
Csor.00g194700.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATATGATACTCTCTCTTTCTACTGGCTTACCCCTAGAAGAATCAGGAAGAGGATGGCCGAGCAAGGCGTTTATGGCCCCGACCCACGACCCTTCACTGGAAACATCCTCGATGTCGTAGAGCTTGTGAAGAAATCCACGGCTAACGACATGAGCTCCATCAGTCATGACATCGTTGATCGTTTGTTACCCTATTACTCTGCATGGACAAAGCAATACGGTACTACTAACGCTTTTATCCTGTTTAAAAGAGTTCATGATTCATTGGTTAGAAAAATATCTAGTATGATTGAGGATATTAAGCCTTTCATTACCTATAGGTACCATATTTGGATCTTTGTTAGACAAATATCTATTATCAATCTTTGCGTGACATTTACTTATTGTTAATTTTATTTTGTAATTTATTTGATTTTGTAAATAATTATAAACAGAGAACTTCATTCACTCTAATTAAGATGTGGTGGTTTTAGTAAATATTTTTGTAAACTACGAATAAACAATTAACCCGTAAACTTAAACTTATTCAGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTGTGTTTGACGGAGATGGAGTTGGTGAAGGAAGTATTGGGGAAGGGCAGCAATGTGTGTGGGAGGTCATGGATGCAAAGACAAGGGACCAAACACTTCATAGGGAAGGGATTGTTGATGGCAAATGGAGAAGCTTGGCATCATCAACGTCACCTGATTTCACCTGCGTTTAGAGGGGAAAGGCTCAAGGTTCATATTCAAACCTGA ATGGCATATGATACTCTCTCTTTCTACTGGCTTACCCCTAGAAGAATCAGGAAGAGGATGGCCGAGCAAGGCGTTTATGGCCCCGACCCACGACCCTTCACTGGAAACATCCTCGATGTCGTAGAGCTTGTGAAGAAATCCACGGCTAACGACATGAGCTCCATCAGTCATGACATCGTTGATCGTTTGTTACCCTATTACTCTGCATGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTGTGTTTGACGGAGATGGAGTTGGTGAAGGAAGTATTGGGGAAGGGCAGCAATGTGTGTGGGAGGTCATGGATGCAAAGACAAGGGACCAAACACTTCATAGGGAAGGGATTGTTGATGGCAAATGGAGAAGCTTGGCATCATCAACGTCACCTGATTTCACCTGCGTTTAGAGGGGAAAGGCTCAAGGTTCATATTCAAACCTGA ATGGCATATGATACTCTCTCTTTCTACTGGCTTACCCCTAGAAGAATCAGGAAGAGGATGGCCGAGCAAGGCGTTTATGGCCCCGACCCACGACCCTTCACTGGAAACATCCTCGATGTCGTAGAGCTTGTGAAGAAATCCACGGCTAACGACATGAGCTCCATCAGTCATGACATCGTTGATCGTTTGTTACCCTATTACTCTGCATGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTGTGTTTGACGGAGATGGAGTTGGTGAAGGAAGTATTGGGGAAGGGCAGCAATGTGTGTGGGAGGTCATGGATGCAAAGACAAGGGACCAAACACTTCATAGGGAAGGGATTGTTGATGGCAAATGGAGAAGCTTGGCATCATCAACGTCACCTGATTTCACCTGCGTTTAGAGGGGAAAGGCTCAAGGTTCATATTCAAACCTGA MAYDTLSFYWLTPRRIRKRMAEQGVYGPDPRPFTGNILDVVELVKKSTANDMSSISHDIVDRLLPYYSAWTKQYGKRFIYWNGMEPRLCLTEMELVKEVLGKGSNVCGRSWMQRQGTKHFIGKGLLMANGEAWHHQRHLISPAFRGERLKVHIQT Homology
BLAST of Csor.00g194700.m01 vs. ExPASy Swiss-Prot
Match: Q9FF18 (Cytokinin hydroxylase OS=Arabidopsis thaliana OX=3702 GN=CYP735A1 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.1e-59 Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy Swiss-Prot
Match: Q9ZW95 (Cytokinin hydroxylase OS=Arabidopsis thaliana OX=3702 GN=CYP735A2 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.3e-55 Identity = 94/148 (63.51%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy Swiss-Prot
Match: Q9ASR3 (Cytochrome P450 709B1 OS=Arabidopsis thaliana OX=3702 GN=CYP709B1 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.8e-24 Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy Swiss-Prot
Match: Q8LIF2 (Cytochrome P450 734A5 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP734A5 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.6e-21 Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy Swiss-Prot
Match: F4IK45 (Cytochrome P450 709B2 OS=Arabidopsis thaliana OX=3702 GN=CYP709B2 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.0e-21 Identity = 49/145 (33.79%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. NCBI nr
