CsaV3_5G006840.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G006840.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein of unknown function (DUF674)
Location	chr5: 4576449 .. 4577875 (-)
Sequence length	750
RNA-Seq Expression	CsaV3_5G006840.1
Synteny	CsaV3_5G006840.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAACGGATGTGACATTGAAGCTTCTGATTGACAAGAAAACAGAAAGAGTTCTTTACGGTGAAGCAGACAAGAAGTTCATAGACTTTCTTGTCAATGTACTTTCCCTCCCACTTGGGGGTGTAATTAGGCTGTTGAAAAAGGATGGCATGGTGGGGTGTTTGGGAAATCTGTACGAAAGTGTAGAAACGTTGAACAATTCCTATTTGCAGCCAAATCAAAGCAGAGATATAGTCCTAAAACCAAAAATCGTATTCAATTCTTTCACCAAACTTATGCCTAATGTTGATGTCGTCCCTGCTGCAGCAACACCGCCTGCTATATTTTATTGCGTCACTGGATCATATTGCCGTGGTTATGTTTCTTATTCTTGTAGTGCATTTTGTCCGAGTTGTAGCAAAAACTTGAGTCAAGCTTGTCGATATGTGACGCCTCCAAAAGCAGGAAATCAGCCAGCTCCTGATCGGGGCTTTGTTAAGGATTTGGCCACTTACATAGTCACGGATGACCTCACTGTCAAGCACATTTCTGATTTCTCCATTACAACTCTTTTGAAGAAGTTCAATATCAAAGATGTGGATTCTTTGGAGGAGAAAGTCATCACTTTGGATGTTAATGAGGTAATTTATATATATCCACTCCTTTTCATTCGGTTGGTTATTTTAGGGTAAAATGTTGACGAATTTCATCTATGTGGTTTTGGGCAGAGGTTCTATATTTCGTTGCTATTTTTTTCCTCTGGAGTTCATATTCAAAAGTTTCAATTTTTGTCTCTTTCAGTTTAGTCAAACTTCCAAGTTCCAAAATCATCACTATCATTTATTAAATCCTAATGAATTTGTATTTATAGTTTGTGAGTTATTATAATTGTGTTCGAGGTGCATTTTAAGTCTGGATATGGTAATAAACATTATAACAAGAAAAAAAGAGAGTGCGGAAAGGAGATCATTAATATGTATGGATTTGAAAGAGTAAAGTAGTTAATTATAAGTTATAATAGTTGAGGTAACCGGAAAAAATTAAATGAATCAGGTTATGCAATGTCAATGTGCAGGAACAATTTAATAAAACTACAAAGACCAAATAAAAAACATTTAAGCCTACAAGGACCAGAGACTACTAAAGTTGAAGTCCAAATCATGGTGACTAATTACTTAAATCGAAAACTCTAAATTATAGAGATGAAATTGAAACTTTTTTCAAATGATGGACCAAATCTATAGTTCAACTGGGTTATTTTATGTCATTATGAGTCCATGTTGGAAATTTTGATGAACAAGGTTAGTTTTTGTTACAGGGTGTGGAATTGCTAGAGGCTTCTTTGCAGTCGAAGACAGTTCTAACAAATGCGTTTCTGAAAAGACGAAGATCACACATTGACAATGATGTTAAGCTTTCTGGATCTCTGAGCCCTTCTGTTTAA

