCGGAAAAAGGCCAAGCAGATTGTCGAAACATGGGATAAATTATTCAACTCATCGCAGAAAGAGCAGCGTGTTTCATTTCTGTATTTGGCAAATGATATTTTGCAAAACAGCAGGCGCAAGGGAAGTGAATTTGTGAACGAATTCTGGAAAGTTCTTCCTGGTGCCCTCAAGTATGTATACGATCATGGCGACGAAAGTGGAAAGAAAGCAGTTGCCAGACTTGTATGTCTTCTTTTTACTTGTGCAGAAAAAAAAATGGCAATAAACCTTCATATGTTTTTCCCCCTAGAAGCATGTCAATTAACTCTTTGAACATTTTGCCCAAAAGTAAAGCATTTTGCATATCTGACATTAAAATTCTTCTCCTCCTTCCCCTCCCACATAAAAAATGGGGTGAAGAAGAAAAACGGAAAAGGGAGGATGGAATCCATTCATTGATTGACACATTTATATCATAAATATTTCTACTAAGGCTTCTCAGAGATTGACATTTGGTAATAGAACTTTCATTTCTATTTAGGCAAGTCTTTTGATACGTGTTTCATGGGTACTGTGGTTGCCCAGTTGATGATTATTCCTAAAGCTTGCATATTAGACAGGAATCCTCTAGTAAATTAAGGATATGTGGGTTTTAAACTTCTGTTTGAAGCATAATAAGTGGTTGCTTTTGCCTTTCCATTTGTTCCATTCCTAGACCTAATTTAGATTAGTTTAGGTTTTTTGTTTTCTTATTTTTTTTAAAAACTAAGGAGTTTAGGAATCTTTTCTTAAACGGAAATCGAACTTTTTCCTTGAAATAATAAAAGAATTTAGGATCTATGAACCTTGTAAGGGATAGATGAAATTTTGATTTGATATTATGATTAATATTTATTAGGAGGGAAGAAAGGAAAATGAGCTGAGGTTTCTTATAAAGACGCAGCTTGTCATTTGAAAAGCCTATAGTTTAGTGTTATGGTTTTCTTGATTCTATTAACTATGGTACATATTTTAAAGACAAGTTGAGATGATAACCTCCTACATTCGTTCATTTCCAATCTTAAATTTTTTGTTATTTTGGAAAAGAAGCGAGAATATTTTATTGAAATAAGGAAAAGAGATTAATACTAGAAAAAAGTACAAAGCTCCAATTGGGAAATAAAGGAACAACTAAGGATGAATGTAAAGGGAGTAAAAACTGTACAATTAGTGTTAAAACCTCCCGAAAATGAACAAAAAATAATGATCCAAACAAAACATCAAATTAAAGTCCAAAATTGCTGAGTTTTATGCAAAAGAGACTGAAAGAGGAAGGAAACGAAGTTGGCTAAAGATAGATCACGGAAGACAAAAATTTCCAACCGCATTAAACACCAAACCACCAAATAAGAAGGCCCTAAAATCTTCTGAAAAAGGCTTCAATAAACAAACTTCCAATTTCAAAATGAAATGGAAAAGATCTTCAACACCAGTGTAATTAAAAACTTATGATTCACGATTTGTATCATACAATTCAAATCAAAATGAAGGGCAAACCAAATGATTCAAATCGTGATTGTGAATTGAAAATTATATGTATGATACAAGTCTGGATAAGACGTGCAATATATTCTTGTTAATGTAAGACCAAAGATTAACTAACGTTGATTGACACAAGATTTGATTTACCATTCTTTCTTATACTTGTGGATGTTTTAAATAAGTTGTTGATCAGGTAACATTTGTTGATATTTGAAAGTTTTTGATCAGCCAAGATTTGATTATCCTAATAAGCCTTGCTAAGTCTTTGGGGAAATTTTATATTTACAAAATTCTTAAGATAGCATATTGTGAATTCATAATGTAATTTTGAAGTCCCCGATCATTATTTCTTCCGGATCAGCCTTATGCATCAACAAGTTTTTCTGCTCAATCAAGGATTATTCTTCTTTGTTCTTGGCTGCTGCCTTTGTTTTATGTTTTGTTTTTGGACAGATTATGTATATTTGTATTGGAATAGCATCCTAGTATAAGGGTTTTATTTTTGCTTCTTGGATGTGATGAGGGCACTATGGGGTGTCAACCTAGTTGAGATGTCCGGGTGCGCCTGCTGATCCCCCCTATTTCTCCTTGTATAATCCTTTGGACATTGAGCTTTGTCTCTCTATTTTTCTATATATTAATAATAGTGAGACTTGTATCATTTTCAAAAAATCCTAATTAATTAAAGAAACTAATCCTAATCCTACTAGGAACAAGGTATCATGGTCAAATCCTTAATCTATTAGATTAGGATTAGCTGTTTTTGTTAATTAGGATTGGGATTAGTTTCTTTGGGTTATTAGGATTAGGAATAGGGTATTATGGTCAAACCCTTTCACTAGAATTAGTTTCTTTTATTAATTAGGATTAGGATTAGTTCACTTTTCAATTATAAATAGAGTAGTTGTTTTCATGTATTCACAACTTTTAAACATTAACAAAATTCTCATATTTGATATACACTAATTTGGTACCAAAGCAGCCGTCTAGGCTAACGTTGACTGCCATTAGTAGAAGATCGAGAAACTTTTCGTCACTTCGGTCACAAGAGGGAGCTTTGTGAGCTGTGCTTGTTGTCAAACAACACATATCTATCTAGGGGGAACCCGTAAAATTTCAAAGAAAAAAAAATAACCAAACATTTATCAAGATTTTGCAAGAACGTAACTTTTTAGAACTACTCTAATTTGGGATAAAAATTATCATAGAGATCAACCAAGAAAGGTTGAGAAACATGCAAGAAAATTTAAGAATCAGTCCTACAACAATGATGAAGAAGCTTAGTAAGGGTGTTCCAAGTTTTTTTGAAAACGGAATCGTTAACAGAATATTTTGATTGCTTTTGAGGCCGTTGATGAATGGTCTTTAAAAGGTAGAAAAGGTGTTCTCTCTTGATCTGGAGAAAGCCTATGACAAGGTGTATTGGTTTTTTCTTGATATGGCCATGAAACTTGAAGGCTTTGGTAAGGGATGGAGGAGATGGATTTGGGACTGCTTGTTGACTACTAACTTCTTGATCATTGTAAACGGTAGGCCTAGAGGAAAGATTACTGCTAAAACGAGCATTCGTTAGCCTCTTGCCCCTTTTCTTTTTACGATCATCAGAGAGCCGTAAGCTGCCTTATTTACTATTGTAATGAGAAGAACTATAAGAAACTTCCATTTTGAGAATTTGTCAGATGAATTAATCCATCTTTAATACATGGATGATACTCTTCTCTTCTCTTCTTGGGAGGATGGAAATTTGGAGACATGGTGGAGGGTGGTTAATATCATTCTTCTTGGAGTTGGTTTATCCCTTACTAGTTCCAAAACGTCTTTAATCGTTTACCTTAACATTGATGATTTGGCTTTTTATACTAATATTTTGGGTTGTTCGATGGGTAGTCTCCCGTTTAACCACCTAGGCTTATCTATTGGAGGGGGTCGTAATAGAAAAGAGGTGTGGAACGCCTTTGAAGAGCGATTCAAATATAAAATTGACGGAGGAATTTGCCCCTTTCCAAAGGGGGCAAGCTAACTCTTGTGCAATCGGTTCTGAACAGCCTTCCTTGTTACTTATTTTCCCTTGCATAAGCTCCGGTTGGTGTTATCGATAGACTGGAGAAGAGGATTAGGAATTTTGTTTGGACAGGAGGTTGGTCTTCTAATTCGGTTACCCACCTCCTCTTGCCTGATCTGTTATGGTGGCCTTGGGATTAACTCGTTTGGGCAAAAGAACACTGCTATTCTCACTAAATGGCTTTGGAGGTTTAGCAAGGAAGAAGCTTCTTTATGGGGGCGATTAATTGTGGCCATATATGGCTTAAAGGAGAATGCTTGGTCTACTAAAGACCCGAATAGGGGAAGGTCTTATAGATTATGGGCTGGAATCTTGAAACATAAGGAGACCTTTAAATTGTTAGCTTTTTTGTTGGGAGAGGGAACCATAATCAGATTTTGGAAGGACGGTTGGTGTGACGTGCAACCATTAGCAGAAAAATTCCCTAACTTGTTCTCCTGGTCATTGAACAAGGATGCTTTTGTGGCTGAATGTTGGTGTAATGTTAGTCATTCTTGGAACTCGGGCCTTAGAAGAAATGTGCTTGATAACGAGCCTGACAACGTGGCCACAATTCTGAAAATTCTTCATTCTTGGGCCCCTTCAGATGGTGGTGATAGTCTTAAATGGATTCCTAATGTTAATGGCAACTTTACTACGAAGTCTACGTTTCTTCTTATGGTCACTCACCTATAGAAGTCATAACACTTGTAAGAAACTCCAAAAAAAATTCCAGCACACTATGCTAAGCCCCTTGATGTGCTGATTTTTGCATTCTCTCATTACTAGGAAAGCTTGGAACACTTTGTTCAGAATCTTTCATTTGGAGCTTGTCTTCCTATTTCCTAGTAAGGTTGATAGTTGGATGCTGGAAGGACACAACATTAGAGGTTATAGTCCGAAAGGAAACATCTTCTGGAGATGTGCTACCTGGTCCCTTTTGTGGTGCATTTGGAAATAGAGGAATAGTAGAATTTTCGAAGACAACTATAATTCTTTTGATTCTTTTTGGACTATGTTGCAACACACAACTTTTTGGTGGAGTATGAATTACACCAAACACTTTTGTATTCGCAACCTTTCTATGATTTTCAACAACTTCTTGGGGAGGGCTCTCTTGTCCCTTGCCCTTAGGTTGTTCTCTTTCGTTTTATGAATATACATGTTTCTTATAAAATAAAGCTTAATAAAAAACACCCAATTTGTTCGTCAATCGTGAAGTTTCTGAAGAAACAAAGAAGGATATCAAGAAAATCCTCCGTTTTTTGGGAGAAAATTCAAAACATGGAGCAATTTTCAGAACATTTGCAAGAACCTTAAAAAGATGTAATTCAAGAAATTCACTACGAGGAAGGAATGGATGAACACAAATTGAGGAGCCCACACAAAATTTCTAAAATGAAAAAGAAAACCCACGGGAAACTGATTAGAAGAAACTTGAAAACCTAATTACAGTTGACTACGAAACAAATGGGGGAGATGATATGTCTTGAATAAAAAAAATTAGGTATTTGGTCGGCAAGGCAGAGGTGACCAAATCAAAAGATCTGACCAAGAAGATGAAAGACACATTTTTTATGGAAAATAAAGTAGAAAATCATGTGGTTGATGAAGATCCTCAAAAGCGTATTGGCAACCTATTTGTAGTTGTAAACAAAGGAGAAGAAGACGACACAACTTTTTGGCAACCAATTTGGTCTCGCAAATTTATTACCCTTTTTCAGACCCTACCTGAAAGACCCATGACTCATGTATTCTTTTTCTCCCTAAAACACAAACCCAAATCCAGTTCAAATTTGGCCCTCATTCCCTTTTATTGAGTCTATTGACTGACCCATACACAATTGTTAAAATGCAGGAAACCCATCCCCAATTGAATTTTCTTCGCTCTTACAAACTGGGGTTTTCCTCATTTTCTGAAAATTCTGCCGATTCTTTTTATAGTAGAGGATTTTTTGAACAATTTAGTTATTGGGTTCATTGGCTTTATCATGAAAGATTGAATTTTTTTTGAAACGGAGACAAGAATTTCTTTATTAATATGAACTCAAAGTACAAGAGATTTATACAAAGAGAGCCATAAAAAAGTAGTAATCAAGGGAGTCCTAGAGGGATCAGGAGGCACACCCGAACATCTCAACTAGGTTGACTTTCCATAGTGCCAAACATCATATCCCGAGCACAAACAAACAATAATAAAAGCATCCAGCTTAGTACAAAGGTCCAGAAAACAGTATGGGATTGGAAGAAAACAACAAAATTGAATATTTTTTATGTTGAATGTTCCAAGATGTTTCCATTCAAGTGATTTGCTTTTTTATTTTCATCCTCATTTTCGTTTTTTTTTATACAGAGACAAAACCTCTTTATTAATATGAACTCAAAGTACAAGAGATTTATATAAAGAGAGCAATAAAGAAGTTGTAATCAAGGGAGTCCTAAAGGGAACAAGAGGCATACTCGGACATCTCAACTAGGTTGACACCCCATAGCGCCAAACATCACTCGATTAAAAACATAAAAAACCCATTTTTGTTTTAAAACTCGAGGACTAGTTTTTTCTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGAGGGGAGGGATAGAATGATGTTGTAGGAATAGGGTATTATGGTCAAATAATTAATCTATTAGGATTAGGATTAGTTTCTTTTATTGATTAGGATTAGGATTAAATTTTTTTGTTTATTAGGATGATTAGTTTCTTTTATTAACTAGGATTATGATAGGATGGATGAATGAATGGATTAGTTTTTTCAAAGAGGATGGATGAATGGTTGATGTTTATTTTTAATGGAAACATGTCTCTTTATTAATATAAATGAAAGAGACTAAAGCTCAAAGTACAGGAGACATACCAAGAGCAAAAAAGACTAAAAAAACACATACAACATAAACTGATACAAGAGAGAACATAAAAAATTTCAACGAGCTGGACAAGACCATCTAGAATCCGAGCAAGACAAGAAGAAAATACAAGGCAAAGCGAAAAAAAATTCAACAAGGAGCCCCAAATCAGCTAAAATCTTAATCCCAAATGGCTTAAAAAATGAATGGGAAGAACACCATGAAAAGGTGACCAACCGAGCTGCATCAAACTTGATTTAAAAGTACGAATGTGTGCCCCGGAAGACTTGCTGAAATCTTCCATCTCACAAAAAAAACTGCACATGTACTATTGAAAAACCAATCAATGGTCCAAATATTTGAACAGAATTCTGAAAGGAAGAAAGAAAGAAAGAAATACAAAGAAAAAGGCCAAACATGAAATCTCTCGCTTTACAAAAAGACCATTATCTTGCTTCAACAATCCTTCCCAAACGCCTGAGACTCATTGTATTCCCATTCAAATATTAAGATTAAATGTTTGCGGGACCAGAGAACATGTGTACTTTCAGTGCTCAAGCCAAAACCAACCTACATTTCTCAACAAAGGACTTCAAATGATCTAGAATACCACATGGACGAGCTTGTGAGGGATTTCCAGCAGCTTGTTTCTCAAAAAATGAATCTTACTCAGTCAAATAGAGAATTTAGATCAGTCTCTAAAGGGTCTTTCAACAATTGATCTTCCTTCTCATCTAAACTTATAAAATCACCATCCTCACTGCTCATACTGAATGGAGAGTCAAAATTGGAAACAACCTTCTTTTTGGATGGGGGGACCTGAGTTTGGCTGGGAGAACCTCACACAAGAACTTTAACTTTGGATTAGGTAAAGAAAGAACAGAGTAGTTTAAATGTGGATGAATCGTGCTTTGAAGAACCAACCTATTTGGAAAAGATGGGCACAATTTGATTCTAAAAGATGAGGATTCTGAATAGATGATGTTAATGTTAGCAGTTACTTTGACATTTGATCCATTGAGAGTTGATGAAGAGTGGTTTTTTTTTTTTTTGTTGACTTGAAGGGAAGAGAAGAAAGAAAGGAAGAAGGCTCAAGTTTATATGTGTGTGTGTGTGTATTTATATATAAAATATATATTTTTAGGAAGAATGATAGGTTAAGAACAGGAGAGATTTTAAGAGATCGAAGAGAGGAAAAAGGTAAGAAGAAGAAGGGCAAGAAGAAGAGATCAATAATATATGATGGAGAGAGAAGTTTCAATTCTGGTCTCACATGTTCAATTCAATTCTTTTCTCCCTTTCGATGATTTTCTAGATTTGCTGTATTGGGTGGATTCTGCTCTCATTCTAATAGGCTGGATCTTGTTCTCATTGTTGTAACAAGCTAGTTTTAATAAGGATATGATATTTTGGTGCTAAGGGGGTGCTGACCTAGTTGAGATGTTCGGGTGCTCCTTCTGATCCCTGTTCTTCTTTTGCTTGTATAGACTTCTTTATTTAGCTCTTTGTATAATTCTCTTATACATTGAGTTCTTATTATTAATAAAGAAGTTTGTCTTTGTTTCAAACAAAAAACAAAAACAAAAAAAAATTCTGGTCTCACACGTGGAGACCCTCACCGGATTTGACTGGAGTAGTCCACGTTTGGTGGATGGCGGTGACCATCATTGTTGGCCGTGGTTGAAAACGCTCCATGAAGAATGCTCAAGATTAGGCTATGATGCTATGAAAAATCCAGAGTTAGAGAGAATTTTAGTGAGATAAAAAGAGAAGTGGAGAGAAGGAGAAATGTTCATTAGGGTTTCTCATCAATTAAGTTGATGAAGATTCTTTTGATGATGGTTTATGCTTTCTTTCAATAATGGTGGGCAATTTGATTGGTAAGATAGAGCTAGGTTATCTAAGGGCCATCCCTTTAGCAAAATTCTTTGTGCTCTCTCAGTTTCAATGGATTAAGAAGATATTTCCCATTATTTTGAAGAATTTAGTGTTATTGATAAGGCAATCCTAATCCTCAATCCAAAGATCCAAGCTATTAACGTAGCAAGAACCTTTGAAATAAGAAACTAACACCTCCTTATACTATTTTAGATCAAACAAGAGAAAGTACGTGTTAGTTATTGAGGAACTTTCTTCATGAAGAATGAATGATTGGTTAATCTTTGATGTCTTCAATCTTGTAATTGGTCCGTATGGAACATCATGATTCTTATCAGTTACTCTCTGTGAAATAAAGCCTAAGAGTTATTGTTAAATACTGGTTGCACATTACTGTGACTTTAACGTACAAACTTCAATTTCTTTTTCATAAAAAAGTGCATTGTACTTTTTTTTTTAAAGTGGAAACAAACTTTTCATTGACAAAATGAAAAGAGATTAAAGATTGAAATACAAGGAGACATAAAGAACATAAAAGAACAACCCCAAAATCAGCCCCAAAAAGCATCTTATAGTTTGATAGATCTAATGAAATTTTATACATTTTTCTTTTTTGATTACAGATCACAATCCATTGACATTTCCTTCTGAATTATCCTTCTCTCGTGTTTTTTTTTTTTTTTCTGTTGTTATTGTTGTTGAAATACACGTCTTGTAATGTTGATTTTAAATTGTAACATCTCTTTCCTTTTTTTCTATTGAAAGTATCTCAAGTGTTATTTAAGTTGGGATTTCATTTGTCTCACTCAATTTTGTTTCCCTTCATGGGAGTTGGTTTGTTAAGGTCAATATTTGGGAAGAAAGGAAGGTTTTTGGTTCTCGGGGGCAGAGTCTTAAGGATGAAATGCTTGGTAAAAATCCACCTCCAACTCCGTTACCCAGCAGCAATGGAAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCTCACTCTGTGAGAATTGTAAGAGCTTAGCTGTGGTAGCAGTGGACTATTGCAGTTTTTTTTTTTTTTTCTTGTGTTATGACTCCTATATCTTTACTGCTTAACTCTAGAAACTGGCTGTTGGAGGTGTTCCAGAGAAGATTCTTACTGCATTTCAATCTGTCCTTGATGAGCATCTGAATGAAGATGCTGCTCTGATCAACTGTAGCTCTGCTACTCATCATCTGAATCAAATTGAGGAGGACTTGAATGTCTCCTTAGCTCAAGGTATAGCCTCATTTACTATAGTCATCGCATGCAATTTTAGTTTAAGATGTTGTCAAGTAAGCCAAGCTCTGCATTATAAGGGTGGTCTTTGTATGAAGTGATAGTCATGCAATATAGACTTCTGATAGAACCCAAACTTTCAATATCCATTAGAGTATGTTATTATGAAAGGGACCTCATGTACTTTAGATAATCAAGTACTTATGTTTGTAAACGATGTGTTATTAATAAGATATTTATGATAAGTTCAATTTATTTATTTATATGTTTACCTTATTTATTTATTTATATGTTTACCTTATTTATTTATTTATATGTTTACCTTATTTATTTATTTGTATGTTTACCTTATTTATTTATTTATATGTTTACCTTATTTATTTATTTATATGTTTACCTTATTTATTTATTTATATGTTTGCCTTAAAAAGAAATCTTATCAATGGGATTTAACCTAGTTCATTGGCTATGAGCAACTTTTTTTTCCCTTGTAATGCAATCAGTAATGTTGGACTTTGCAGTATAGGATATCGGGTCTGAATTTGTACCAATACATAGATCTGTGTACTTAATATCAGTATTTTAAGATGCATCCTAGGTGCACTAGGTAACTTGAGGGTGCGCGACTTTTGTACTGAATTGTTGATTTAAGAGCTATGCCTGAGTTGGTATTCTCACTAAGGTGTGCCTATAAGTTTATATTTTAAACAATCTTTATTATACAATTTTTTATTTTTTAGTTTCTCAAAAGACTATATTTTAACAATGTCGTTAAAAACTCATTTCTTTTAAGTTTTCATTATTTATAAGACTATTTTATGGATACATGTCTTTCTTTATACTTTTCTGGTTTGTTCTTGAAAAACATTACTTATTTTTTGTTTTCCATTTTCTTGAAAAACATTCCTTATATTTTTGCTTTGCATTTACTTTCTAGACATCTATTGCGTCTTCAGTGCATCGTGCAGTTTACAATACACTATTACACAAAGATACTATTAGTATTATTTATTCAGATACTATGAATTATAGGCATCTCATTTTATACAATAGTAGAATTCATGAGGATGCCAAATCATTAGGTAATGCATTCAGGTGCCTTCTTCTTGGTTAAGGTCATGGCTTTGGTCTCCCAAAAAAAATTTGAAATCTAATACCAAATAGGAACTAAACTCAAAATTTAAGGCTATAAGGATTTAATGGTTACTAAATTCAAAACTTGGGTAATGTACCATTATGAAACCAAGCCACCAAAGTGGTTTTTTCTATGGCCTTACTTGAACAGGATCTGTTAGGTTGTACAACTGTGACCTTGAGCTCTAAATGGTAACTGTGTGCAAGTACTCCATAAGCATTTAATGTTGTTTTTATTATTATTATTTATTTATTTTTGTTTCATAATCATAGCTTCAAACAAACTGTTTGTAAAAAAAAATATCTTCTGAAGTGTTGACTGAGGGTTTTGTAGATGAGTGGGCTAGTTCTGTTTCTTTTTTCATCGTGTTGGCATGAACTTATATCTTAGTTAGCAAGTTGCAAATTTTCTTGTAAGTAGGACTGAGCTTGAAGTTTGGGTGGTTATGGTATCTCTATAGCCAAAATAATATTCGAGGGTAGTAAAGTATAAAGGGTTACATATCATACTTTATCACAATAATGTGATGTACCCCCATTCATGATGGCATGACTAAAAAAATAGAAATCCATAGACACCTTATGAAGTGCTTTGTATTGGAGTCATTACAGGTGGCTGAATTTTCATGGAAGGATTGCAAAGATTCTACTTTTGTAGCCTTAGCTAGCAAGCTAAGAATGAATGATAAAGATCTTTAATCCAACTTGACTGTTGGAGCTGTAGCATTGGTCAAGTCAATGGGACATCTTCCCATTTTTATTGCATTCATACCCAAATTTTATTTCATACACCTTATTTGTAAATGCCTAATTTCTTCTCTCGATAGATTTTCATGCAGTGATCATTCTATTCCCTGGCATATTTGGTTTTGGTAAATAGAATTCCCTGTGCTATAATTTTATGTATGTATAAACGTACTGTAAGAGCAATTTTCTCTGTACTTCCTTCCCAATCTAGGAACTCAACCAAGATCTGCATTGCTGGACGACCTTCAAGATCAGGAAACTGTAATTCAAGAATGTATTAGGCAACTTGAAGGTGTTGAGGCAACTAGGGCTTCTTTGGTTTCCTTACTTGTAGAAGCGCTTCAGGACCAAGTAACTTTCCTGCATCTTTTATTTTTCCTCCAATAATTTAAACCCATTGCAGGCCTCCTCTATATTGTAGTTGATTACTCTTTGGAAAATCACAGGAATCCAAGCTGGAACTAGTTCGCAATCAGTTGCAGGTAAGATTAACCACTTTGTATATTTTCTGTTTTTCAAGTAACTAACAAGAGTTTAGGTTTGGGATCAACTGTTGGCTTAAATTAGTTTTGGATGGGTCTGACATGCGCTTTATACCTTGAAACGTTTGAATATGGTATAGGATAATTGGATATGTCAAAACATTGAACTTTGGTACACCTAGAAGCATTTAAATCAGAGTTATAATCTTCTTTCATTGTAGACACATGGTGGAGGTGGACAGACACCCTTTGACTCTTGAGCAAATTAACACAATAATATACTAACTAATAGGGTACAATCCATGGTGGCCACCTACCTAAGAGTTAATTTTGTATGAGTTTTCTTAACACCCAAATGTTGTAGGGTTAGTCAGGTTGTCTCGTGAGATTAGTCAAAGTGCACGTAAACCAAATGTTGTAGGGTTAGTCAGGTCGTCTCGTGAGATTAGTCAAAGTGCACGTAAGCCAAATGTTGTAGGATTAGTCAGGTCATCTCGTGAGATTAGTCAAAGTGCACGTAAACCAAATGTTGTAGGGTTAGTCAGGTTGTCTCGTGAGATTAGTCAAAGTGCACGTAAGCTGGTTCGAATACTCGTAGATATTAAGAAAGAAAAAAACAATAATATACTTAAACAAGAAATGGGAGAAAAATCAGACTGAATGAACTTGTTTGATGTGCTAACTATGTGGGCACATTTGATTTTGACGTTCTTTCTAAGATATTTGATTTCTTTAGAAAGTTACAAATAATGGTGAACTTAAACCCATTGATCTTTGGAATCCGCTTCAAGATACAATAACTAGTTACCAATCTTTGGATGAAGGCCCTCGTAGTTTTTAGCCTTAAATTTTCTTTGTATCATCATTTAGATATTAGTGCTTGATCGATATTGTTAGTAAGGAAAAAGATACAGTGAAAATCATTCATATTTTTCATTAATGTAAATTCAAGTATGGAACTTATGCTTGATTGGCTTCTATGCTAGATTTCAATGCTTTAGTCTGCATCTAGATAAGAAAAAGATGAAGCTATTGTTTGCCTCGTATCCACTAACATCACTTCTGCTCGTTCATGTGTTATGAATGAGTTTCAATGTCAACATTACAGTTCAATCGAGTAGGAGTTCAATCATTTGGGAAATCCACTTTCAGCAACCAGTGAAACATTTTATGTCAATTTGCTCAGTCATTGGTAGCCTATTTTAGGCTGTAGTAATTAAATTGTACTGTAACTTTCTTTTTTATGTGAACGGATAAGAAATTGGGTCATGTCTAATAAAATTTTTAGACACTGTTTTGTTAGGAAAATTTCTGAGAACGCTTTCTATTATAAATGCATTATTAGATTAAACTTCAGTTGGAACCACCTGAATTAGAACTAATGAGGTGGCTTTTTGCAAAGGTAGTCTTGTAAATCGGAAAGGGTAACATACGTAAAAGATTATCATGGTCAAGAACTTAATTCAGGGGAGAGAGCACAGTTGATAGAGATGGACAGTCAGTATCTGATATATATTAAAAACATAGCAGTAAACATAAATTAAAACGAACAAATATAATTAAGTTCTAATTCAGAAGGTTCCCTGCCAGTCACATGGACGGAGATCTCATATTAAATATATTTTATATGCTTGGAATGCAAAATGATTAGTTATAGAGTTCTGTATTTTCTAACTTCAGTTTGCTTATGTAGATCGGAAATTATTGTTTATGAACCTGTAGGTGGCTCGATCTCAAATTGAGCTAGCAAGTAATGTTCGGAAAAGATTTACTTCGACAACGGTTCCTGGTCCTTCAGCTACTACTGTTGATCTTCTGACAGAGATGACCCATGCGACGGATTCTAAGTTATCTTCTGTTCAACAAAACATAATCTCTTCTCAGTCCCCTCTTATCCAGGCTATGGGGTCGTTTCCTGGTCCTAAAACCAGTGAAGAGGAAAACAAGAGAGCTGCTGCCGCTGCTGTTGCTGCAAAGTTGGCTGCTTCTACATCATCGGCACAGATGCTTACCTCTGTTCTTTCATCACTCGTTGCAGAAGAAGCTGCTTCCATGAATGGTGGCCTAAAATCATCTGGGTTCTCTTCATTGTCCCTATTCTCTCCTGAAAAACGACAGAAACTTGAGAAGCCCATGCCTATTTCTGATGTCAGCAGTTCAGATGGCGCTGGCGCATCATTTGTTGCACCTATGCAACAACAAATGACGAGTATGCCACTTGCACAATCAGCAAATGGGCAACCTGTATCCCAGGCAAACCCGAGTCAAGCTTCATTTGCGCCACCACCTCCGCCAGTGCCACCATCTCTATCCTCAACTCCACCAGTGAATCAATATGCACAGTCTGGTGGATTAATGGGTGTATTACCATATAATTTCGGAGCATATTCTCTACCACCTCCACCTCCTTTGCCTCCACATATTGCGATGGGTTTGAGTAGGCCGACATCTCAGCCACCTCCGCAACAGCTGCAGCAGCCACAGCAGTCACAGCCAGCTTCATCAGGATTTTATCGACCACCAGGTATAGGCTTTTATGGGCAAGGCCAGCAGTCGACGCCACCCCCGGTCCCTAGGCAGTAAGTTCCCAGGTAGAATTTACTTGGGTCAAACTTTCACTTAAAAGGGTTAAATATCTTCAATGGTTTACATTAGCCATACACATTTCTACCTGCCAACTGAGTTCATTTCAGAATTTGTATTATCATGTAAATTAGTAGATTATTTTTTTTTTTTCGTTAGTTAATTTGTAGAAGGTTTAGTATATCTTCTCCGGCCAACAATTTTAAAGAGCATGTTGCAGCTGAGGTTCGTCTGTGCTGATGGAAAATTTAGGTGGCTACATTTAGGCTTTTCCAATGTGTTACTATAAAAGTCCGGAAGCTCGACGAATTCTCGACTACGTCAAAATTTTACTGTGGCTAGGTAAGCTTTTCTCCCATATGTTTGGAAGCTTGTTAGCGTACTGCCTAGAAAGATTTTTAGTTGACATGTTAGATTCAGCTTTGAAGACCTTGTTGCCCTTTAAAATCTGCATGGATAGAGTGGCCAACTACACTTATTTTGGATAGCAATAACAGGATGATACTGGTCTGTAATATAAATTTAGTGATAGGCCATGGAAATTATAAGTTAAAATACATCAGTGCCACTGTTTTGTAATCTGTACCCCTTGTTTTCTTATTCAGTAGAGAACTTTTATTTTACAATAAATTGTTCCTCAA

