Cucsat.G13.T4 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13.T4
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Locationctg1: 230648 .. 234638 (-)
RNA-Seq ExpressionCucsat.G13.T4
SyntenyCucsat.G13.T4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTTGGATTTTGAGACCTCTTATTTCAAGCCCCTCCTTTGTTGATATTCGTAAGCCCAATTATGATCTCAACTTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGAATCGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGTTTGATTTTATTTTTTCCGTTGGAGTTCTTTTCGTGTTTGTATTTTCTATCATTCCGCTTGTTTTTCAATCCTAAGCTTGTTATTTATAATTGAATTTTGAGGTTTGAGCTGTAGCGCGTTTCAGTATTTTTGTTGACAGACTTGAGAATGCAATTTATCTAACTGTGCTTCGTGAAGTTTACGATATTGGATTGAAGACATTGTGATTTGATTAGTTTAGGAACGCGATGCATTTAATGTGGAGATCTATGGACATTTTCAGTTTTAATGTCTGGGAATTTGCTAATGTTATAATTTGTTATCCGTTCAATCTTGTCAACTTGTTTGTTTTGAAACAATCGTGTTTCCATCATGCGTGTACTTTTCAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAGTGAGTAGTATTTTCCAGCTCGATTCAGCATTAGACAGTGTTAATTTGGCTCAAATCATCTTACAAAAAAAAAAAAAAAGGCTCAAATCATTCATTCCATATGATTGTTTGCAACTGTTATGGCTGTCATGGGGATCATATTTATTTGCGTTTATGTTCTTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTATAATTAATTCATCCCCCGATATTCAAATATTCCCTTAATTTTTTTTTTAGCTAATGAGTTGCTGAGAGAATATTGTGAAATGCTTTATACCTCTTCTCATCAATAACGGGTAGGGGAATAAGTTTGCTATTGTATGGTAAGGTTTGCTTTATAAAACATCGTTGCATGAGCAGTTTTGAGGATGTTGCTTGGACCATTGACTGTTATGTGATATAGGAATCTAAGGATTAGAAGCTTGAGCAACCACTAAGCTATTGACAATTAGAAAGAATGGTTCTCTTATTGAAACCAAAGAAAAAAAAGGTTATACACTCCAAACTAACAGTAAGATGGGTGTATGTGCTGGTAAATTTTATTGCCGCTCCATCCAATGAAACTGGGTAATCGTAAATATATTTGCATTGCAACTTCATCCAACATGGTGCTCATGCTGCCAATTGATTCATATATGGACCATGGTTTAACCGTTGGAACTTGGAGATCATCGAACAAGCTCTTGTCTATAATATGACTCTGGATGTGAGGGAACTAAAGAAGTGTTATGTATATCATAGCAAGTTGAAAGCAACTACTCATTGGTAAAATCGGTCTTATTCTAGGAATCATGGTAAATGTACTACATTAGGCGTTAGCACATGCAAATGGGAGAAGTTGATTTACTCTATTGTGAATGATTGTTGCATGCTTGAGGTGTCGGCATCCAACTAATATAGGATATTGACGTAGATGAACTTGTGTAGTGGCACCCTTTCTTATACAAGACCATGTTTTCCTTGACAATATGTGGAGTGGGGGGGGAAACCTCTGGCCTTGAGGTCAATAGAGTTTTATGCCAGTTTTTCTCAAATCTAATATCACCCCTAATTCTAACTAAAATGTTGTGTGGCATAGTTATAGTTCTTAACTGGCAAATTTTCATGACTGTATCTATTTCTTTGGGCTCATTAAATCACATTTCTCATTTGGCCCATGTTAAATGCCAATTTTGATGTAGGGCTTTACCAAGGTTATCCATGTTCAATTATTCGTTTCAAGTTATCCAACTACTGAGAGTGATTCTTATGTTTTCTAAAAGGCCAATATCACTCAATATGCATCTTGAAGTCTAGCTAAAATATAAGAGCAGTAAAATAGTCTTATTTATCATTATAGCCTAGCCTCAATTTCTGTTCATCTTATTTCAGTTGTTTTCTCCAATTGATTACTTTCCTTCCCTTGTGTACTACTTATTAAGATGCTTCGGATTACACTTTTAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTATTATGTTCTTCTAAATGTTCTTCTAAATGTGTCTATATGTTTGCAGTTCTTTAAAAAGTTTGTTATCTTATGGTCATGTAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTCTCATCGCAAGCATAATTTCTGATGAACTATTAAAAATATGTCATTTCATTTAAAATTTTAAATATCAGTGTCTTGATGAATCCCCCTACTGCAGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTAGAATTCTCATTTATTTGCATATAACCTCATCGATCATATTGCATTTATTTTATCTCTTGACCATAAACATAACACCACTTTCACCCAAAGAAATGATATTAGTGAGGAATGAATGTTCTGCTTCGATTGAGGAGGTGCTCCTAGGTTTGCCAATTTGGAAGGAAGGAAAAGTTTTGTGGCCCACTAGTTTCTTTGCTATCTTCAATCTCGTGGGGGGTTTGGCTTGAGAGAGACAATAGGATTTCTTAGAGAGATGTGCGGGAGGAGGTGAGGTTTAACTAACACCTAGTTGAGGGCATCCATCACTGGACCTTTTTGTAATTTCCTCGATTGGTAGTGATTTTTGGCTTGGATGCCCTTGTTGTAGGTTTTTTTGGACTTTTTTTTTGTTGGCCATTGTTTTCTTGCTGAAATCTCGGTTTCTTACCAAAAGATTAAAAAATACAGCAGTAAAGAGTTGGGGTAGTTTTAAACAGTGATTTGTTATAAATAGAATGAGCATAAAAAGTTAAATGTATCAATTATTTTGTTGGTTTTTGTTGGATTAGGGCTTAAGTAATCTCAATAACTAACTAAGAGCTCATGGGTTCAATACATGGTTGTTCTGTGAGATTAGTCGAGATGTGCATAAACCGATTCGGACATTTACGGATTAAAAAAAATTAGTGCTCGAGTGGGGAAGATTCTCGGAACCTCAAATACTCGAGGGTGTTTTATTTTATATTAGGCAACTACATATAATAACATGAAATTACTATCTATCACCACAATCATGGCTCTGCACAAATGAGAGAGTATGGTGATTCGTAGGTAAATTTTAATGATGAACTGCAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGAATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTTGTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTATTTTTTACTTAGAATTAAGATATTCTATAGATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGCTAAAAAAAAATGAAACTTTCAGGATATATCAAAACTTTGAATATGAATTTCAAAGTGCATATAAATTACAT