mRNA sequence

ATGGAACAAACGGATGTGACATTGAAGCTTCTGATTGACAAGAAAACAGAAAGAGTTCTTTACGGTGAAGCAGACAAGAAGTTCATAGACTTTCTTGTCAATGTACTTTCCCTCCCACTTGGGGGTGTAATTAGGCTGTTGAAAAAGGATGGCATGGTGGGGTGTTTGGGAAATCTGTACGAAAGTGTAGAAACGTTGAACAATTCCTATTTGCAGCCAAATCAAAGCAGAGATATAGTCCTAAAACCAAAAATCGTATTCAATTCTTTCACCAAACTTATGCCTAATGTTGATGTCGTCCCTGCTGCAGCAACACCGCCTGCTATATTTTATTGCGTCACTGGATCATATTGCCGTGGTTATGTTTCTTATTCTTGTAGTGCATTTTGTCCGAGTTGTAGCAAAAACTTGAGTCAAGCTTGTCGATATGTGACGCCTCCAAAAGCAGGAAATCAGCCAGCTCCTGATCGGGGCTTTGTTAAGGATTTGGCCACTTACATAGTCACGGATGACCTCACTGTCAAGCACATTTCTGATTTCTCCATTACAACTCTTTTGAAGAAGTTCAATATCAAAGATGTGGATTCTTTGGAGGAGAAAGTCATCACTTTGGATGTTAATGAGGGTGTGGAATTGCTAGAGGCTTCTTTGCAGTCGAAGACAGTTCTAACAAATGCGTTTCTGAAAAGACGAAGATCACACATTGACAATGATGTTAAGCTTTCTGGATCTCTGAGCCCTTCTGTTTAA

Coding sequence (CDS)

ATGGAACAAACGGATGTGACATTGAAGCTTCTGATTGACAAGAAAACAGAAAGAGTTCTTTACGGTGAAGCAGACAAGAAGTTCATAGACTTTCTTGTCAATGTACTTTCCCTCCCACTTGGGGGTGTAATTAGGCTGTTGAAAAAGGATGGCATGGTGGGGTGTTTGGGAAATCTGTACGAAAGTGTAGAAACGTTGAACAATTCCTATTTGCAGCCAAATCAAAGCAGAGATATAGTCCTAAAACCAAAAATCGTATTCAATTCTTTCACCAAACTTATGCCTAATGTTGATGTCGTCCCTGCTGCAGCAACACCGCCTGCTATATTTTATTGCGTCACTGGATCATATTGCCGTGGTTATGTTTCTTATTCTTGTAGTGCATTTTGTCCGAGTTGTAGCAAAAACTTGAGTCAAGCTTGTCGATATGTGACGCCTCCAAAAGCAGGAAATCAGCCAGCTCCTGATCGGGGCTTTGTTAAGGATTTGGCCACTTACATAGTCACGGATGACCTCACTGTCAAGCACATTTCTGATTTCTCCATTACAACTCTTTTGAAGAAGTTCAATATCAAAGATGTGGATTCTTTGGAGGAGAAAGTCATCACTTTGGATGTTAATGAGGGTGTGGAATTGCTAGAGGCTTCTTTGCAGTCGAAGACAGTTCTAACAAATGCGTTTCTGAAAAGACGAAGATCACACATTGACAATGATGTTAAGCTTTCTGGATCTCTGAGCCCTTCTGTTTAA

Protein sequence

MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLYESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDNDVKLSGSLSPSV*

Homology

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BLAST of CsaV3_5G006840.1 vs. NCBI nr
Match: XP_031741245.1 (uncharacterized protein LOC105435653 [Cucumis sativus] >KAE8647978.1 hypothetical protein Csa_000490 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 2.1e-134
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY
Sbjct: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRG 120
           ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRG
Sbjct: 61  ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRG 120

Query: 121 YVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHISDF 180
           YVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHISDF
Sbjct: 121 YVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHISDF 180

Query: 181 SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDNDVK 240
           SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDNDVK
Sbjct: 181 SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDNDVK 240

Query: 241 LSGSLSPSV 250
           LSGSLSPSV
Sbjct: 241 LSGSLSPSV 249

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BLAST of CsaV3_5G006840.1 vs. NCBI nr
Match: XP_008465479.1 (PREDICTED: uncharacterized protein LOC103503094 [Cucumis melo] >KAA0062236.1 putative DNA polymerase zeta catalytic subunit [Cucumis melo var. makuwa])