Coding sequence (CDS)

TTATCAAAATGGTGCATTTCCCACCGGAAAAAGGCCAAGCAGATTGTCGAAACATGGGATAAATTATTCAACTCATCGCAGAAAGAGCAGCGTGTTTCATTTCTGTATTTGGCAAATGATATTTTGCAAAACAGCAGGCGCAAGGGAAGTGAATTTGTGAACGAATTCTGGAAAGTTCTTCCTGGTGCCCTCAAGTATGTATACGATCATGGCGACGAAAGTGGAAAGAAAGCAGTTGCCAGACTTGTCAATATTTGGGAAGAAAGGAAGGTTTTTGGTTCTCGGGGGCAGAGTCTTAAGGATGAAATGCTTGGTAAAAATCCACCTCCAACTCCGTTACCCAGCAGCAATGGAAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCTCACTCTGTGAGAATTAAACTGGCTGTTGGAGGTGTTCCAGAGAAGATTCTTACTGCATTTCAATCTGTCCTTGATGAGCATCTGAATGAAGATGCTGCTCTGATCAACTGTAGCTCTGCTACTCATCATCTGAATCAAATTGAGGAGGACTTGAATGTCTCCTTAGCTCAAGGAACTCAACCAAGATCTGCATTGCTGGACGACCTTCAAGATCAGGAAACTGTAATTCAAGAATGTATTAGGCAACTTGAAGGTGTTGAGGCAACTAGGGCTTCTTTGGTTTCCTTACTTGTAGAAGCGCTTCAGGACCAAGAATCCAAGCTGGAACTAGTTCGCAATCAGTTGCAGGTAAGATTAACCACTTTGTATATTTTCTGTTTTTCAAGTAACTAA

