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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA mRNA sequence TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA Coding sequence (CDS) TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA Protein sequence CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLLSDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG*
Homology
BLAST of CsaV3_3G006430.1 vs. NCBI nr
Match: KAE8650183.1 (hypothetical protein Csa_011011, partial [Cucumis sativus]) HSP 1 Score: 184.5 bits (467), Expect = 4.2e-43 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
Query: 1 CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60
CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL
Sbjct: 1 CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60
Query: 61 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 93
SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG
Sbjct: 61 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 92
BLAST of CsaV3_3G006430.1 vs. ExPASy TrEMBL
Match: A0A0A0L3A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110015 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
Query: 1 CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60
CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL
Sbjct: 37 CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 96
Query: 61 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 93
SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG
Sbjct: 97 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 128
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650183.1 | 4.2e-43 | 100.00 | hypothetical protein Csa_011011, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L3A6 | 2.0e-43 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110015 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G006430.1.exon1 | CsaV3_3G006430.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G006430.1.cds1 | CsaV3_3G006430.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G006430.1 | CsaV3_3G006430.1-protein | polypeptide |
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