CsaV3_7G002990.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G002990.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Calcium-binding EF-hand family protein
Location	chr7: 2269929 .. 2273752 (+)
Sequence length	789
RNA-Seq Expression	CsaV3_7G002990.1
Synteny	CsaV3_7G002990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTAGAGATCTTGAACAGTGCAACCATTATGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATAAGAGAGCGTTTTAGCCATCTTGACATTGATAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTGTTGGAGACTCATTTTGGGATTGATACGAAACCCGACCCCAACGAGCTTTCGTCCGTCTACGGCTCCTTGTTTTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTTATGGAAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGAGAATCCACCAAACTCGCTGCGGCTTAATTGCAATATATATATAAGTTCTTTCCGAGAAGGTGTATACCAATTATTACGACATGCAGAGCTAAGATTAATTGAGTTGAATTTTGATTTTCTTTGGAAGGATGCTCATTTCATCCTAACAAAATGTTAGAGCAAAACTGAAATCATTCATCTTTTTTCTTTCGATTGATGAACTTTTACATTTTTGTGTATGATAATGGTAGAAATCAAATCTGCCTTTTTTCCATTTTTGACAAGGATGTAATATAATCTAGCTTTGAGACAGTAATTTATTTATCTTATAGCTGCGAATTTAATTAGGTGAATTTCACATGTTACACGAACCATATATGATACACAATTGTTAAAATTAGCTAGAAGACAATAAGCATAAGGTGGAATTCATATCCAATCATATAAACTATATATTTATATAAAGTTTTAACTTTTGAAATTATTGAAACTAATTAATTTGAATTTTCTTCAAAACTATAGATAGAAGTGTTTGTCATCTCAATTGGAATATACAAAAAAACTTGAACAATCAACTTTTAAGGAGAGGAAGGAAAGATGTCAAATAATTGGGTCATTGTAGAGAAATTTTTGTACAACACATGTTATATATATTTCTAATAAGAATAAATATGCTATAGGATTTGTATTGAAGGAATACTTTGTTCTATTTTTAAAATTCTAAGAATGTGGTAATTAAATTAAATACGTTTTTGAATTGATGCCAACAAATTTGGGGAATCACATCCATTGAAGATGCTTCCCTCTTTTTCTTGGGTACTTTCGAGTGAAAATTGAAGATTTCGAACCACAAATTTCTTAATCACACACATACGTTACATATGGTATATTAGTTGAGTTAAATTAGCGTGGAGAAATATGCTTCACTTTTAAAACAGCTTTTAGTCTTGTGAATAGTAAAATGAAAAAAATTCTTGGATAATCTTTTATTTCTTTATTATTCGTTTCCGTATATAAATTATAATGGCTAAATTAATTCAAGAATTTGACTTCCGACCTCTTGAACTATAATACATGTTTAAATTAGAAATATATATATATTTTTTTTTTTTTGAACTTTTACGTACAATACAATCTATTGATTGAACTTATAATAATAATATAATAATTCATTCAAAATATAGTAAAACAAAGTGATAAACCATGTTACAAATATTGATTTGTTTCTATTCGACTATAAGAGTCGATAGCCATAAAAGTAGATTGTACTATATTTGTAACATTTTAAATAGTTATTATACACTAAATTATTGTCCCTAAAATTCTCGTTCATTTTAATCATCCACAAAAAATTCTTAAAACATTAATAAGCAGAGGCCGAAAATTAGTATTGGAAATAAGAAAACTAAAGCATGAAAAGAAGAAGAGAGCAAAAACATAAGATTCTCCCTAATAAAACGTCTCTATACCAATAGAATGGGCCAAAACAACACATTATTTGAGCATTTGTTTGCTTTATTGTTTTCTTTTTCTTTAAATAAAAAATAATAGACATAGTTGTAAATTTAGCAATTACATTTAAAATAATTAACTTTATAGCAACATTTTAAAAAAATTGTCAAATTCTATTCATACATACAAGTCTATCAAGAATTGTTTTGCTATATTTGCAATTGTTTAAAAATGTTGTTATATTCTTATTTATTATTTTTAAAATTATCATAATTACAATTACTTAATAAAAAATAATAATTTTTTGTTTGGTAAAATATTTTTTTTAAAATAAACTTTTAGAGAGGTAAAGGGAAATATTAAACGATGTAAAGATATAATTTTATATATATATATATATATATATATATATATATATATATATATATATAATTTAAAGAAAAAGTTTATGTAAAATAGACAAAGAAATAAAAAAAGGTTTTAGAGAAAGAACGGTGTAGAAAGAGAATGAAATGTTAGAGAGAATATTATAGTAAGAAATTAAAGAGCAATAGATGCTGTTTAAAAAAAAAGATGGAGTGGATCAATAAATTAAACATAGGTTAAAAGCAAAAGACATAAATTCAAGATATACATCAGATAAAGAGAATATTAGTAATGGAAAGAGAGAAGAAATTTGAAAGTGAAGTAAGAGGATAATTATTTAATAGTATGTTTTAATCTCTATATAACATTTTCAAATATAGCTATACCAAAATTATTAAATTCTTTATAGTTTATTTGAAATTTTTTTGCTATATTTTGTAAAGCTTTGCTTTTTTTTTTTCTTCATCAAAACAAAACGTGTCGAAGGGTTTCATTTCAAAGTAAAATTTTATTCTTTAAACTATTTTTTTACTTATTCATGCAGAATTTTCTCTCAAATCTTAGTCGTAATATTCCTTAACCTTAAAGATTATTGTCAATAGAGTTTGACAGCATATCTTCTCAGTATACAGTAGCTAGTAAGGAATAAATTTGTAACTTACTTTAGAGGTTAACTTTCTAAACTTTTTTAAAAAAAGAGAAAAAATCTCTTTTTTAAAAAAACTAATTATAATAAGCAATAGACTTAGGTGTTGTTAAAAGCAGGTTTAAAATAAGTGCATGTTTAAAAGTAAATTGTAATCACTTTTTGATATCAAATTTTTAATATTACTAATATGTGATAAAAGTGATGTTAAGCATTTTAAAATCATTCTCAAACATGCAATAAAACTGCCATGATTTTGTAAACCGACCAATTGGATTCTTAACGCTCTACTCACCGACCTCTCCTTGTGTTGACTTTGGTTCATTATTAAAATGTGTTGTATAAAATTCCATTTGAACATCCTTTTTCACATCCATTAAATCAAATCAAGGATTGGCCCCCAAGAACCTTCAACAGTGGCATAAACAAATGGCTAAAAGAGAAATAAACCCTCCTGAGACCTATTTATATGAAGAAACCTGACCCAACCTTCTGCTCATAAAAAACCCAACTCAAAATCTTTTCCAATACCTTCCAATTTCCTCTTTAATTCACCTAAATATCAGAACTAGGAAAAATGAGTGTGGAAATATTGGACGGTACCACAATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAATGCCTATATAAGAGCCCAATTCGCTCACCTCGACACTGACCATGATGGTCTCCTTTCCTATAATGAGATGCTGGAGGAGTTACAGAGCCTCAGGGTGTTCGATGCCGATTTCGGAAATGATGAGAAGCTTGGTCCAGATGAGCTTTCGTCTGTCTATAGTTCTCTGTTTTTGCAATTTGATCGTGACTCGGATGGAATGGTTGATCTGGATGCGTATAAGACTGAGATCAAAAGAATGATGCTAGCTATGGCTAATGGGATTGGCTTCTTACCTGTTCAGATGGTGCTTGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGCGTGAAACTGCCATAATGGCTGCTTGA