Protein sequence

LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEEDLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLELVRNQLQVRLTTLYIFCFSSN

Homology

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 86/265 (32.45%), Postives = 126/265 (47.55%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS W I HRK A  IV  W +    ++  ++++FLYLAND++QNS+RKG EF  EF  VL
Sbjct: 26  LSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTREFESVL 85

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRG-QSLKDEML-GKNPPPTPLPSSNG 120
             A  +V    DE  KK + RL+NIW+ER V+G    Q LK  M   K+PPP        
Sbjct: 86  VDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLSMEDSKSPPP-------- 145

Query: 121 KSSNPIKIVKRDAHSVRIKL---AVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHL 180
           K++   K +KR    ++ +      G    +  +A   + +E +     L N +S    +
Sbjct: 146 KAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKALQDLENAASGDATV 205

Query: 181 NQIEEDLNVSLAQGTQPRSALLDDLQDQE-------TVIQECI------RQLEGVEATRA 240
            Q       SL Q  Q  S LL+ + D+E       TV + C+       +L      R 
Sbjct: 206 RQ----KIASLPQEVQDVS-LLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRR 265

Query: 241 SLVSLLVEALQDQESKLELVRNQLQ 248
            L  +LVE  Q+Q+  L     +L+
Sbjct: 266 QLARMLVEYTQNQKEVLSEKEKKLE 277

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-19
Identity = 82/258 (31.78%), Postives = 128/258 (49.61%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS W I HRK A  IV  W +    ++  ++++FLYLAND++QNS+RKG EF  EF  VL
Sbjct: 26  LSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTREFESVL 85

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRG-QSLKDEML-GKNPPP--TPLPSS 120
             A  +V    DE  KK + RL+NIW+ER V+G    Q LK  M   K+PPP  T    S
Sbjct: 86  VDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLSMEDSKSPPPKATEEKKS 145

Query: 121 NGKSSNPIKIVKRD----AHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSAT 180
             ++   I+  + D    ++S +   A   + E+++ A Q +      E+AA  + +   
Sbjct: 146 LKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKALQDL------ENAASGDATVRQ 205

Query: 181 HHLNQIEEDLNVSLAQGTQPRSA---LLDDLQDQETVIQECIRQLEGVEATRASLVSLLV 240
              +  +E  +VSL +    + A   L   + +   ++ E   +L      R  L  +LV
Sbjct: 206 KIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLV 265

Query: 241 EALQDQESKLELVRNQLQ 248
           E  Q+Q+  L     +L+
Sbjct: 266 EYTQNQKDVLSEKEKKLE 277

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 77/269 (28.62%), Postives = 132/269 (49.07%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS W I HRK ++ IV  W++    ++  ++++FLYLAND++QNS+RKG EF  +F  V+
Sbjct: 26  LSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVI 85

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRG-QSLKDEMLGKNPP---------- 120
             A K+V    DES KK + R+++IWEER V+ +   + LK  + G   P          
Sbjct: 86  VEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKV 145

Query: 121 -PTPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGG---VPEKILTAFQSVLDEHLNEDAAL 180
                 SS G  S P + +        ++ A  G   V ++I +    V +  L +    
Sbjct: 146 DENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDK--- 205

Query: 181 INCSSATHHLNQIEEDLNVSLAQGTQPRSALLDDLQDQETVIQECIR-QLEGVEATRASL 240
           I    +   L+++ ED  + LA      +A +DD +    ++ + +R Q E +      L
Sbjct: 206 ITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKL 265

