CsGy1G015450.2 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G015450.2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	NADH-u_ox-rdase domain-containing protein
Location	Gy14Chr1: 11369114 .. 11371267 (+)
Sequence length	2057
RNA-Seq Expression	CsGy1G015450.2
Synteny	CsGy1G015450.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATACTCATTCATCTGTCAGCTCAGCAGACACTCACTTGATCGTCTTCAACCTCAACGAGTTGGCCAAGCGAGTTTTAGAGAGAGAGGAAGAGCGGCGGAGATCAGCAGCTTTAGCTACGGAGAAGACAAGATGAACACCGACATTACAGCGTCGACCAAGCCAGAGTACCCAGTAGTAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCCGTCACCGTCGGTTATCTTTCCGGTATCAATTTCTTTCTTCCTTTTCCTTTTTTTTTTTTTTTTATCTTCCATTTCGTTGAACCATCTTGAAAATCTCTTCCCCTGACTCTGCATTTTAGGGATTAAGCCCGGGATAAGGGGCCCATCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGATGGCGAGGTAGCTCGTTATAAGAAATAAGATTGTGCGATTTAGGGTTTTTTCTTTTTCTCTTTTGCTTTGTTTTCCTCAAATTTGAGTTCTAATTGTGGACATCTTCACGATGTTTCAGTTATTAAGCGTGCAACCGGGTTGTATCAATAAGCAAATTGAAATTTCACTGTTTTCTGTGTTGCCCATTTTTCGTCTAAATGAAATAGTTGAAAAATTACATGATTCTTTGCTTTTGATCAATAAACAAAGGTGACCCATTAAGGGATTTGGACGGATGAATCATATACTCGTCTGTTGTGCCATTGTAAGTTAGTAGTCCGTTTTTAATTCAAAGTGGTCTCATTAGATTACATTTTGTTGTCATATTGCCATGACTACTCTTTATTTCCGCAGAGTATCAGAAAATAGAAAATAGTAGCCTCAAGTGGGAGAAAGATGTCCTTTATGATTGTATCAAAAGAGTACCCCAACGCCAAATGATCTTGAAAAATTATTCTGTTGCATTTACTTCGGTAGTTTTTCATCTGATCTTTTGTGCTTTATTAGTTGCATTTCATCCTTCTAGCAGTCTTGTGTGCTCTAATTATGTGGTTGTCATCTACATATGGTAATGCACTTCAGAGTAATGGGCAGATATTGATCGTTCATATCAGGTTTTTTGTTGCTTTTCCTTTATATGGCAGTGACAACTATTTAGGAGGGTAGATTATTTGCAGAAGTTGTCTAGAAATCTGGTGATGAATATGAAGTTTGTTTGTTTGAGCCTTTGGATGTTTATCAATTCCTGAGAAAGTTTAAGCAAAATTGCCGCTCAATTTTGTTTTTTCTTCCTTTGCTTGTTACTCTTTTCCCCCTATGGCCTTTTATTTCGGGAGAACAAGTGTTCAAATATTTTTCTTTCATGTGTTGCAATTTGTTGAGGTTAATTTAGAAATGCTTCTTGATGTTTTATATGTTCTCTTTCCATGTAAAAGGATAGCTTCCATTTGCAAGTTCCTATGGCTGAGGGACATTAAGCCATCTACTATTTTGTGCTTAATTTCATTGGATGAAAGGGTAATGTATGATGTAGATTATACTTGTTGCAGCTATATATCATCTATCATCTCTCATTCTGACAGTGATGAAGAAATCTTGGTTATGTATTACGATTTCTTCTTCCCAATAGAGGGGGGTTGAGGATTTGCATCATTGGTGAGATTTCAGTCTTTGTATGGTCTGGAATAAAGAAGGCTGTATGAGTGACCAGTTTATAAAGTCTGTTTTGTTTATTATCACAAATGTGGGAGTGGGAGGTTAAACTTCCAATCTTCATAGATATTTCAACCACTAAGTTATGGTTGTGTTTACTACGATGAATTTCATATTTTTCAGTATGTAGAACCTTTTTTTGTTGTTCCTTTCGGTGTCGATCCTCCAAAATCTTATCACGAAAGTGTAACCAAGATGTTGAAAACAATCAGATGAAATAGATGGATTGTTTGGGTTCAAAGATGAAATAGATGGATTGTTTGGGTTCAAGTCGCATTTGAGATAAGTAATTATGTTCACTAACCTATGTTCAGATTGGCAAAAGTTCTTATGGGTTATATCATCATATAACATCCCCCCTTAAGTTGGACAAGTGGTTGAAGTCTAAATTAATT

