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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGGTAGCACATTCTAACTAGTCCCGCTAAATCGCAGAGCGACACGATAGACAATTCACCACATAGATGGAATATATCTACGCAGCATATGTGCAATGCATCCCACAGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG mRNA sequence ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG Coding sequence (CDS) ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG Protein sequence MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH*
Homology
BLAST of CsGy4G009827.1 vs. NCBI nr
Match: KGN53804.1 (hypothetical protein Csa_014560 [Cucumis sativus]) HSP 1 Score: 102 bits (255), Expect = 2.39e-27 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 1 MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH
Sbjct: 1 MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
BLAST of CsGy4G009827.1 vs. ExPASy TrEMBL
Match: A0A0A0KY76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131180 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 1.16e-27 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 1 MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH
Sbjct: 1 MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
BLAST of CsGy4G009827.1 vs. ExPASy TrEMBL
Match: A0A0A0K820 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G306900 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 3.49e-06 Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0
Query: 1 MVATVNQLSSTVSTMNRLLP----IIVPDLVTPISPLDVPNSPLGNLATCP 47
MVAT+NQL ST+S + LL II P+LVT I PL+VPNSPLG+ TCP
Sbjct: 122 MVATINQLFSTISNRSCLLCVPQLIITPELVTHIRPLNVPNSPLGDATTCP 172
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN53804.1 | 2.39e-27 | 100.00 | hypothetical protein Csa_014560 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KY76 | 1.16e-27 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131180 PE=4 SV=1 | [more] |
| A0A0A0K820 | 3.49e-06 | 60.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G306900 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy4G009827.1.exon1 | CsGy4G009827.1.exon1 | exon |
| CsGy4G009827.1.exon2 | CsGy4G009827.1.exon2 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy4G009827.1 | cds.CsGy4G009827.1 | CDS |
| cds.CsGy4G009827.1 | cds.CsGy4G009827.1_2 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy4G009827.1 | CsGy4G009827.1-protein | polypeptide |
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