Query: 241 VSLLVEALQDQESKLELVRNQLQVRLTTL 254
                E  + + +++ LVR +L+ R+ +L
Sbjct: 266 -----EEYKRKLARVSLVRKELRSRIQSL 286

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 77/269 (28.62%), Postives = 132/269 (49.07%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS W I HRK ++ IV  W++    ++  ++++FLYLAND++QNS+RKG EF  +F  V+
Sbjct: 26  LSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVI 85

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRG-QSLKDEMLGKNPP---------- 120
             A K+V    DES KK + R+++IWEER V+ +   + LK  + G   P          
Sbjct: 86  VEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKV 145

Query: 121 -PTPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGG---VPEKILTAFQSVLDEHLNEDAAL 180
                 SS G  S P + +        ++ A  G   V ++I +    V +  L +    
Sbjct: 146 DENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDK--- 205

Query: 181 INCSSATHHLNQIEEDLNVSLAQGTQPRSALLDDLQDQETVIQECIR-QLEGVEATRASL 240
           I    +   L+++ ED  + LA      +A +DD +    ++ + +R Q E +      L
Sbjct: 206 ITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKL 265

Query: 241 VSLLVEALQDQESKLELVRNQLQVRLTTL 254
                E  + + +++ LVR +L+ R+ +L
Sbjct: 266 -----EEYKRKLARVSLVRKELRSRIQSL 286

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 77/269 (28.62%), Postives = 132/269 (49.07%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS W I HRK ++ IV  W++    ++  ++++FLYLAND++QNS+RKG EF  +F  V+
Sbjct: 26  LSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVI 85

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRG-QSLKDEMLGKNPP---------- 120
             A K+V    DES KK + R+++IWEER V+ +   + LK  + G   P          
Sbjct: 86  VEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKV 145

Query: 121 -PTPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGG---VPEKILTAFQSVLDEHLNEDAAL 180
                 SS G  S P + +        ++ A  G   V ++I +    V +  L +    
Sbjct: 146 DENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDK--- 205

Query: 181 INCSSATHHLNQIEEDLNVSLAQGTQPRSALLDDLQDQETVIQECIR-QLEGVEATRASL 240
           I    +   L+++ ED  + LA      +A +DD +    ++ + +R Q E +      L
Sbjct: 206 ITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKL 265

Query: 241 VSLLVEALQDQESKLELVRNQLQVRLTTL 254
                E  + + +++ LVR +L+ R+ +L
Sbjct: 266 -----EEYKRKLARVSLVRKELRSRIQSL 286

[Close]

BLAST of Cucsat.G13186.T3 vs. NCBI nr
Match: XP_004136608.1 (regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis sativus] >XP_031739391.1 regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis sativus] >KAE8651160.1 hypothetical protein Csa_001803 [Cucumis sativus])

HSP 1 Score: 486 bits (1250), Expect = 6.94e-168
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS
Sbjct: 88  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQV
Sbjct: 268 LVRNQLQV 275

[Close]

BLAST of Cucsat.G13186.T3 vs. NCBI nr
Match: XP_008443180.1 (PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucumis melo])

HSP 1 Score: 481 bits (1239), Expect = 3.03e-166
Identity = 246/248 (99.19%), Postives = 246/248 (99.19%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS
Sbjct: 88  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLNVSLAQGTQPRS LLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNVSLAQGTQPRSGLLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQV
Sbjct: 268 LVRNQLQV 275

[Close]

BLAST of Cucsat.G13186.T3 vs. NCBI nr
Match: XP_038904543.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Benincasa hispida])

HSP 1 Score: 459 bits (1180), Expect = 2.95e-157
Identity = 234/248 (94.35%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDK FNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKSFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGDE GKKAVARLVNIWEERKVFGSRGQSLKDEMLGK PPPT LPSSNGKS
Sbjct: 88  PGALKYVYDHGDEGGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKTPPPTQLPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATH+LNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHNLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN SLAQGTQPRS LLDDLQ+QE VIQECIRQLE VEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNASLAQGTQPRSGLLDDLQEQENVIQECIRQLESVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVR+QLQ+
Sbjct: 268 LVRSQLQI 275

[Close]

BLAST of Cucsat.G13186.T3 vs. NCBI nr
Match: XP_022152017.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Momordica charantia] >XP_022152018.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Momordica charantia])

HSP 1 Score: 454 bits (1168), Expect = 1.70e-155
Identity = 232/248 (93.55%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGD+SGKKAVARLV+IWEERKVFGSRGQSLKDEMLGKNPPP  LPSSNGKS
Sbjct: 88  PGALKYVYDHGDDSGKKAVARLVDIWEERKVFGSRGQSLKDEMLGKNPPP--LPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNED AL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDTALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN +LAQGTQPRSALLDDLQ+QE+VIQ+CI QLE VEATR SLVSLLVEALQDQESKLE
Sbjct: 208 DLNATLAQGTQPRSALLDDLQEQESVIQQCIGQLESVEATRGSLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 273

[Close]

BLAST of Cucsat.G13186.T3 vs. NCBI nr
Match: XP_022971617.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima] >XP_022971618.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima])

HSP 1 Score: 452 bits (1163), Expect = 8.04e-155
Identity = 231/248 (93.15%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           P +LKYVYDHGDESGKKAVARLV+IWEERKVFGSRGQSLKDEMLGKNPPP  LP+SNGKS
Sbjct: 88  PVSLKYVYDHGDESGKKAVARLVDIWEERKVFGSRGQSLKDEMLGKNPPP--LPNSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN S+AQGTQPRSALLDDLQ+QE V+Q+CI QLE VEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 273

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL
Match: A0A1S3B7H0 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103486842 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.47e-166
Identity = 246/248 (99.19%), Postives = 246/248 (99.19%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS
Sbjct: 88  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLNVSLAQGTQPRS LLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNVSLAQGTQPRSGLLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQV
Sbjct: 268 LVRNQLQV 275