HSP 1 Score: 411.4 bits (1056), Expect = 5.7e-111
Identity = 218/251 (86.85%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVI LLKK+GMVGCLGNLY
Sbjct: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIMLLKKNGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSY--C 120
           ESVETLN SYLQPNQSRD VLKPKI+FNSFTKL+PNV  VPAAATPPAIFYC   +Y  C
Sbjct: 61  ESVETLNKSYLQPNQSRDTVLKPKILFNSFTKLLPNVH-VPAAATPPAIFYCNGSTYSSC 120

Query: 121 RGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHIS 180
           R YVSYS SA CP C K LSQ+C YVTPPKA NQPA   G VKDLATYIV DDLTVKHIS
Sbjct: 121 RAYVSYSSSAVCPKCDKKLSQSCTYVTPPKAENQPASGGGSVKDLATYIVMDDLTVKHIS 180

Query: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDND 240
           DFSITTLLKKFNIKDVDSLEEKVITLDV+EGVELLEASLQSKTVLTNAFLKRRR HID+D
Sbjct: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVDEGVELLEASLQSKTVLTNAFLKRRRPHIDSD 240

Query: 241 VKLSGSLSPSV 250
           VKLS SL+PSV
Sbjct: 241 VKLSESLNPSV 250

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BLAST of CsaV3_5G006840.1 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-60
Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           M   +V LKLLID K +RVL+GEADK  IDFL N+LSLPLG VIRLLKK GMVGCLGNLY
Sbjct: 1   MASANVRLKLLIDSKEQRVLFGEADKNVIDFLFNLLSLPLGTVIRLLKKQGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVF--NSFTKLMPNVDVVPAAATPPAIFYCVTGSY- 120
           ESVETLN++YLQPNQS+DI+LKPK+ F  +S T L+PN+D+  AA T    + C + ++ 
Sbjct: 61  ESVETLNDTYLQPNQSKDILLKPKVSFCGSSSTMLLPNIDLSAAATT---FYLCNSTAHA 120

Query: 121 -CRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPA-----PDRGFVKDLATYIVTDD 180
            CR  VS   +A CP C+  ++Q   +V PP A           + GFVK + TY+V DD
Sbjct: 121 NCRRSVSDGPNAICPKCNVPMTQVGTFVKPPSASATTVAAAKEDEGGFVKGVVTYMVMDD 180

Query: 181 LTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRR 232
           L+VK +S  S   LL KFN+K+V +LEEKV+TLDVNEGV+LL+ASL SKTVLT+ F++R+
Sbjct: 181 LSVKPMSTISSIALLNKFNVKEVGALEEKVVTLDVNEGVKLLKASLHSKTVLTDVFIRRK 237

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BLAST of CsaV3_5G006840.1 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 133/231 (57.58%), Postives = 166/231 (71.86%), Query Frame = 0


Query: 5   DVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLYESVE 64
           +V LKLLID + +RVL+GEADK  IDFL N+LSLPLG VIRLLKK GMVG L NLYESVE
Sbjct: 7   EVRLKLLIDSEQKRVLFGEADKNLIDFLFNLLSLPLGTVIRLLKKQGMVGSLANLYESVE 66

Query: 65  TLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRGYVSY 124
            LN++YLQPNQS+D +LKPK+ F++ T L+PN++   + A     + C  G+ C   V+ 
Sbjct: 67  ALNDTYLQPNQSKDNLLKPKVSFSASTLLLPNIE---SYADKKKFYLC--GNRCGYNVAS 126

Query: 125 SCSAFCPSCSKNLSQACRYVTPPKAGNQPAPD----RGFVKDLATYIVTDDLTVKHISDF 184
           + +A CPSC   +S+ C  V PP A  Q   D     GFVK + TY+V DDL+VK +S  
Sbjct: 127 NPTAVCPSCRNAMSRECALVNPPNANTQATQDVGEFGGFVKGVVTYMVMDDLSVKPMSTI 186

