CsaV3_6G009110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G009110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionZinc finger, FYVE/PHD-type
Locationchr6: 7330771 .. 7331895 (-)
RNA-Seq ExpressionCsaV3_6G009110
SyntenyCsaV3_6G009110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCATGCCCGAGTAACCTGTGGTCTACCTTTCTCTCTCTCTCTCTTTCTTCACTATATATAATAAGATTAATTAATTAAAAAAAAAAGATATAAACACCGACTCCAAAAACTTTCAAAGCCCACCACTTTTAATTTTCTTTTTTCTTTATATTTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCTCCTTTTTCTCCTGTTTGGTAGTTCATCTTCATCATCTCATTAAGTTTCTTTTTTTCTTTTCATTTTTAGTTTGGTAAAATTACAATAACAATAATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCGTATATCTCTTCTGCTGCTCCTTTTCTTTTCTTTCTTTCTTTCTTTTTATCATCACATGCATGTTTTCCATCTTCAATTCAAATCCTTTTAGTTTAAATGGCGTGCCTTAAATTCTTGTTATCTCTTCTTTTTTTTTTTTTTAAATTGGAAATAGTAATTCTTAATAACTATCTTATATTGTCATCATTTTGTTGGATTTTGGGTTTCGTGCCAATTTTCCCACTCATAAAATAGCTAAATAACTAATTAAAATTAAATTGTTTCTGAAATAAAATTGTAAACATAGTACCGGAGCTAATTTGTTTTTTGTTTCTTGGAATCTAACAGCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGAAAAAAGGACGGTGTGAGCTAAAACGCAGCGTTTTGGGGTTCGTTTTATTTTCTCTCGATATATATAGTTCTCTTTTTCTTATTCTCA

mRNA sequence

ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA

Coding sequence (CDS)

ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA

Protein sequence

MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC*
Homology
BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_004140491.1 (uncharacterized protein LOC101205257 [Cucumis sativus] >KGN46561.1 hypothetical protein Csa_005625 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 2.1e-72
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120
           RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120

Query: 121 RYKLLKDVMC 131
           RYKLLKDVMC
Sbjct: 121 RYKLLKDVMC 130

BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_008467003.1 (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST- 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST 
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPT 120
           SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPT
Sbjct: 61  SRSHGSSSSRRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 132

BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_038875571.1 (uncharacterized protein LOC120067983 [Benincasa hispida])

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 118/132 (89.39%), Postives = 123/132 (93.18%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLF CNKC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR++S
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFRCNKCHNRFQHSYCSNYYSESAEPIEVCDWCQCEGRTSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHGGAGSTSSPRPT 120
           RSHGSSSRRPPSTGTNA G+M+RSEYSG+K IKHHH DS T  EKGKHGGAGST SPRPT
Sbjct: 61  RSHGSSSRRPPSTGTNAAGLMSRSEYSGEK-IKHHHDDSATTIEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. NCBI nr
Match: KAG6575224.1 (hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013793.1 hypothetical protein SDJN02_23960 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 108/132 (81.82%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T A GI++RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPQTATEAAGILSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. NCBI nr
Match: XP_022959271.1 (uncharacterized protein LOC111460301 [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A0A0KFQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108590 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120
           RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTR 120

Query: 121 RYKLLKDVMC 131
           RYKLLKDVMC
Sbjct: 121 RYKLLKDVMC 130

BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A1S3CSH8 (uncharacterized protein LOC103504413 OS=Cucumis melo OX=3656 GN=LOC103504413 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST- 60
           MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST 
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPT 120
           SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPT
Sbjct: 61  SRSHGSSSSRRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 132

BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A6J1L0S8 (uncharacterized protein LOC111499326 OS=Cucurbita maxima OX=3661 GN=LOC111499326 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCVKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD--SPTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T A GIM+RS YSGDK IKHHH D  +  +KGK GGAGS  SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEAAGIMSRSVYSGDK-IKHHHEDAAAAVDKGKQGGAGSAPSPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A6J1H4E1 (uncharacterized protein LOC111460301 OS=Cucurbita moschata OX=3662 GN=LOC111460301 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0