mRNA sequence

ATGAAATACTCATTCATCTGTCAGCTCAGCAGACACTCACTTGATCGTCTTCAACCTCAACGAGTTGGCCAAGCGAGTTTTAGAGAGAGAGGAAGAGCGGCGGAGATCAGCAGCTTTAGCTACGGAGAAGACAAGATGAACACCGACATTACAGCGTCGACCAAGCCAGAGTACCCAGTAGTAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCCGTCACCGTCGGTTATCTTTCCGGGATTAAGCCCGGGATAAGGGGCCCATCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGATGGCGAGGTAGCTCGTTATAAGAAATAAGATTGTGCGATTTAGGGTTTTTTCTTTTTCTCTTTTGCTTTGTTTTCCTCAAATTTGAGTTCTAATTGTGGACATCTTCACGATGTTTCAGTTATTAAGCGTGCAACCGGGTTGTATCAATAAGCAAATTGAAATTTCACTGTTTTCTGTGTTGCCCATTTTTCGTCTAAATGAAATAGTTGAAAAATTACATGATTCTTTGCTTTTGATCAATAAACAAAGGTGACCCATTAAGGGATTTGGACGGATGAATCATATACTCGTCTGTTGTGCCATTGTAAGTTAGTAGTCCGTTTTTAATTCAAAGTGGTCTCATTAGATTACATTTTGTTGTCATATTGCCATGACTACTCTTTATTTCCGCAGAGTATCAGAAAATAGAAAATAGTAGCCTCAAGTGGGAGAAAGATGTCCTTTATGATTGTATCAAAAGAGTACCCCAACGCCAAATGATCTTGAAAAATTATTCTGTTGCATTTACTTCGGTAGTTTTTCATCTGATCTTTTGTGCTTTATTAGTTGCATTTCATCCTTCTAGCAGTCTTGTGTGCTCTAATTATGTGGTTGTCATCTACATATGGTAATGCACTTCAGAGTAATGGGCAGATATTGATCGTTCATATCAGGTTTTTTGTTGCTTTTCCTTTATATGGCAGTGACAACTATTTAGGAGGGTAGATTATTTGCAGAAGTTGTCTAGAAATCTGGTGATGAATATGAAGTTTGTTTGTTTGAGCCTTTGGATGTTTATCAATTCCTGAGAAAGTTTAAGCAAAATTGCCGCTCAATTTTGTTTTTTCTTCCTTTGCTTGTTACTCTTTTCCCCCTATGGCCTTTTATTTCGGGAGAACAAGTGTTCAAATATTTTTCTTTCATGTGTTGCAATTTGTTGAGGTTAATTTAGAAATGCTTCTTGATGTTTTATATGTTCTCTTTCCATGTAAAAGGATAGCTTCCATTTGCAAGTTCCTATGGCTGAGGGACATTAAGCCATCTACTATTTTGTGCTTAATTTCATTGGATGAAAGGGTAATGTATGATGTAGATTATACTTGTTGCAGCTATATATCATCTATCATCTCTCATTCTGACAGTGATGAAGAAATCTTGGTTATGTATTACGATTTCTTCTTCCCAATAGAGGGGGGTTGAGGATTTGCATCATTGGTGAGATTTCAGTCTTTGTATGGTCTGGAATAAAGAAGGCTGTATGAGTGACCAGTTTATAAAGTCTGTTTTGTTTATTATCACAAATGTGGGAGTGGGAGGTTAAACTTCCAATCTTCATAGATATTTCAACCACTAAGTTATGGTTGTGTTTACTACGATGAATTTCATATTTTTCAGTATGTAGAACCTTTTTTTGTTGTTCCTTTCGGTGTCGATCCTCCAAAATCTTATCACGAAAGTGTAACCAAGATGTTGAAAACAATCAGATGAAATAGATGGATTGTTTGGGTTCAAAGATGAAATAGATGGATTGTTTGGGTTCAAGTCGCATTTGAGATAAGTAATTATGTTCACTAACCTATGTTCAGATTGGCAAAAGTTCTTATGGGTTATATCATCATATAACATCCCCCCTTAAGTTGGACAAGTGGTTGAAGTCTAAATTAATT

Coding sequence (CDS)

ATGAAATACTCATTCATCTGTCAGCTCAGCAGACACTCACTTGATCGTCTTCAACCTCAACGAGTTGGCCAAGCGAGTTTTAGAGAGAGAGGAAGAGCGGCGGAGATCAGCAGCTTTAGCTACGGAGAAGACAAGATGAACACCGACATTACAGCGTCGACCAAGCCAGAGTACCCAGTAGTAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCCGTCACCGTCGGTTATCTTTCCGGGATTAAGCCCGGGATAAGGGGCCCATCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGATGGCGAGGTAGCTCGTTATAAGAAATAA

Protein sequence

MKYSFICQLSRHSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK*

Homology

[Close]

BLAST of CsGy1G015450.2 vs. NCBI nr
Match: XP_011654950.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus] >XP_031745943.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucumis sativus])

HSP 1 Score: 206 bits (524), Expect = 3.37e-66
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. NCBI nr
Match: XP_008463609.1 (PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo] >XP_038894012.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Benincasa hispida])

HSP 1 Score: 206 bits (523), Expect = 4.79e-66
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. NCBI nr
Match: XP_022142552.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia] >XP_022925305.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_022966760.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023001508.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023541604.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo] >KAG6573532.1 hypothetical protein SDJN03_27419, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012647.1 hypothetical protein SDJN02_25399 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204 bits (519), Expect = 1.95e-65
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. NCBI nr
Match: XP_022927362.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_023520383.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (517), Expect = 3.94e-65
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGR+MGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRIMGFFPNEGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. NCBI nr
Match: KAG7019380.1 (hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 4.59e-64
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGR+MGFFPN+ EVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRIMGFFPNEDEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL
Match: A0A0A0LT27 (NADH-u_ox-rdase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181470 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 1.23e-100
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MKYSFICQLSRHSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPV 60
           MKYSFICQLSRHSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPV
Sbjct: 1   MKYSFICQLSRHSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPV 60

Query: 61  VDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFM 120
           VDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFM
Sbjct: 61  VDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFM 120

Query: 121 YAYQNSAGRLMGFFPNDGEVARYKK 145
           YAYQNSAGRLMGFFPNDGEVARYKK
Sbjct: 121 YAYQNSAGRLMGFFPNDGEVARYKK 145

[Close]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL
Match: A0A1S3CJL9 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103501718 PE=4 SV=1)

HSP 1 Score: 206 bits (523), Expect = 2.32e-66
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL
Match: A0A6J1HSH8 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111466374 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 9.44e-66
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL
Match: A0A6J1CN33 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111012637 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 9.44e-66
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL
Match: A0A6J1EHK1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111432598 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 9.44e-66
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 145
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of CsGy1G015450.2 vs. TAIR 10
Match: AT4G16450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 6.1e-47
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITA  K +YPVVDRNP FTKVVGNF TLDYLRF TITG+SVTVGYLSGIKPGI+GP
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 146
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA Y+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQK 100

[Close]

BLAST of CsGy1G015450.2 vs. TAIR 10
Match: AT4G16450.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 184.5 bits (467), Expect = 6.1e-47
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 46  MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 105
           MNTDITA  K +YPVVDRNP FTKVVGNF TLDYLRF TITG+SVTVGYLSGIKPGI+GP
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60

Query: 106 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 146
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA Y+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQK 100

The following BLAST results are available for this feature:

BLAST of CsGy1G015450.2 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G015450.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654950.1	3.37e-66	100.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus] >XP_031745943....	[more]
XP_008463609.1	4.79e-66	99.00	PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo] >XP_03...	[more]
XP_022142552.1	1.95e-65	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia] >XP_022925...	[more]
XP_022927362.1	3.94e-65	97.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_02...	[more]
KAG7019380.1	4.59e-64	96.00	hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy1G015450.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT27	1.23e-100	100.00	NADH-u_ox-rdase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G18...	[more]
A0A1S3CJL9	2.32e-66	99.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HSH8	9.44e-66	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1CN33	9.44e-66	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EHK1	9.44e-66	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CsGy1G015450.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16450.1	6.1e-47	89.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photores...	[more]
AT4G16450.2	6.1e-47	89.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photores...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019721	NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal	PFAM	PF10785	NADH-u_ox-rdase	coord: 56..134 e-value: 1.0E-19 score: 71.0
None	No IPR available	PANTHER	PTHR34062:SF2	NADH-UBIQUINONE OXIDOREDUCTASE 20.9 KDA SUBUNIT-LIKE	coord: 46..144
None	No IPR available	PANTHER	PTHR34062	OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATED	coord: 46..144

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G015450	CsGy1G015450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G015450.2.exon1	CsGy1G015450.2.exon1	exon
CsGy1G015450.2.exon2	CsGy1G015450.2.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy1G015450.2	cds.CsGy1G015450.2	CDS
cds.CsGy1G015450.2	cds.CsGy1G015450.2_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G015450.2.utr3p1	CsGy1G015450.2.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G015450.2	CsGy1G015450.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I