Query: 185 SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRR 232
           S  TLL KFNIK+V +LEEKVITLDVN+GV+LL ASLQSKTVLT+ FL R+
Sbjct: 187 SSITLLNKFNIKEVGALEEKVITLDVNQGVKLLRASLQSKTVLTDVFLGRK 232

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BLAST of CsaV3_5G006840.1 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-55
Identity = 128/230 (55.65%), Postives = 166/230 (72.17%), Query Frame = 0


Query: 5   DVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLYESVE 64
           +V LKLLID K +RVL+GEADK  IDFL N+LSLPLG VIRLLKKD M G L NLY SVE
Sbjct: 7   EVKLKLLIDSKEKRVLFGEADKNMIDFLFNLLSLPLGTVIRLLKKD-MAGSLANLYGSVE 66

Query: 65  TLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRGYVSY 124
            LN++YLQPNQS+D +LKPK+ F++ T L+PN++   + A    ++ C  G+ C   V+ 
Sbjct: 67  ALNDTYLQPNQSKDSLLKPKVSFSASTLLLPNIE---SFADQKKLYLC--GNKCGYNVAS 126

Query: 125 SCSAFCPSCSKNLSQACRYVTPPKAGNQPAPD----RGFVKDLATYIVTDDLTVKHISDF 184
           + +A CP+C   +S+ C +V PP A  Q   D     GFVK + TY+V DDL+VK +S  
Sbjct: 127 NPTAVCPNCRSAMSRECGFVNPPSANAQATQDVGEFGGFVKGVVTYMVMDDLSVKPMSTI 186

Query: 185 SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKR 231
           S  TLL KFNIK+V +LEEKV+TLDV++G++LL+ASLQSKTVLT+ FL R
Sbjct: 187 SSITLLNKFNIKEVGALEEKVVTLDVSQGLKLLKASLQSKTVLTDVFLGR 230

[Close]

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL
Match: A0A5A7V731 (Putative DNA polymerase zeta catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00410 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.7e-111
Identity = 218/251 (86.85%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVI LLKK+GMVGCLGNLY
Sbjct: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIMLLKKNGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSY--C 120
           ESVETLN SYLQPNQSRD VLKPKI+FNSFTKL+PNV  VPAAATPPAIFYC   +Y  C
Sbjct: 61  ESVETLNKSYLQPNQSRDTVLKPKILFNSFTKLLPNVH-VPAAATPPAIFYCNGSTYSSC 120

Query: 121 RGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHIS 180
           R YVSYS SA CP C K LSQ+C YVTPPKA NQPA   G VKDLATYIV DDLTVKHIS
Sbjct: 121 RAYVSYSSSAVCPKCDKKLSQSCTYVTPPKAENQPASGGGSVKDLATYIVMDDLTVKHIS 180

Query: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDND 240
           DFSITTLLKKFNIKDVDSLEEKVITLDV+EGVELLEASLQSKTVLTNAFLKRRR HID+D
Sbjct: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVDEGVELLEASLQSKTVLTNAFLKRRRPHIDSD 240

Query: 241 VKLSGSLSPSV 250
           VKLS SL+PSV
Sbjct: 241 VKLSESLNPSV 250

[Close]

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL
Match: A0A1S3CPD6 (uncharacterized protein LOC103503094 OS=Cucumis melo OX=3656 GN=LOC103503094 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.7e-111
Identity = 218/251 (86.85%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVI LLKK+GMVGCLGNLY
Sbjct: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIMLLKKNGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSY--C 120
           ESVETLN SYLQPNQSRD VLKPKI+FNSFTKL+PNV  VPAAATPPAIFYC   +Y  C
Sbjct: 61  ESVETLNKSYLQPNQSRDTVLKPKILFNSFTKLLPNVH-VPAAATPPAIFYCNGSTYSSC 120

