Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGCATGGGCATTGGCATGAGGCGTTGGGGCTTGGTGCTGGCAGTGGTGGTGGTGGTGATGGCGGTGGCAGTAGGGGAGGTGGCGGCGCTGACGGCGGCGCAGTGTAAGGCGGAGAGAAATATGGCGGTGAAAGAGTGCCTGGCGGTGGTGTTCGGGAGGAACCCGTCACCGGCGTGCTGCCAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCGGCGGTTACGCCTAAGCTGATGACATACGTGGACCCTAATCGCGCCATTCGCCTCATCGAAAGCTGCGGCCGTAAAGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA
mRNA sequence
ATGGTGGGCATGGGCATTGGCATGAGGCGTTGGGGCTTGGTGCTGGCAGTGGTGGTGGTGGTGATGGCGGTGGCAGTAGGGGAGGTGGCGGCGCTGACGGCGGCGCAGTGTAAGGCGGAGAGAAATATGGCGGTGAAAGAGTGCCTGGCGGTGGTGTTCGGGAGGAACCCGTCACCGGCGTGCTGCCAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCGGCGGTTACGCCTAAGCTGATGACATACGTGGACCCTAATCGCGCCATTCGCCTCATCGAAAGCTGCGGCCGTAAAGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA
Coding sequence (CDS)
ATGGTGGGCATGGGCATTGGCATGAGGCGTTGGGGCTTGGTGCTGGCAGTGGTGGTGGTGGTGATGGCGGTGGCAGTAGGGGAGGTGGCGGCGCTGACGGCGGCGCAGTGTAAGGCGGAGAGAAATATGGCGGTGAAAGAGTGCCTGGCGGTGGTGTTCGGGAGGAACCCGTCACCGGCGTGCTGCCAGAGGGCGAGAGTGAGCCATACGGAGTGTATTTGCCCGGCGGTTACGCCTAAGCTGATGACATACGTGGACCCTAATCGCGCCATTCGCCTCATCGAAAGCTGCGGCCGTAAAGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA
Protein sequence
MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSN
Homology
BLAST of Cp4.1LG14g09120.1 vs. NCBI nr
Match:
XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 214 bits (546), Expect = 5.26e-70
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA
Sbjct: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
BLAST of Cp4.1LG14g09120.1 vs. NCBI nr
Match:
XP_023553186.1 (uncharacterized protein LOC111810675 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 207 bits (526), Expect = 5.91e-67
Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MVGMGIGMRRWGLVLAVV VVMAVAVGEVAALT AQCKAER+MAVKECLAVVFG NPSPA
Sbjct: 1 MVGMGIGMRRWGLVLAVVAVVMAVAVGEVAALTPAQCKAERDMAVKECLAVVFGSNPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
BLAST of Cp4.1LG14g09120.1 vs. NCBI nr
Match:
KAG7015694.1 (hypothetical protein SDJN02_23331, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 205 bits (522), Expect = 3.59e-65
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MVGMGIGMRRWGLVLAVV VVMAVAVGEVAALTAAQCKAER+MAVKECL VVFG NPSPA
Sbjct: 1 MVGMGIGMRRWGLVLAVVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCG 108
CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCG
Sbjct: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCG 108
BLAST of Cp4.1LG14g09120.1 vs. NCBI nr
Match:
XP_022923495.1 (uncharacterized protein LOC111431170 [Cucurbita moschata])
HSP 1 Score: 201 bits (511), Expect = 1.11e-64
Identity = 104/109 (95.41%), Postives = 105/109 (96.33%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MVGMGIGMRRWGLVLAV VV MAVAVGEVAALTAAQCKAER+MAVKECL VVFG NPSPA
Sbjct: 1 MVGMGIGMRRWGLVLAVAVV-MAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 108
BLAST of Cp4.1LG14g09120.1 vs. NCBI nr
Match:
KAG6577655.1 (hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 201 bits (510), Expect = 1.85e-64
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 3 GMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACC 62
GMG+GMRRWGLVLAVV MAVAVGEVAALTAAQCKAER+MAVKECLAVVFGRNPSPACC
Sbjct: 13 GMGMGMRRWGLVLAVV---MAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACC 72
Query: 63 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSN 110
QRARVSHTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGSN
Sbjct: 73 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN 117
BLAST of Cp4.1LG14g09120.1 vs. ExPASy TrEMBL
Match:
A0A6J1EBZ9 (uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC111431170 PE=4 SV=1)
HSP 1 Score: 201 bits (511), Expect = 5.38e-65
Identity = 104/109 (95.41%), Postives = 105/109 (96.33%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MVGMGIGMRRWGLVLAV VV MAVAVGEVAALTAAQCKAER+MAVKECL VVFG NPSPA