mRNA sequence

ATGAGCGTAGAGATCTTGAACAGTGCAACCATTATGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATAAGAGAGCGTTTTAGCCATCTTGACATTGATAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTGTTGGAGACTCATTTTGGGATTGATACGAAACCCGACCCCAACGAGCTTTCGTCCGTCTACGGCTCCTTGTTTTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTTATGGAAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAAACTAGGAAAAATGAGTGTGGAAATATTGGACGGTACCACAATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAATGCCTATATAAGAGCCCAATTCGCTCACCTCGACACTGACCATGATGGTCTCCTTTCCTATAATGAGATGCTGGAGGAGTTACAGAGCCTCAGGGTGTTCGATGCCGATTTCGGAAATGATGAGAAGCTTGGTCCAGATGAGCTTTCGTCTGTCTATAGTTCTCTGTTTTTGCAATTTGATCGTGACTCGGATGGAATGGTTGATCTGGATGCGTATAAGACTGAGATCAAAAGAATGATGCTAGCTATGGCTAATGGGATTGGCTTCTTACCTGTTCAGATGGTGCTTGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGCGTGAAACTGCCATAATGGCTGCTTGA

Coding sequence (CDS)

ATGAGCGTAGAGATCTTGAACAGTGCAACCATTATGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATAAGAGAGCGTTTTAGCCATCTTGACATTGATAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTGTTGGAGACTCATTTTGGGATTGATACGAAACCCGACCCCAACGAGCTTTCGTCCGTCTACGGCTCCTTGTTTTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTTATGGAAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAAACTAGGAAAAATGAGTGTGGAAATATTGGACGGTACCACAATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAATGCCTATATAAGAGCCCAATTCGCTCACCTCGACACTGACCATGATGGTCTCCTTTCCTATAATGAGATGCTGGAGGAGTTACAGAGCCTCAGGGTGTTCGATGCCGATTTCGGAAATGATGAGAAGCTTGGTCCAGATGAGCTTTCGTCTGTCTATAGTTCTCTGTTTTTGCAATTTGATCGTGACTCGGATGGAATGGTTGATCTGGATGCGTATAAGACTGAGATCAAAAGAATGATGCTAGCTATGGCTAATGGGATTGGCTTCTTACCTGTTCAGATGGTGCTTGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGCGTGAAACTGCCATAATGGCTGCTTGA

Protein sequence

MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEENKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA*

Homology

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BLAST of CsaV3_7G002990.1 vs. NCBI nr
Match: KAE8645727.1 (hypothetical protein Csa_020381 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 9.1e-144
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVF 180
           NKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVF
Sbjct: 121 NKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVF 180

Query: 181 DADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQ 240
           DADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQ
Sbjct: 181 DADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQ 240

Query: 241 MVLEEGSFLMKAVERETAIMAA 263
           MVLEEGSFLMKAVERETAIMAA
Sbjct: 241 MVLEEGSFLMKAVERETAIMAA 262

[Close]

BLAST of CsaV3_7G002990.1 vs. NCBI nr
Match: KAF9688252.1 (hypothetical protein SADUNF_Sadunf02G0178000 [Salix dunnii])

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-91
Identity = 180/269 (66.91%), Postives = 207/269 (76.95%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI+NF+EDEEAF+  IR+RF+HLD D DG L YGEMLKELQ LRVLETHFG
Sbjct: 1   MSVEILDGATIVNFMEDEEAFNVQIRDRFAHLDSDHDGRLSYGEMLKELQCLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           +D + DP+EL  VY SLF+QFD D NG VDL EF  ETK+MMLAMANG+G  PVQM+LEE
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEE 120

Query: 121 NKL-----------GKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNE 180
           +              KMSVEILDG TIVNF+EDE AFN  IR +FAHLDTDHDG LSY E
Sbjct: 121 DSFLKKAAEWESAKLKMSVEILDGATIVNFMEDEEAFNVQIRDRFAHLDTDHDGRLSYGE 180

Query: 181 MLEELQSLRVFDADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLA 240
           ML+ELQ LRV +  FG D +  PDEL  VY SLF+QFD D +G VDL+ +K+E K+MMLA
Sbjct: 181 MLKELQCLRVLETHFGVDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLA 240

Query: 241 MANGIGFLPVQMVLEEGSFLMKAVERETA 259
           MANG+GFLPVQMVLEE SFL KA E E+A
Sbjct: 241 MANGMGFLPVQMVLEEDSFLKKAAEWESA 269

[Close]

BLAST of CsaV3_7G002990.1 vs. NCBI nr
Match: KAF9688250.1 (hypothetical protein SADUNF_Sadunf02G0177700 [Salix dunnii])

HSP 1 Score: 342.8 bits (878), Expect = 2.6e-90
Identity = 179/269 (66.54%), Postives = 206/269 (76.58%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI+NF+EDEEAF+  I +RF+HLD D DG L YGEMLKELQ LRVLETHFG
Sbjct: 1   MSVEILDGATIVNFMEDEEAFNVQICDRFAHLDSDHDGRLSYGEMLKELQCLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           +D + DP+EL  VY SLF+QFD D NG VDL EF  ETK+MMLAMANG+G  PVQM+LEE
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEE 120

Query: 121 NKL-----------GKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNE 180
           +              KMSVEILDG TIVNF+EDE AFN  IR +FAHLDTDHDG LSY E
Sbjct: 121 DSFLKKAAEWESAKLKMSVEILDGATIVNFMEDEEAFNVQIRDRFAHLDTDHDGRLSYGE 180

