CsaV3_6G009110 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAACCATGCCCGAGTAACCTGTGGTCTACCTTTCTCTCTCTCTCTCTTTCTTCACTATATATAATAAGATTAATTAATTAAAAAAAAAAGATATAAACACCGACTCCAAAAACTTTCAAAGCCCACCACTTTTAATTTTCTTTTTTCTTTATATTTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCTCCTTTTTCTCCTGTTTGGTAGTTCATCTTCATCATCTCATTAAGTTTCTTTTTTTCTTTTCATTTTTAGTTTGGTAAAATTACAATAACAATAATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCGTATATCTCTTCTGCTGCTCCTTTTCTTTTCTTTCTTTCTTTCTTTTTATCATCACATGCATGTTTTCCATCTTCAATTCAAATCCTTTTAGTTTAAATGGCGTGCCTTAAATTCTTGTTATCTCTTCTTTTTTTTTTTTTTAAATTGGAAATAGTAATTCTTAATAACTATCTTATATTGTCATCATTTTGTTGGATTTTGGGTTTCGTGCCAATTTTCCCACTCATAAAATAGCTAAATAACTAATTAAAATTAAATTGTTTCTGAAATAAAATTGTAAACATAGTACCGGAGCTAATTTGTTTTTTGTTTCTTGGAATCTAACAGCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGAAAAAAGGACGGTGTGAGCTAAAACGCAGCGTTTTGGGGTTCGTTTTATTTTCTCTCGATATATATAGTTCTCTTTTTCTTATTCTCA ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC* Homology
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_004140491.1 (uncharacterized protein LOC101205257 [Cucumis sativus] >KGN46561.1 hypothetical protein Csa_005625 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 2.1e-72 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_008467003.1 (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67 Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_038875571.1 (uncharacterized protein LOC120067983 [Benincasa hispida]) HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62 Identity = 118/132 (89.39%), Postives = 123/132 (93.18%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: KAG6575224.1 (hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013793.1 hypothetical protein SDJN02_23960 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56 Identity = 108/132 (81.82%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_022959271.1 (uncharacterized protein LOC111460301 [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56 Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A0A0KFQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108590 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A1S3CSH8 (uncharacterized protein LOC103504413 OS=Cucumis melo OX=3656 GN=LOC103504413 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67 Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A6J1L0S8 (uncharacterized protein LOC111499326 OS=Cucurbita maxima OX=3661 GN=LOC111499326 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56 Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A6J1H4E1 (uncharacterized protein LOC111460301 OS=Cucurbita moschata OX=3662 GN=LOC111460301 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56 Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A5D3BDU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27861G00010 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.0e-54 Identity = 109/123 (88.62%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 141.7 bits (356), Expect = 4.1e-34 Identity = 72/132 (54.55%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of CsaV3_6G009110 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31 Identity = 78/144 (54.17%), Postives = 89/144 (61.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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