Query: 121 RGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTVKHIS 180
           R YVSYS SA CP C K LSQ+C YVTPPKA NQPA   G VKDLATYIV DDLTVKHIS
Sbjct: 121 RAYVSYSSSAVCPKCDKKLSQSCTYVTPPKAENQPASGGGSVKDLATYIVMDDLTVKHIS 180

Query: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSHIDND 240
           DFSITTLLKKFNIKDVDSLEEKVITLDV+EGVELLEASLQSKTVLTNAFLKRRR HID+D
Sbjct: 181 DFSITTLLKKFNIKDVDSLEEKVITLDVDEGVELLEASLQSKTVLTNAFLKRRRPHIDSD 240

Query: 241 VKLSGSLSPSV 250
           VKLS SL+PSV
Sbjct: 241 VKLSESLNPSV 250

[Close]

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL
Match: A0A0A0KLM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180840 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.1e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 94  MPNVDVVPAAATPPAIFYCVTGSYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQP 153
           MPNVDVVPAAATPPAIFYCVTGSYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQP
Sbjct: 1   MPNVDVVPAAATPPAIFYCVTGSYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQP 60

Query: 154 APDRGFVKDLATYIVTDDLTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELL 213
           APDRGFVKDLATYIVTDDLTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELL
Sbjct: 61  APDRGFVKDLATYIVTDDLTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELL 120

Query: 214 EASLQSKTVLTNAFLKRRRSHIDNDVKLSGSLSPSV 250
           EASLQSKTVLTNAFLKRRRSHIDNDVKLSGSLSPSV
Sbjct: 121 EASLQSKTVLTNAFLKRRRSHIDNDVKLSGSLSPSV 156

[Close]

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 1   MEQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLY 60
           M   +V LKLLID K +RVL+GEADK  IDFL N+LSLPLG VIRLLKK GMVGCLGNLY
Sbjct: 1   MASANVRLKLLIDSKEQRVLFGEADKNVIDFLFNLLSLPLGTVIRLLKKQGMVGCLGNLY 60

Query: 61  ESVETLNNSYLQPNQSRDIVLKPKIVF--NSFTKLMPNVDVVPAAATPPAIFYCVTGSY- 120
           ESVETLN++YLQPNQS+DI+LKPK+ F  +S T L+PN+D+  AA T    + C + ++ 
Sbjct: 61  ESVETLNDTYLQPNQSKDILLKPKVSFCGSSSTMLLPNIDLSAAATT---FYLCNSTAHA 120

Query: 121 -CRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPA-----PDRGFVKDLATYIVTDD 180
            CR  VS   +A CP C+  ++Q   +V PP A           + GFVK + TY+V DD
Sbjct: 121 NCRRSVSDGPNAICPKCNVPMTQVGTFVKPPSASATTVAAAKEDEGGFVKGVVTYMVMDD 180

Query: 181 LTVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRR 232
           L+VK +S  S   LL KFN+K+V +LEEKV+TLDVNEGV+LL+ASL SKTVLT+ F++R+
Sbjct: 181 LSVKPMSTISSIALLNKFNVKEVGALEEKVVTLDVNEGVKLLKASLHSKTVLTDVFIRRK 237

[Close]

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 133/231 (57.58%), Postives = 166/231 (71.86%), Query Frame = 0


Query: 5   DVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDGMVGCLGNLYESVE 64
           +V LKLLID + +RVL+GEADK  IDFL N+LSLPLG VIRLLKK GMVG L NLYESVE
Sbjct: 7   EVRLKLLIDSEQKRVLFGEADKNLIDFLFNLLSLPLGTVIRLLKKQGMVGSLANLYESVE 66

Query: 65  TLNNSYLQPNQSRDIVLKPKIVFNSFTKLMPNVDVVPAAATPPAIFYCVTGSYCRGYVSY 124
            LN++YLQPNQS+D +LKPK+ F++ T L+PN++   + A     + C  G+ C   V+ 
Sbjct: 67  ALNDTYLQPNQSKDNLLKPKVSFSASTLLLPNIE---SYADKKKFYLC--GNRCGYNVAS 126