Coding sequence (CDS)

ATGGAACCGGAAGGAATCGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGTGTCTTGA

Protein sequence

MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFVS
Homology
BLAST of Cucsat.G13.T4 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPF 139
            FWR  +A +   LVQPF
Sbjct: 121 CFWRTPIAIIAKQLVQPF 138

BLAST of Cucsat.G13.T4 vs. NCBI nr
Match: XP_004146176.1 (uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_010199 [Cucumis sativus])

HSP 1 Score: 264 bits (675), Expect = 3.27e-88
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 121 WFWRASVATVPHHLVQPF 138

BLAST of Cucsat.G13.T4 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 249 bits (637), Expect = 2.16e-82
Identity = 130/138 (94.20%), Postives = 135/138 (97.83%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLL+SKVII+IVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 123 WFWRASVATVPHHLVQPF 140

BLAST of Cucsat.G13.T4 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima])

HSP 1 Score: 232 bits (592), Expect = 1.65e-75
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0

Query: 2   EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
           E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCW 121
           LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLL+SKV ++I LV W
Sbjct: 66  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLVFW 125

Query: 122 FWRASVATVPHHLVQPF 138
           FWR SVATVPHHLVQPF
Sbjct: 126 FWRVSVATVPHHLVQPF 142

BLAST of Cucsat.G13.T4 vs. NCBI nr
Match: KAG6596276.1 (hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027827.1 hypothetical protein SDJN02_09004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231 bits (590), Expect = 2.91e-75
Identity = 120/138 (86.96%), Postives = 131/138 (94.93%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 121 WFWRASVATVPHHLVQPF 138

BLAST of Cucsat.G13.T4 vs. NCBI nr
Match: XP_038904813.1 (uncharacterized protein LOC120091071 [Benincasa hispida])

HSP 1 Score: 231 bits (590), Expect = 2.91e-75
Identity = 119/138 (86.23%), Postives = 130/138 (94.20%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E I+E++SSIAAPFIF IVIGFQFLAKWLEHLKK GSNSQ+EMELRKSIKQLL+EAS
Sbjct: 1   MEAERIIENQSSIAAPFIFLIVIGFQFLAKWLEHLKKGGSNSQMEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNK++KTSYGLY +VLL+SKV I+I+LVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKQMKTSYGLYGRVLLISKVFIYIILVC 120