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL
Match: A0A6J1DF20 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111019832 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 8.25e-156
Identity = 232/248 (93.55%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYDHGD+SGKKAVARLV+IWEERKVFGSRGQSLKDEMLGKNPPP  LPSSNGKS
Sbjct: 88  PGALKYVYDHGDDSGKKAVARLVDIWEERKVFGSRGQSLKDEMLGKNPPP--LPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNED AL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDTALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN +LAQGTQPRSALLDDLQ+QE+VIQ+CI QLE VEATR SLVSLLVEALQDQESKLE
Sbjct: 208 DLNATLAQGTQPRSALLDDLQEQESVIQQCIGQLESVEATRGSLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 273

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL
Match: A0A6J1I2G4 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111470291 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 3.89e-155
Identity = 231/248 (93.15%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           P +LKYVYDHGDESGKKAVARLV+IWEERKVFGSRGQSLKDEMLGKNPPP  LP+SNGKS
Sbjct: 88  PVSLKYVYDHGDESGKKAVARLVDIWEERKVFGSRGQSLKDEMLGKNPPP--LPNSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN S+AQGTQPRSALLDDLQ+QE V+Q+CI QLE VEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 273

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL
Match: A0A6J1FGC3 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111445436 PE=4 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 1.04e-154
Identity = 230/248 (92.74%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQK+QRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQKDQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           P +LKYVYDHGDESGKKAVARLV+IWEERKVFGSRGQSLKDEMLGKNPPP  LP+SNGKS
Sbjct: 88  PVSLKYVYDHGDESGKKAVARLVDIWEERKVFGSRGQSLKDEMLGKNPPP--LPNSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAAL NCSSATHHLNQIEE
Sbjct: 148 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN S+AQGTQPRSALLDDLQ+QE V+Q+CI QLE VEATRASLVSLLVEALQDQESKLE
Sbjct: 208 DLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASLVSLLVEALQDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 273

[Close]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL
Match: A0A6J1J690 (regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481606 PE=4 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 1.35e-154
Identity = 230/248 (92.74%), Postives = 237/248 (95.56%), Query Frame = 0


Query: 1   LSKWCISHRKKAKQIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 60
           LS+WCISHRKKAKQIVETWDKLFNSSQ+EQRVSFLYLANDILQNSRRKGSEFVNEFWKVL
Sbjct: 28  LSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLANDILQNSRRKGSEFVNEFWKVL 87

Query: 61  PGALKYVYDHGDESGKKAVARLVNIWEERKVFGSRGQSLKDEMLGKNPPPTPLPSSNGKS 120
           PGALKYVYD GDESGKKA ARLVNIWEERKVFGSRGQ+LKDEMLGK PPPTPLPSSNGKS
Sbjct: 88  PGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRGQNLKDEMLGKYPPPTPLPSSNGKS 147

Query: 121 SNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALINCSSATHHLNQIEE 180
           SNP KIVKRDAHSVRIKLAVGGVPE+ILTAFQSVLDEHL EDAAL +CSSATHHLNQIEE
Sbjct: 148 SNPKKIVKRDAHSVRIKLAVGGVPERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEE 207

Query: 181 DLNVSLAQGTQPRSALLDDLQDQETVIQECIRQLEGVEATRASLVSLLVEALQDQESKLE 240
           DLN SLAQGTQPRSALLDDLQ+QE VIQ CIRQLE VEATRASLVSLLVEAL DQESKLE
Sbjct: 208 DLNASLAQGTQPRSALLDDLQEQENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLE 267

Query: 241 LVRNQLQV 248
           LVRNQLQ+
Sbjct: 268 LVRNQLQI 275

The following BLAST results are available for this feature:

BLAST of Cucsat.G13186.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CSU0	2.5e-19	32.45	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q9NQG5	3.2e-19	31.78	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q0P5J9	8.0e-18	28.62	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	8.0e-18	28.62	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	8.0e-18	28.62	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of Cucsat.G13186.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136608.1	6.94e-168	100.00	regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis sativus] >X...	[more]
XP_008443180.1	3.03e-166	99.19	PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cuc...	[more]
XP_038904543.1	2.95e-157	94.35	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Benincasa hisp...	[more]
XP_022152017.1	1.70e-155	93.55	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Momordica char...	[more]
XP_022971617.1	8.04e-155	93.15	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxi...	[more]

BLAST of Cucsat.G13186.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7H0	1.47e-166	99.19	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucumis melo...	[more]
A0A6J1DF20	8.25e-156	93.55	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica ch...	[more]
A0A6J1I2G4	3.89e-155	93.15	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita ma...	[more]
A0A6J1FGC3	1.04e-154	92.74	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita mo...	[more]
A0A6J1J690	1.35e-154	92.74	regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=C...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 200..220
None	No IPR available	COILS	Coil	Coil	coord: 225..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..122
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR12460:SF21	RNA POLYMERASE II-BINDING DOMAIN PROTEIN	coord: 1..248
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 1..104 e-value: 1.25115E-50 score: 160.054
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 1..104 e-value: 6.2E-26 score: 102.2
IPR006569	CID domain	PFAM	PF04818	CID	coord: 1..94 e-value: 5.4E-30 score: 104.1
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 1..108 score: 39.796963
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 1..104 e-value: 1.8E-33 score: 117.3
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 1..95

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13186	Cucsat.G13186	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13186.T3.E1	Cucsat.G13186.T3.E1	exon
Cucsat.G13186.T3.E2	Cucsat.G13186.T3.E2	exon
Cucsat.G13186.T3.E3	Cucsat.G13186.T3.E3	exon
Cucsat.G13186.T3.E4	Cucsat.G13186.T3.E4	exon
Cucsat.G13186.T3.E5	Cucsat.G13186.T3.E5	exon
Cucsat.G13186.T3.E6	Cucsat.G13186.T3.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13186.T3.C1	Cucsat.G13186.T3.C1	CDS
Cucsat.G13186.T3.C2	Cucsat.G13186.T3.C2	CDS
Cucsat.G13186.T3.C3	Cucsat.G13186.T3.C3	CDS
Cucsat.G13186.T3.C4	Cucsat.G13186.T3.C4	CDS
Cucsat.G13186.T3.C5	Cucsat.G13186.T3.C5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13186.T3	Cucsat.G13186.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0016591	RNA polymerase II, holoenzyme
molecular_function	GO:0000993	RNA polymerase II complex binding