Query: 125 SCSAFCPSCSKNLSQACRYVTPPKAGNQPAPD----RGFVKDLATYIVTDDLTVKHISDF 184
           + +A CPSC   +S+ C  V PP A  Q   D     GFVK + TY+V DDL+VK +S  
Sbjct: 127 NPTAVCPSCRNAMSRECALVNPPNANTQATQDVGEFGGFVKGVVTYMVMDDLSVKPMSTI 186

Query: 185 SITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRR 232
           S  TLL KFNIK+V +LEEKVITLDVN+GV+LL ASLQSKTVLT+ FL R+
Sbjct: 187 SSITLLNKFNIKEVGALEEKVITLDVNQGVKLLRASLQSKTVLTDVFLGRK 232

[Close]

BLAST of CsaV3_5G006840.1 vs. TAIR 10
Match: AT5G01130.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18
Identity = 78/253 (30.83%), Postives = 119/253 (47.04%), Query Frame = 0


Query: 2   EQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKKDG-----MVGCL 61
           E+  V+L+L ID++  +V+  EA K F+D L ++L+LP+G +IRLL++        VGC 
Sbjct: 6   EEPKVSLRLFIDEEKNKVVLAEASKAFVDVLFSLLTLPMGTIIRLLEEHRESQPITVGCF 65

Query: 62  GNLYESVETLNNSYLQPNQSRDIVLKPKIVFN-SFTKLMPNVDVVPAAATPPAIFYCVTG 121
            NLY SV  +     + +  + I+L P+ V +  + +LM N++      T   +F C   
Sbjct: 66  SNLYRSVAEMGIDNFKTDVCKHILLHPRSVRDLQYKRLMLNIN-----PTEVKLFKCPIS 125

Query: 122 SYCRGYVSYSCS-AFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTV 181
             C  Y  +S S   C S      Q  R V  P A +      G       +I+TDDL V
Sbjct: 126 --CNFYSHFSTSRCQCGSSMNKEFQEPRVV--PVASSIQNDVNG------VFIITDDLKV 185

Query: 182 KHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSH 241
              S   +   LK     D+  L E ++ +   E + LLE    SK  LTN FL ++   
Sbjct: 186 AVRSTDVVLNELKSLGSGDISKLREMLVYIGFEEVLTLLECMFSSKAPLTNTFLNKQTFQ 243

Query: 242 IDNDVKLSGSLSP 248
                K+  +LSP
Sbjct: 246 GQGVTKVYETLSP 243

[Close]

BLAST of CsaV3_5G006840.1 vs. TAIR 10
Match: AT5G01120.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-17
Identity = 67/240 (27.92%), Postives = 117/240 (48.75%), Query Frame = 0


Query: 2   EQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLK-----KDGMVGCL 61
           E + + LKLLID++  +V++ EA   F+D L +  +LP+G ++RLL+     +   +GC 
Sbjct: 6   ENSVINLKLLIDEEKNKVVFAEAGTDFVDILFSFSTLPMGTIVRLLEMHHKSRSIAIGCF 65

Query: 62  GNLYESVETLNNSYLQPNQSRDIVLKP-KIVFNSFTKLMPNVDVVPAAATPPAIFYCVTG 121
            N+Y SV ++   +      + ++L P  +  +    +   +D   A        +  +G
Sbjct: 66  NNIYASVVSMGMKHFSTQACKQMLLFPGSLNQDKCQNMKLKIDDSEATKCFMCPMFVRSG 125

Query: 122 SYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLAT-YIVTDDLTV 181
              +GY ++  S  C SC   + +  ++      GN    +  FV+   T +I+TDDL V
Sbjct: 126 QCSKGYSNFKTSR-C-SCGNFMDEVIQFQGEGGRGNGSQAE-VFVRGAHTSFIITDDLKV 185