Query: 181 MLEELQSLRVFDADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLA 240
           ML+ELQ LRV +  FG D +  PDEL  VY SLF+QFD D +G VDL+ +K+E K+MMLA
Sbjct: 181 MLKELQCLRVLETHFGVDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLA 240

Query: 241 MANGIGFLPVQMVLEEGSFLMKAVERETA 259
           MANG+GFLPVQMVLEE SFL KA E E+A
Sbjct: 241 MANGMGFLPVQMVLEEDSFLKKAAEWESA 269

[Close]

BLAST of CsaV3_7G002990.1 vs. NCBI nr
Match: KAG5614046.1 (hypothetical protein H5410_013870 [Solanum commersonii])

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-89
Identity = 166/256 (64.84%), Postives = 209/256 (81.64%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVE+L+ ATI++FVEDEEAFS +I ERF++LD + DG+L Y EMLKELQ LRV +THFG
Sbjct: 1   MSVEVLDGATILSFVEDEEAFSEFIAERFNNLDKNHDGILSYSEMLKELQGLRVFDTHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           ID K DPNE+S VY S+F+QFDRD NG VDL EF +E K+MM+AMANG+G  P+QM+LEE
Sbjct: 61  IDVKTDPNEVSRVYSSIFVQFDRDSNGTVDLEEFKQEMKEMMVAMANGLGFLPIQMVLEE 120

Query: 121 NKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVF 180
           NK       +LDG TI++FVEDE AF+ +I  +F +LD +HDG+LSY+EML+ELQ LRVF
Sbjct: 121 NK-------VLDGATILSFVEDEQAFSEFITERFNNLDKNHDGILSYSEMLKELQGLRVF 180

Query: 181 DADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQ 240
           D  FG D K+ P+E+S VYSS+F+QFDRDS+G VDL+ +K E+K MM+AMANG+GFLP+Q
Sbjct: 181 DTHFGIDVKIDPNEVSRVYSSIFVQFDRDSNGTVDLEEFKQEMKEMMVAMANGLGFLPIQ 240

Query: 241 MVLEEGSFLMKAVERE 257
           MVLEE SFL KAV+RE
Sbjct: 241 MVLEENSFLKKAVDRE 249

[Close]

BLAST of CsaV3_7G002990.1 vs. NCBI nr
Match: KAF9669587.1 (hypothetical protein SADUNF_Sadunf14G0123000 [Salix dunnii])

HSP 1 Score: 336.3 bits (861), Expect = 2.4e-88
Identity = 173/275 (62.91%), Postives = 208/275 (75.64%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI+NF+EDEEAF+  +R+RF+HLD + DG L YGEMLKELQ LRV+ETHFG
Sbjct: 1   MSVEILDGATIVNFLEDEEAFNVSVRDRFAHLDSNHDGQLSYGEMLKELQGLRVMETHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           +D + DP+EL  VY SLF+QFD D NG VDL EF  ET++MMLAMANG+G  PVQM+LEE
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKAETRQMMLAMANGMGFLPVQMVLEE 120

Query: 121 NK-------------LGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSY 180
           +              L   SVEILDG TIVNF+EDE AFN  +R +FAHLD++HDG LSY
Sbjct: 121 DSFLKKAVEWESAKLLASYSVEILDGATIVNFLEDEEAFNVSVRDRFAHLDSNHDGQLSY 180

Query: 181 NEMLEELQSLRVFDADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMM 240
            EML+ELQ LRV +  FG D +  PDEL  VY SLF+QFD D +G VDL+ +K E ++MM
Sbjct: 181 GEMLKELQGLRVMETHFGVDVETDPDELFRVYDSLFVQFDHDLNGTVDLEEFKAETRQMM 240

Query: 241 LAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA 263
           LAMANG+GFLPVQMVLEE SFL KAVE E+A + A
Sbjct: 241 LAMANGMGFLPVQMVLEEDSFLKKAVEWESAKLLA 275

[Close]

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL
Match: A5B6N0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_027019 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 4.1e-81
Identity = 170/305 (55.74%), Postives = 201/305 (65.90%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEILN ATI  FVEDEEAF+ W+ + F+ LD D+DGVL Y EMLKELQ LRV ET FG
Sbjct: 1   MSVEILNGATIDGFVEDEEAFNSWVHDXFAALDEDQDGVLSYEEMLKELQCLRVFETXFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           ID K D +E++ VY  LF QFDRD NG +D  EF   TK+MMLA+A+G+GL P+QM+LEE
Sbjct: 61  IDVKTDADEVAGVYCFLFSQFDRDSNGVLDFEEFKTATKRMMLAVADGLGLLPLQMILEE 120

