CsaV3_6G009110.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G009110.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger, FYVE/PHD-type
Location	chr6: 7330802 .. 7331895 (-)
Sequence length	393
RNA-Seq Expression	CsaV3_6G009110.1
Synteny	CsaV3_6G009110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCATGCCCGAGTAACCTGTGGTCTACCTTTCTCTCTCTCTCTCTTTCTTCACTATATATAATAAGATTAATTAATTAAAAAAAAAAGATATAAACACCGACTCCAAAAACTTTCAAAGCCCACCACTTTTAATTTTCTTTTTTCTTTATATTTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCTCCTTTTTCTCCTGTTTGGTAGTTCATCTTCATCATCTCATTAAGTTTCTTTTTTTCTTTTCATTTTTAGTTTGGTAAAATTACAATAACAATAATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCGTATATCTCTTCTGCTGCTCCTTTTCTTTTCTTTCTTTCTTTCTTTTTATCATCACATGCATGTTTTCCATCTTCAATTCAAATCCTTTTAGTTTAAATGGCGTGCCTTAAATTCTTGTTATCTCTTCTTTTTTTTTTTTTTAAATTGGAAATAGTAATTCTTAATAACTATCTTATATTGTCATCATTTTGTTGGATTTTGGGTTTCGTGCCAATTTTCCCACTCATAAAATAGCTAAATAACTAATTAAAATTAAATTGTTTCTGAAATAAAATTGTAAACATAGTACCGGAGCTAATTTGTTTTTTGTTTCTTGGAATCTAACAGCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGAAAAAAGGACGGTGTGAGCTAAAACGCAGCGTTTTGGGGTTCGTTTTATTTTCTCTCGATATATATAGTTCTCTTTTTCTTATTCTCA

mRNA sequence

ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA

Coding sequence (CDS)

ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA

Protein sequence

MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC*

Homology

[Close]

BLAST of CsaV3_6G009110.1 vs. NCBI nr
Match: XP_004140491.1 (uncharacterized protein LOC101205257 [Cucumis sativus] >KGN46561.1 hypothetical protein Csa_005625 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 2.1e-72
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120
           RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120

Query: 121 RYKLLKDVMC 131
           RYKLLKDVMC
Sbjct: 121 RYKLLKDVMC 130

[Close]

BLAST of CsaV3_6G009110.1 vs. NCBI nr
Match: XP_008467003.1 (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST- 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST 
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPT 120
           SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPT
Sbjct: 61  SRSHGSSSSRRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 132

[Close]

BLAST of CsaV3_6G009110.1 vs. NCBI nr
Match: XP_038875571.1 (uncharacterized protein LOC120067983 [Benincasa hispida])

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 118/132 (89.39%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLF CNKC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR++S
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFRCNKCHNRFQHSYCSNYYSESAEPIEVCDWCQCEGRTSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHGGAGSTSSPRPT 120
           RSHGSSSRRPPSTGTNA G+M+RSEYSG+K IKHHH DS T  EKGKHGGAGST SPRPT
Sbjct: 61  RSHGSSSRRPPSTGTNAAGLMSRSEYSGEK-IKHHHDDSATTIEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. NCBI nr
Match: KAG6575224.1 (hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013793.1 hypothetical protein SDJN02_23960 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 108/132 (81.82%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T A GI++RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPQTATEAAGILSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. NCBI nr
Match: XP_022959271.1 (uncharacterized protein LOC111460301 [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL
Match: A0A0A0KFQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108590 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120
           RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120

Query: 121 RYKLLKDVMC 131
           RYKLLKDVMC
Sbjct: 121 RYKLLKDVMC 130

[Close]

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL
Match: A0A1S3CSH8 (uncharacterized protein LOC103504413 OS=Cucumis melo OX=3656 GN=LOC103504413 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST- 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST 
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPT 120
           SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPT
Sbjct: 61  SRSHGSSSSRRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 132

[Close]