Query: 182 KHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSH 235
           +  S  S   +LK     D D L E ++ +++ E   LL     S T LT+ FLK++ SH
Sbjct: 186 QVNSVGSTLNVLKDLAYADCDKLVEMILEVNLQEVATLLVCLFTSDTPLTDTFLKKKSSH 242

[Close]

BLAST of CsaV3_5G006840.1 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 68/238 (28.57%), Postives = 112/238 (47.06%), Query Frame = 0


Query: 2   EQTDVTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLKK-----DGMVGCL 61
           E+   +L+LLID++  RV+  EA K F+D L ++L+LP+G ++RLL+K       +VGCL
Sbjct: 6   EKPKFSLRLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCL 65

Query: 62  GNLYESVETLNNSYLQPNQSRDIVLKPKIVFNSFTK-LMPNVDVVPAAATPPAIFYC--- 121
            NLY+SV  ++    +    +  +L P+    S  + L  N+D   A       F C   
Sbjct: 66  HNLYKSVADMDVDNFESQACKHFLLHPRSAKGSHGRDLKLNIDDTEAT----KFFVCPNF 125

Query: 122 VTGSYCRGYVSYSCSAFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDL 181
           V+   CR   S   +  C  C  ++ +            +   D  F     ++++TDDL
Sbjct: 126 VSTEACRKLFSNVSTMKC-RCGSSMHREIPV-------EEQQADGVFPSCRTSFVITDDL 185

Query: 182 TVKHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKR 231
            V   S   +  +L  F     D L+E +I +   E + LL     S+  LT+ FL++
Sbjct: 186 KVALNSMGLVLNVLNDFGYSGFDKLQEMLIDVGFEEILTLLGCLFTSEAPLTDTFLRK 231

[Close]

BLAST of CsaV3_5G006840.1 vs. TAIR 10
Match: AT5G43240.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 72.0 bits (175), Expect = 7.6e-13
Identity = 66/240 (27.50%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 6   VTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLK-----KDGMVGCLGNLY 65
           + LKLLID++  +V++ EA K F+D L +  +LP+G ++RLL+     +   +GC  N+Y
Sbjct: 10  IKLKLLIDEEKNKVVFVEAGKDFVDLLFSFFTLPMGTIVRLLEMYKKSQKIAIGCFSNIY 69

Query: 66  ESVETLNNSYLQPNQSRDIVLKP-KIVFNSFTKLMPNVDVVPAAATPPAIFYC---VTGS 125
            SV ++   +      + ++L P  +       L   VD   A       F C   V   
Sbjct: 70  ASVVSMGIEHFLTEACKQMLLYPGSLNHEKCRNLKLRVDDSEAT----KYFVCPKFVERE 129

Query: 126 YC-RGYVSYSCS-AFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTV 185
            C   Y +++ S   C      ++Q         AGN          D  ++++TDDL V
Sbjct: 130 QCTESYSNFNTSRCSCGVLMNEVTQLDGRGGLASAGNGVEGGVFVRSDHTSFMITDDLKV 189

Query: 186 KHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSH 235
           +  S      +LK     D + L+EK+  +++ E   LLE    S   LT+ FLK++ S+
Sbjct: 190 EITSVRLTLNVLKDLGYVDCEKLDEKIHDVNLEEVPTLLECLSTSDNPLTDTFLKKKSSY 245

[Close]

BLAST of CsaV3_5G006840.1 vs. TAIR 10
Match: AT5G43240.3 (Protein of unknown function (DUF674) )

HSP 1 Score: 72.0 bits (175), Expect = 7.6e-13
Identity = 66/240 (27.50%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 6   VTLKLLIDKKTERVLYGEADKKFIDFLVNVLSLPLGGVIRLLK-----KDGMVGCLGNLY 65
           + LKLLID++  +V++ EA K F+D L +  +LP+G ++RLL+     +   +GC  N+Y
Sbjct: 10  IKLKLLIDEEKNKVVFVEAGKDFVDLLFSFFTLPMGTIVRLLEMYKKSQKIAIGCFSNIY 69