Query: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60

Query: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS--PTEKGKHGGAGSTSSPRPT 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS    +KGK GGAGS +SPRPT
Sbjct: 61  RSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSAATVDKGKQGGAGSVASPRPT 120

Query: 121 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. ExPASy TrEMBL
Match: A0A5D3BDU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27861G00010 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.0e-54
Identity = 109/123 (88.62%), Postives = 110/123 (89.43%), Query Frame = 0

Query: 10  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSS 69
           MCGDIGFPDKLFHCNK        YCSNYYSESAEPIEVCDWCQCEGRST SRSHG SSS
Sbjct: 1   MCGDIGFPDKLFHCNK--------YCSNYYSESAEPIEVCDWCQCEGRSTSSRSHGSSSS 60

Query: 70  RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTTRRYKLLKD 129
           RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHGGAGST SPRPTTRRYKLLKD
Sbjct: 61  RRPPSTGTNATGIMSRSEYSSDKLIKHHHDDSPTEKGKHGGAGSTPSPRPTTRRYKLLKD 115

Query: 130 VMC 131
           VMC
Sbjct: 121 VMC 115

BLAST of CsaV3_6G009110 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-34
Identity = 72/132 (54.55%), Postives = 86/132 (65.15%), Query Frame = 0

Query: 4   LQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS--- 63
           ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S   
Sbjct: 1   MERVCCMCGDVGFSDKLFSCGHCRCRFQHSYCSNYYGQFAEPTEICDWCRSDDRKLSNVA 60

Query: 64  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HDSPTEKGKHGGAGSTSSPRPT 123
           R  GSSS++P S+         RSEYS    IKH++  HD    KG  G  G  +SP+  
Sbjct: 61  RHGGSSSKKPSSSVKYENDFSNRSEYSPGHRIKHNNNRHDQ-VAKGVAGDGGGVTSPKTA 120

Query: 124 TRRYKLLKDVMC 131
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 131

BLAST of CsaV3_6G009110 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 78/144 (54.17%), Postives = 89/144 (61.81%), Query Frame = 0

Query: 1   MVDLQ-IVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS- 60
           MVDL+  VCCMCGD+GF DKLFHC+KC NRFQHSYCS+YY E A+PI++CDWCQCE +S 
Sbjct: 1   MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWCQCEAKSR 60

Query: 61  TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKHHHHDSPT--------EKGKH 120
           T   H   G SS+R             RSEYS     IK    +  T        +KGK 
Sbjct: 61  TGAKHGVNGGSSKR-----------SYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKT 120

Query: 121 GGAGSTSSPRPTTRRYKLLKDVMC 131
           G      SPRP TRRYKLLKDVMC
Sbjct: 121 G----VPSPRPATRRYKLLKDVMC 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004140491.12.1e-72100.00uncharacterized protein LOC101205257 [Cucumis sativus] >KGN46561.1 hypothetical ... [more]
XP_008467003.17.6e-6795.45PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo][more]
XP_038875571.12.5e-6289.39uncharacterized protein LOC120067983 [Benincasa hispida][more]
KAG6575224.12.7e-5681.82hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022959271.16.1e-5681.82uncharacterized protein LOC111460301 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KFQ01.0e-72100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108590 PE=4 SV=1[more]
A0A1S3CSH83.7e-6795.45uncharacterized protein LOC103504413 OS=Cucumis melo OX=3656 GN=LOC103504413 PE=... [more]
A0A6J1L0S82.9e-5681.82uncharacterized protein LOC111499326 OS=Cucurbita maxima OX=3661 GN=LOC111499326... [more]
A0A6J1H4E12.9e-5681.82uncharacterized protein LOC111460301 OS=Cucurbita moschata OX=3662 GN=LOC1114603... [more]
A0A5D3BDU28.0e-5488.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT1G02070.14.1e-3454.55unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G60520.11.1e-3154.17unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..83
NoneNo IPR availablePANTHERPTHR33779EXPRESSED PROTEINcoord: 1..130
NoneNo IPR availablePANTHERPTHR33779:SF16SUBFAMILY NOT NAMEDcoord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G009110.1CsaV3_6G009110.1mRNA