Query: 121 NKLGK-------------------------------------------MSVEILDGTTIV 180
               K                                           MSVE+LDG TIV
Sbjct: 121 GSFLKKAVEWESTKLFHRHSDDGIYESLPISLSFSWILASLSAGAEERMSVEVLDGATIV 180

Query: 181 NFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFGNDEKLGPDELSS 240
           +FVEDE AFN  I  +F++LDT+HDG LS  EML+E QSLRVF+  FG D K  PDEL+ 
Sbjct: 181 SFVEDEEAFNGLIHDRFSNLDTNHDGFLSXAEMLKEFQSLRVFETHFGIDVKRDPDELAH 240

Query: 241 VYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEEGSFLMKAVERET 263
           VY SLF++FD D++G VDL+ +K E KRMMLAMANG+GFLPVQMVLEE SFL KAVERE 
Sbjct: 241 VYBSLFVKFDHDANGAVDLEEFKKETKRMMLAMANGLGFLPVQMVLEEDSFLKKAVEREA 300

[Close]

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL
Match: A5BTB3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036814 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80
Identity = 169/305 (55.41%), Postives = 200/305 (65.57%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVEILN ATI  FVEDEEAF+ W+ + F+ LD D+DGVL Y EMLKELQ LRV ET FG
Sbjct: 1   MSVEILNGATIXGFVEDEEAFNSWVHDXFAALDEDQDGVLSYEEMLKELQCLRVFETXFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           ID K D +E++ VY  LF QFD D NG +D  EF   TK+MMLA+A+G+GL P+QM+LEE
Sbjct: 61  IDVKTDXDEVAGVYCFLFSQFDXDSNGVLDFEEFKTATKRMMLAVADGLGLLPLQMILEE 120

Query: 121 NKLGK-------------------------------------------MSVEILDGTTIV 180
               K                                           MSVE+LDG TIV
Sbjct: 121 GSFLKKAVEWESTKLFHRHSDDGIYESLPISLSFSWILASLSAGAEERMSVEVLDGXTIV 180

Query: 181 NFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFGNDEKLGPDELSS 240
           +FVEDE AFN  I  +F++LDT+HDG LS  EML+E QSLRVF+  FG D K  PDEL+ 
Sbjct: 181 SFVEDEEAFNGLIHDRFSNLDTNHDGFLSXAEMLKEFQSLRVFETHFGIDVKRDPDELAH 240

Query: 241 VYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEEGSFLMKAVERET 263
           VY SLF++FD D++G VDL+ +K E KRMMLAMANG+GFLPVQMVLEE SFL KAVERE 
Sbjct: 241 VYDSLFVKFDHDANGAVDLEEFKKETKRMMLAMANGLGFLPVQMVLEEDSFLKKAVEREA 300

[Close]

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL
Match: A0A2P5XYB2 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12312 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 2.2e-74
Identity = 156/257 (60.70%), Postives = 179/257 (69.65%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           MSVE+L+ ATI+NFVEDEEAF+  IRERF+HLD + DG+L Y E+ K+LQSLRVLETHFG
Sbjct: 1   MSVEVLDCATIVNFVEDEEAFNISIRERFAHLDTNHDGLLSYTELSKDLQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           ID K DP EL+ VY SLF QFD D NG VDL EF  ETK+MMLAMANG+           
Sbjct: 61  IDIKTDPKELAHVYESLFEQFDHDSNGTVDLDEFKLETKRMMLAMANGM----------- 120

Query: 121 NKLGKMSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVF 180
                                DE AFN  IR +FAHLDT+HDGLLSY E+ ++LQSLRV 
Sbjct: 121 ---------------------DEEAFNISIRERFAHLDTNHDGLLSYTELSKDLQSLRVL 180

Query: 181 DADFGNDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQ 240
           +  FG D K  P EL+ VY SLF QFD DS+G VDLD +K E KRMMLAMANG+GFLPVQ
Sbjct: 181 ETHFGIDIKTDPKELAHVYKSLFEQFDHDSNGTVDLDEFKLETKRMMLAMANGMGFLPVQ 225

Query: 241 MVLEEGSFLMKAVERET 258
           MVLEEGS L  AVE E+
Sbjct: 241 MVLEEGSLLKIAVEHES 225

[Close]

