CsaV3_3G006430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G006430
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 5575154 .. 5575432 (+)
RNA-Seq ExpressionCsaV3_3G006430
SyntenyCsaV3_3G006430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA

mRNA sequence

TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA

Coding sequence (CDS)

TGCGTTGAATTCGCAATACCTACACAAAATGTAAATTACATCACCAACATAGATGACCTTGTTCGAATTGTAACGCAATACACATCAGAATCATCCAACATTGTCTCACCCCTCCTTGAGTTCTTTCATTCCTTGGGCTTAAATTGGATTATTGTCCAAAAGAAAGGGATCCGACTTCTTTCTGATTCTGACCAATCCTCCTTTTCAGACCCTGCTGCTGATTCTCGATATTCTCGACGGTCTTTAAACTTCCCTTCACACTTAACATCAAACGGATGA

Protein sequence

CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLLSDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG*
Homology
[Close]
BLAST of CsaV3_3G006430 vs. NCBI nr
Match: KAE8650183.1 (hypothetical protein Csa_011011, partial [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 4.2e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60
          CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL
Sbjct: 1  CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60

Query: 61 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 93
          SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG
Sbjct: 61 SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 92

[Close]
BLAST of CsaV3_3G006430 vs. ExPASy TrEMBL
Match: A0A0A0L3A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110015 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1   CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 60
           CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL
Sbjct: 37  CVEFAIPTQNVNYITNIDDLVRIVTQYTSESSNIVSPLLEFFHSLGLNWIIVQKKGIRLL 96

Query: 61  SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 93
           SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG
Sbjct: 97  SDSDQSSFSDPAADSRYSRRSLNFPSHLTSNG 128

The following BLAST results are available for this feature:
BLAST of CsaV3_3G006430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650183.14.2e-43100.00hypothetical protein Csa_011011, partial [Cucumis sativus][more]
BLAST of CsaV3_3G006430 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G006430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3A62.0e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110015 PE=4 SV=1[more]
BLAST of CsaV3_3G006430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G006430.1CsaV3_3G006430.1mRNA