Match: KAG6607036.1 (Cytokinin hydroxylase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 331 bits (848), Expect = 1.18e-114 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. NCBI nr
Match: XP_023524594.1 (cytokinin hydroxylase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309 bits (791), Expect = 2.52e-104 Identity = 144/150 (96.00%), Postives = 147/150 (98.00%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. NCBI nr
Match: XP_022948950.1 (cytokinin hydroxylase-like [Cucurbita moschata]) HSP 1 Score: 315 bits (806), Expect = 3.72e-103 Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. NCBI nr
Match: XP_023523398.1 (cytokinin hydroxylase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309 bits (791), Expect = 8.29e-101 Identity = 144/150 (96.00%), Postives = 147/150 (98.00%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. NCBI nr
Match: XP_022997665.1 (cytokinin hydroxylase-like [Cucurbita maxima]) HSP 1 Score: 306 bits (785), Expect = 5.46e-100 Identity = 141/150 (94.00%), Postives = 146/150 (97.33%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy TrEMBL
Match: A0A6J1GBC3 (cytokinin hydroxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111452447 PE=3 SV=1) HSP 1 Score: 315 bits (806), Expect = 1.80e-103 Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy TrEMBL
Match: A0A6J1KAH1 (cytokinin hydroxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111492562 PE=3 SV=1) HSP 1 Score: 306 bits (785), Expect = 2.64e-100 Identity = 141/150 (94.00%), Postives = 146/150 (97.33%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy TrEMBL
Match: A0A1S3CGC0 (cytokinin hydroxylase-like OS=Cucumis melo OX=3656 GN=LOC103500156 PE=3 SV=1) HSP 1 Score: 258 bits (660), Expect = 1.95e-81 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy TrEMBL
Match: A0A0A0L6Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271920 PE=3 SV=1) HSP 1 Score: 258 bits (659), Expect = 2.75e-81 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. ExPASy TrEMBL
Match: A0A6J1J2Y1 (cytokinin hydroxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111482203 PE=3 SV=1) HSP 1 Score: 254 bits (648), Expect = 1.05e-79 Identity = 116/150 (77.33%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. TAIR 10
Match: AT5G38450.1 (cytochrome P450, family 735, subfamily A, polypeptide 1 ) HSP 1 Score: 230.7 bits (587), Expect = 7.9e-61 Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. TAIR 10
Match: AT1G67110.1 (cytochrome P450, family 735, subfamily A, polypeptide 2 ) HSP 1 Score: 214.9 bits (546), Expect = 4.5e-56 Identity = 94/148 (63.51%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. TAIR 10
Match: AT2G46960.2 (cytochrome P450, family 709, subfamily B, polypeptide 1 ) HSP 1 Score: 112.1 bits (279), Expect = 4.1e-25 Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. TAIR 10
Match: AT2G46950.1 (cytochrome P450, family 709, subfamily B, polypeptide 2 ) HSP 1 Score: 102.1 bits (253), Expect = 4.2e-22 Identity = 49/145 (33.79%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Csor.00g194700.m01 vs. TAIR 10
Match: AT2G26710.1 (Cytochrome P450 superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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