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWR SVATVP HLVQPF
Sbjct: 121 WFWRVSVATVPRHLVQPF 138

BLAST of Cucsat.G13.T4 vs. ExPASy TrEMBL
Match: A0A0A0L4T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1)

HSP 1 Score: 264 bits (675), Expect = 1.58e-88
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 121 WFWRASVATVPHHLVQPF 138

BLAST of Cucsat.G13.T4 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.05e-82
Identity = 130/138 (94.20%), Postives = 135/138 (97.83%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLL+SKVII+IVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 123 WFWRASVATVPHHLVQPF 140

BLAST of Cucsat.G13.T4 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 7.99e-76
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0

Query: 2   EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
           E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCW 121
           LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLL+SKV ++I LV W
Sbjct: 66  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLVFW 125

Query: 122 FWRASVATVPHHLVQPF 138
           FWR SVATVPHHLVQPF
Sbjct: 126 FWRVSVATVPHHLVQPF 142

BLAST of Cucsat.G13.T4 vs. ExPASy TrEMBL
Match: A0A6J1E9M6 (uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC111431128 PE=3 SV=1)

HSP 1 Score: 231 bits (590), Expect = 1.51e-75
Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 0

Query: 2   EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
           E EGIVEHRSSIAAP IF +VI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63

Query: 62  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCW 121
           LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLL+SKV ++I L+ W
Sbjct: 64  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALIFW 123

Query: 122 FWRASVATVPHHLVQPF 138
           FWR SVATVPHHLVQPF
Sbjct: 124 FWRVSVATVPHHLVQPF 140

BLAST of Cucsat.G13.T4 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1)

HSP 1 Score: 231 bits (589), Expect = 2.00e-75
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRSKKVKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPF 138
           WFWRASVATVPHHLVQPF
Sbjct: 121 WFWRASVATVPHHLVQPF 138

BLAST of Cucsat.G13.T4 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 154.1 bits (388), Expect = 8.5e-38
Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 0

Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPF 139
            FWR  +A +   LVQPF
Sbjct: 121 CFWRTPIAIIAKQLVQPF 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q1H5D21.2e-3658.70Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_004146176.13.27e-88100.00uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical ... [more]
XP_008448478.12.16e-8294.20PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo][more]
XP_023007643.11.65e-7589.05uncharacterized protein LOC111500212 [Cucurbita maxima][more]
KAG6596276.12.91e-7586.96hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038904813.12.91e-7586.23uncharacterized protein LOC120091071 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0L4T91.58e-88100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1[more]
A0A1S3BKE11.05e-8294.20uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=... [more]
A0A6J1L8847.99e-7689.05uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212... [more]
A0A6J1E9M61.51e-7587.59uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1I7A92.00e-7586.23uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261... [more]
Match NameE-valueIdentityDescription
AT4G16444.18.5e-3858.70FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..94
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 11..138
NoneNo IPR availablePANTHERPTHR11760:SF44BNAC07G33680D PROTEINcoord: 11..138
IPR028945Get1 familyPFAMPF04420CHD5coord: 28..138
e-value: 2.9E-9
score: 37.0

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13Cucsat.G13gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13.T4.E1Cucsat.G13.T4.E1exon
Cucsat.G13.T4.E2Cucsat.G13.T4.E2exon
Cucsat.G13.T4.E3Cucsat.G13.T4.E3exon
Cucsat.G13.T4.E4Cucsat.G13.T4.E4exon
Cucsat.G13.T4.E5Cucsat.G13.T4.E5exon
Cucsat.G13.T4.E6Cucsat.G13.T4.E6exon
Cucsat.G13.T4.E7Cucsat.G13.T4.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13.T4.C6Cucsat.G13.T4.C6CDS
Cucsat.G13.T4.C5Cucsat.G13.T4.C5CDS
Cucsat.G13.T4.C4Cucsat.G13.T4.C4CDS
Cucsat.G13.T4.C3Cucsat.G13.T4.C3CDS
Cucsat.G13.T4.C2Cucsat.G13.T4.C2CDS
Cucsat.G13.T4.C1Cucsat.G13.T4.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13.T4Cucsat.G13.T4-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071816 tail-anchored membrane protein insertion into ER membrane
biological_process GO:0048767 root hair elongation
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0043529 GET complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0043621 protein self-association