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL
Match: A0A6J1L0S8 (uncharacterized protein LOC111499326 OS=Cucurbita maxima OX=3661 GN=LOC111499326 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCVKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD--SPTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T A GIM+RS YSGDK IKHHH D  +  +KGK GGAGS  SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEAAGIMSRSVYSGDK-IKHHHEDAAAAVDKGKQGGAGSAPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL
Match: A0A6J1H4E1 (uncharacterized protein LOC111460301 OS=Cucurbita moschata OX=3662 GN=LOC111460301 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL
Match: A0A5D3BDU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27861G00010 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.0e-54
Identity = 109/123 (88.62%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 10  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSS 69
           MCGDIGFPDKLFHCNK        YCSNYYSESAEPIEVCDWCQCEGRST SRSHG SSS
Sbjct: 1   MCGDIGFPDKLFHCNK--------YCSNYYSESAEPIEVCDWCQCEGRSTSSRSHGSSSS 60

Query: 70  RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTRRYKLLKD 129
           RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPTTRRYKLLKD
Sbjct: 61  RRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPTTRRYKLLKD 115

Query: 130 VMC 131
           VMC
Sbjct: 121 VMC 115

[Close]

BLAST of CsaV3_6G009110.1 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-34
Identity = 72/132 (54.55%), Postives = 86/132 (65.15%), Query Frame = 0


Query: 4   LQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS--- 63
           ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S   
Sbjct: 1   MERVCCMCGDVGFSDKLFSCGHCRCRFQHSYCSNYYGQFAEPTEICDWCRSDDRKLSNVA 60

Query: 64  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HDSPTEKGKHGGAGSTSSPRPT 123
           R  GSSS++P S+         RSEYS    IKH++  HD    KG  G  G  +SP+  
Sbjct: 61  RHGGSSSKKPSSSVKYENDFSNRSEYSPGHRIKHNNNRHDQ-VAKGVAGDGGGVTSPKTA 120

Query: 124 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

[Close]

BLAST of CsaV3_6G009110.1 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 78/144 (54.17%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 1   MVDLQ-IVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS- 60
           MVDL+  VCCMCGD+GF DKLFHC+KC NRFQHSYCS+YY E A+PI++CDWCQCE +S 
Sbjct: 1   MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWCQCEAKSR 60

Query: 61  TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKHHHHDSPT--------EKGKH 120
           T   H   G SS+R             RSEYS     IK    +  T        +KGK 
Sbjct: 61  TGAKHGVNGGSSKR-----------SYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKT 120

Query: 121 GGAGSTSSPRPTTRRYKLLKDVMC 131
           G      SPRP TRRYKLLKDVMC
Sbjct: 121 G----VPSPRPATRRYKLLKDVMC 129

The following BLAST results are available for this feature:

BLAST of CsaV3_6G009110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140491.1	2.1e-72	100.00	uncharacterized protein LOC101205257 [Cucumis sativus] >KGN46561.1 hypothetical ...	[more]
XP_008467003.1	7.6e-67	95.45	PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]	[more]
XP_038875571.1	2.5e-62	89.39	uncharacterized protein LOC120067983 [Benincasa hispida]	[more]
KAG6575224.1	2.7e-56	81.82	hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022959271.1	6.1e-56	81.82	uncharacterized protein LOC111460301 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G009110.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G009110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ0	1.0e-72	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108590 PE=4 SV=1	[more]
A0A1S3CSH8	3.7e-67	95.45	uncharacterized protein LOC103504413 OS=Cucumis melo OX=3656 GN=LOC103504413 PE=...	[more]
A0A6J1L0S8	2.9e-56	81.82	uncharacterized protein LOC111499326 OS=Cucurbita maxima OX=3661 GN=LOC111499326...	[more]
A0A6J1H4E1	2.9e-56	81.82	uncharacterized protein LOC111460301 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A5D3BDU2	8.0e-54	88.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CsaV3_6G009110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02070.1	4.1e-34	54.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G60520.1	1.1e-31	54.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..83
None	No IPR available	PANTHER	PTHR33779	EXPRESSED PROTEIN	coord: 1..130
None	No IPR available	PANTHER	PTHR33779:SF16	SUBFAMILY NOT NAMED	coord: 1..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G009110	CsaV3_6G009110	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G009110.1.exon3	CsaV3_6G009110.1.exon3	exon
CsaV3_6G009110.1.exon2	CsaV3_6G009110.1.exon2	exon
CsaV3_6G009110.1.exon1	CsaV3_6G009110.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G009110.1.cds3	CsaV3_6G009110.1.cds3	CDS
CsaV3_6G009110.1.cds2	CsaV3_6G009110.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G009110.1	CsaV3_6G009110.1-protein	polypeptide