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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACACCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCATCAGTTGGCAAGAAAAAGTGA mRNA sequence TGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACACCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCATCAGTTGGCAAGAAAAAGTGA Coding sequence (CDS) TGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACACCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCATCAGTTGGCAAGAAAAAGTGA Protein sequence WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPSVGKKK*
Homology
BLAST of CsaV3_7G021720.1 vs. NCBI nr
Match: KAE8646045.1 (hypothetical protein Csa_016067, partial [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 7.4e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 60
WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH
Sbjct: 1 WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 60
Query: 61 HEELPLEEGAVESDDEKVLPSVGKKK 87
HEELPLEEGAVESDDEKVLPSVGKKK
Sbjct: 61 HEELPLEEGAVESDDEKVLPSVGKKK 86
BLAST of CsaV3_7G021720.1 vs. ExPASy TrEMBL
Match: A0A0A0K393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 3.6e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 60
WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH
Sbjct: 34 WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 93
Query: 61 HEELPLEEGAVESDDEKVLPSVGKKK 87
HEELPLEEGAVESDDEKVLPSVGKKK
Sbjct: 94 HEELPLEEGAVESDDEKVLPSVGKKK 119
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646045.1 | 7.4e-42 | 100.00 | hypothetical protein Csa_016067, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K393 | 3.6e-42 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 62..86 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G021720.1.exon1 | CsaV3_7G021720.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G021720.1.cds1 | CsaV3_7G021720.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G021720.1 | CsaV3_7G021720.1-protein | polypeptide |
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