Query: 66  ESVETLNNSYLQPNQSRDIVLKP-KIVFNSFTKLMPNVDVVPAAATPPAIFYC---VTGS 125
            SV ++   +      + ++L P  +       L   VD   A       F C   V   
Sbjct: 70  ASVVSMGIEHFLTEACKQMLLYPGSLNHEKCRNLKLRVDDSEAT----KYFVCPKFVERE 129

Query: 126 YC-RGYVSYSCS-AFCPSCSKNLSQACRYVTPPKAGNQPAPDRGFVKDLATYIVTDDLTV 185
            C   Y +++ S   C      ++Q         AGN          D  ++++TDDL V
Sbjct: 130 QCTESYSNFNTSRCSCGVLMNEVTQLDGRGGLASAGNGVEGGVFVRSDHTSFMITDDLKV 189

Query: 186 KHISDFSITTLLKKFNIKDVDSLEEKVITLDVNEGVELLEASLQSKTVLTNAFLKRRRSH 235
           +  S      +LK     D + L+EK+  +++ E   LLE    S   LT+ FLK++ S+
Sbjct: 190 EITSVRLTLNVLKDLGYVDCEKLDEKIHDVNLEEVPTLLECLSTSDNPLTDTFLKKKSSY 245

The following BLAST results are available for this feature:

BLAST of CsaV3_5G006840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741245.1	2.1e-134	100.00	uncharacterized protein LOC105435653 [Cucumis sativus] >KAE8647978.1 hypothetica...	[more]
XP_008465479.1	5.7e-111	86.85	PREDICTED: uncharacterized protein LOC103503094 [Cucumis melo] >KAA0062236.1 put...	[more]
XP_022138964.1	2.7e-60	56.67	uncharacterized protein LOC111010013 [Momordica charantia]	[more]
XP_008461735.1	1.1e-58	57.58	PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF...	[more]
XP_004147723.1	2.0e-55	55.65	uncharacterized protein LOC101207526 [Cucumis sativus]	[more]

BLAST of CsaV3_5G006840.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G006840.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V731	2.7e-111	86.85	Putative DNA polymerase zeta catalytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CPD6	2.7e-111	86.85	uncharacterized protein LOC103503094 OS=Cucumis melo OX=3656 GN=LOC103503094 PE=...	[more]
A0A0A0KLM0	1.1e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180840 PE=4 SV=1	[more]
A0A6J1CBJ8	1.3e-60	56.67	uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7U8V2	5.4e-59	57.58	DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CsaV3_5G006840.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01130.1	2.1e-18	30.83	Protein of unknown function (DUF674)	[more]
AT5G01120.1	6.6e-17	27.92	Protein of unknown function (DUF674)	[more]
AT3G09110.1	1.2e-15	28.57	Protein of unknown function (DUF674)	[more]
AT5G43240.1	7.6e-13	27.50	Protein of unknown function (DUF674)	[more]
AT5G43240.3	7.6e-13	27.50	Protein of unknown function (DUF674)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007750	Protein of unknown function DUF674	PFAM	PF05056	DUF674	coord: 3..235 e-value: 1.2E-48 score: 166.2
IPR007750	Protein of unknown function DUF674	PANTHER	PTHR33103	OS01G0153900 PROTEIN	coord: 3..231
None	No IPR available	PANTHER	PTHR33103:SF50	OS01G0154200 PROTEIN	coord: 3..231

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_5G006840	CsaV3_5G006840	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G006840.1.exon2	CsaV3_5G006840.1.exon2	exon
CsaV3_5G006840.1.exon1	CsaV3_5G006840.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G006840.1.cds2	CsaV3_5G006840.1.cds2	CDS
CsaV3_5G006840.1.cds1	CsaV3_5G006840.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G006840.1	CsaV3_5G006840.1-protein	polypeptide