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL
Match: A0A0A0K3B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037625 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.3e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 126 MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG 185
           MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG
Sbjct: 1   MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG 60

Query: 186 NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 245
           NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE
Sbjct: 61  NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 246 GSFLMKAVERETAIMAA 263
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL
Match: A0A5A7UT84 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00150 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 126 MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG 185
           MSVEILD TTIVNFVEDEAAFNAYIR +F HLDT+HDGLLSYNEMLEELQSLRVF+ADFG
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFTHLDTNHDGLLSYNEMLEELQSLRVFEADFG 60

Query: 186 NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 245
           ND+KL PDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE
Sbjct: 61  NDKKLDPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 246 GSFLMKAVERETAIMAA 263
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]

BLAST of CsaV3_7G002990.1 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-27
Identity = 53/121 (43.80%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60
           M V +++ +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+R+LE+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120
           +D     +EL+++Y S+F +FD D +G VDL EF  E KK++LA+A+G+G  P+ M+L++
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 N 122
           +
Sbjct: 121 D 121

[Close]

BLAST of CsaV3_7G002990.1 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-08
Identity = 33/119 (27.73%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 5   ILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFGIDTK 64
           ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++  +E+       
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVA---- 64

Query: 65  PDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEENKL 124
              +E  +VY ++F +F  D   K     F +   +++ AMA GIG SPV M++  + L
Sbjct: 65  -PGDETDNVYNAIFERFGEDLVPK----NFRDLIAEILTAMARGIGNSPVIMVVHNDGL 114

[Close]

BLAST of CsaV3_7G002990.1 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 34/125 (27.20%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 129 EILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFGNDE 188
           ++LDG+ IV  VE+E  F+ ++  +F  LD D DG LS  E+   +  +    A  G   
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADI---GAALGLPA 72

Query: 189 KLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEEGSF 248
           +    +   +YS +  +F   S   V    +K  +  ++L MA G+   P+ ++  +G  
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 249 LMKAV 254
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:

BLAST of CsaV3_7G002990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645727.1	9.1e-144	100.00	hypothetical protein Csa_020381 [Cucumis sativus]	[more]
KAF9688252.1	3.1e-91	66.91	hypothetical protein SADUNF_Sadunf02G0178000 [Salix dunnii]	[more]
KAF9688250.1	2.6e-90	66.54	hypothetical protein SADUNF_Sadunf02G0177700 [Salix dunnii]	[more]
KAG5614046.1	1.3e-89	64.84	hypothetical protein H5410_013870 [Solanum commersonii]	[more]
KAF9669587.1	2.4e-88	62.91	hypothetical protein SADUNF_Sadunf14G0123000 [Salix dunnii]	[more]

BLAST of CsaV3_7G002990.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G002990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5B6N0	4.1e-81	55.74	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_027019 PE=4 SV=1	[more]
A5BTB3	1.5e-80	55.41	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036814 PE=4 SV=1	[more]
A0A2P5XYB2	2.2e-74	60.70	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12312 PE=4 SV...	[more]
A0A0A0K3B2	2.3e-68	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037625 PE=4 SV=1	[more]
A0A5A7UT84	1.0e-63	94.16	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CsaV3_7G002990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	4.4e-27	43.80	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	2.7e-08	27.73	Calcium-binding EF hand family protein	[more]
AT4G38810.2	1.0e-07	27.20	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 198..226 e-value: 13.0 score: 8.7 coord: 149..177 e-value: 0.21 score: 20.6 coord: 24..52 e-value: 1.4 score: 16.6 coord: 73..101 e-value: 7.8 score: 10.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 150..219 e-value: 4.1E-7 score: 30.3 coord: 25..97 e-value: 1.2E-7 score: 32.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 145..180 score: 9.659605
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 8.878534
None	No IPR available	GENE3D	1.10.238.10		coord: 24..107 e-value: 1.0E-8 score: 37.3
None	No IPR available	GENE3D	1.10.238.10		coord: 144..230 e-value: 1.0E-9 score: 40.4
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 126..258
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 1..122
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 126..258
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..122
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 158..170
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 23..223

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_7G002990	CsaV3_7G002990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G002990.1.exon1	CsaV3_7G002990.1.exon1	exon
CsaV3_7G002990.1.exon2	CsaV3_7G002990.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G002990.1.cds1	CsaV3_7G002990.1.cds1	CDS
CsaV3_7G002990.1.cds2	CsaV3_7G002990.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G002990.1	CsaV3_7G002990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding