CsGy4G009827 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G009827
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 8202381 .. 8202650 (+)
RNA-Seq ExpressionCsGy4G009827
SyntenyCsGy4G009827
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGGTAGCACATTCTAACTAGTCCCGCTAAATCGCAGAGCGACACGATAGACAATTCACCACATAGATGGAATATATCTACGCAGCATATGTGCAATGCATCCCACAGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG

mRNA sequence

ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG

Coding sequence (CDS)

ATGGTCGCGACGGTAAATCAGTTATCCTCTACGGTATCCACCATGAATCGCTTACTGCCGATCATTGTACCAGATTTAGTGACACCCATTTCTCCTCTCGATGTTCCAAACTCGCCTCTTGGCAACTTAGCAACATGCCCCCTTGCTTCGAAAATGCAACACTAG

Protein sequence

MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH*
Homology
[Close]
BLAST of CsGy4G009827 vs. NCBI nr
Match: KGN53804.1 (hypothetical protein Csa_014560 [Cucumis sativus])

HSP 1 Score: 102 bits (255), Expect = 2.39e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
          MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH
Sbjct: 1  MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54

[Close]
BLAST of CsGy4G009827 vs. ExPASy TrEMBL
Match: A0A0A0KY76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131180 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 1.16e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54
          MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH
Sbjct: 1  MVATVNQLSSTVSTMNRLLPIIVPDLVTPISPLDVPNSPLGNLATCPLASKMQH 54

[Close]
BLAST of CsGy4G009827 vs. ExPASy TrEMBL
Match: A0A0A0K820 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G306900 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.49e-06
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 1   MVATVNQLSSTVSTMNRLLP----IIVPDLVTPISPLDVPNSPLGNLATCP 47
           MVAT+NQL ST+S  + LL     II P+LVT I PL+VPNSPLG+  TCP
Sbjct: 122 MVATINQLFSTISNRSCLLCVPQLIITPELVTHIRPLNVPNSPLGDATTCP 172

The following BLAST results are available for this feature:
BLAST of CsGy4G009827 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G009827 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53804.12.39e-27100.00hypothetical protein Csa_014560 [Cucumis sativus][more]
BLAST of CsGy4G009827 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY761.16e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131180 PE=4 SV=1[more]
A0A0A0K8203.49e-0660.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G306900 PE=4 SV=1[more]
BLAST of CsGy4G009827 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G009827.1CsGy4G009827.1mRNA