Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCTCCAGTGATGGCCTTTGTTTTAGTCTCATTAACCTTCTTTTTTCTTAGCTTCCCAATTCTCTCTACATCTGCTGCCCAGCTTCACCCATTGCCTTCTCTTTATCACACAAGAATTGTCCCTCTTCCGCAACCATCACCGTCGTCACTTTTGCCATCGTATGAATTTGAACTGCAAGTAAGGAGAAGGAGAAGGCGGGTACGTTCTCCGCCGCCACCACCACCGCCGCCCAGGTTCCAGTGGCCAAGAAGGCAAACCCGTAGATCACCTCCACCTCCTTTCTAA
ATGAAGTCTCCAGTGATGGCCTTTGTTTTAGTCTCATTAACCTTCTTTTTTCTTAGCTTCCCAATTCTCTCTACATCTGCTGCCCAGCTTCACCCATTGCCTTCTCTTTATCACACAAGAATTGTCCCTCTTCCGCAACCATCACCGTCGTCACTTTTGCCATCGTATGAATTTGAACTGCAAGTAAGGAGAAGGAGAAGGCGGGTACGTTCTCCGCCGCCACCACCACCGCCGCCCAGGTTCCAGTGGCCAAGAAGGCAAACCCGTAGATCACCTCCACCTCCTTTCTAA
ATGAAGTCTCCAGTGATGGCCTTTGTTTTAGTCTCATTAACCTTCTTTTTTCTTAGCTTCCCAATTCTCTCTACATCTGCTGCCCAGCTTCACCCATTGCCTTCTCTTTATCACACAAGAATTGTCCCTCTTCCGCAACCATCACCGTCGTCACTTTTGCCATCGTATGAATTTGAACTGCAAGTAAGGAGAAGGAGAAGGCGGGTACGTTCTCCGCCGCCACCACCACCGCCGCCCAGGTTCCAGTGGCCAAGAAGGCAAACCCGTAGATCACCTCCACCTCCTTTCTAA
MKSPVMAFVLVSLTFFFLSFPILSTSAAQLHPLPSLYHTRIVPLPQPSPSSLLPSYEFELQVRRRRRRVRSPPPPPPPPRFQWPRRQTRRSPPPPF*
Homology
BLAST of CsGy6G017432.1 vs. NCBI nr
Match:
KGN54132.2 (hypothetical protein Csa_021653 [Cucumis sativus])
HSP 1 Score: 121 bits (303), Expect = 2.83e-33
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsGy6G017432.1 vs. NCBI nr
Match:
KAG6578901.1 (hypothetical protein SDJN03_23349, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 89.0 bits (219), Expect = 1.63e-20
Identity = 61/111 (54.95%), Postives = 69/111 (62.16%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
KGN54132.2 2.83e-33 100.00 hypothetical protein Csa_021653 [Cucumis sativus] [more] KAG6578901.1 1.63e-20 54.95 hypothetical protein SDJN03_23349, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
A T G A A G T C T C C A G T G A T G G C C T T T G T T T T A G T C T C A T T A A C C T T C T T T T T T C T T A G C T T C C C A A T T C T C T C T A C A T C T G C T G C C C A G C T T C A C C C A T T G C C T T C T C T T T A T C A C A C A A G A A T T G T C C C T C T T C C G C A A C C A T C A C C G T C G T C A C T T T T G C C A T C G T A T G A A T T T G A A C T G C A A G T A A G G A G A A G G A G A A G G C G G G T A C G T T C T C C G C C G C C A C C A C C A C C G C C G C C C A G G T T C C A G T G G C C A A G A A G G C A A A C C C G T A G A T C A C C T C C A C C T C C T T T C T A A 50 100 150 200 250 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 64..96 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 72..96
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
CsGy6G017432.1.exon1 CsGy6G017432.1.exon1 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
cds.CsGy6G017432.1 cds.CsGy6G017432.1 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
CsGy6G017432.1 CsGy6G017432.1-protein polypeptide
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0046872 metal ion binding
molecular_function
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