Sbjct: 1 MVGMGIGMRRWGLVLAVAVV-MAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 108
BLAST of Cp4.1LG14g09120.1 vs. ExPASy TrEMBL
Match:
A0A6J1E6K1 (uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC111431169 PE=4 SV=1)
HSP 1 Score: 198 bits (504), Expect = 6.28e-64
Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
Query: 3 GMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACC 62
GMG+GMRRWGLVLAVV MAVAVGEVAALTAAQCKAER+MAVKECLAVVFGRNPSPACC
Sbjct: 5 GMGMGMRRWGLVLAVV---MAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACC 64
Query: 63 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
QRARVSHTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 65 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 108
BLAST of Cp4.1LG14g09120.1 vs. ExPASy TrEMBL
Match:
A0A6J1HQF4 (uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)
HSP 1 Score: 196 bits (499), Expect = 3.64e-63
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0
Query: 1 MVGMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPA 60
MV +GIGMRRWGLVLAVVVV MAVAVGEVAALTAAQCKAERNMAVKECLAVVFGR+PSPA
Sbjct: 1 MVSIGIGMRRWGLVLAVVVV-MAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRSPSPA 60
Query: 61 CCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
CCQRARVSHTECICPAVT KLMTYVDP+RAIRLIE CGRKVPRHFKCGS
Sbjct: 61 CCQRARVSHTECICPAVTAKLMTYVDPSRAIRLIEGCGRKVPRHFKCGS 108
BLAST of Cp4.1LG14g09120.1 vs. ExPASy TrEMBL
Match:
A0A6J1HN99 (uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)
HSP 1 Score: 194 bits (494), Expect = 2.39e-62
Identity = 99/107 (92.52%), Postives = 102/107 (95.33%), Query Frame = 0
Query: 3 GMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACC 62
GMG+GM+RWGLVL V VV MAVAVGEVAALTAAQCKAER+MAVKECL VVFG NPSPACC
Sbjct: 7 GMGMGMKRWGLVLTVAVV-MAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACC 66
Query: 63 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 67 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112
BLAST of Cp4.1LG14g09120.1 vs. ExPASy TrEMBL
Match:
A0A6J1HJS5 (uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)
HSP 1 Score: 194 bits (494), Expect = 2.39e-62
Identity = 99/107 (92.52%), Postives = 102/107 (95.33%), Query Frame = 0
Query: 3 GMGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACC 62
GMG+GM+RWGLVL V VV MAVAVGEVAALTAAQCKAER+MAVKECL VVFG NPSPACC
Sbjct: 7 GMGMGMKRWGLVLTVAVV-MAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACC 66
Query: 63 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109
QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS
Sbjct: 67 QRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112
BLAST of Cp4.1LG14g09120.1 vs. TAIR 10
Match:
AT4G33550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )
HSP 1 Score: 51.2 bits (121), Expect = 6.1e-07
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 4 MGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVF-----GRNPS 63
MG GM R ++LA+ + + + V A C A + + EC V + PS
Sbjct: 1 MGSGMIRTLVILAIALFM--IGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPS 60
Query: 64 PACCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 110
+CC R C C V+ + Y+D ++ + + SCG+K+P +KCGS
Sbjct: 61 RSCCALIRPIDVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109
BLAST of Cp4.1LG14g09120.1 vs. TAIR 10
Match:
AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )
HSP 1 Score: 51.2 bits (121), Expect = 6.1e-07
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 4 MGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVF-----GRNPS 63
MG GM R ++LA+ + + + V A C A + + EC V + PS
Sbjct: 1 MGSGMIRTLVILAIALFM--IGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPS 60
Query: 64 PACCQRARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 110
+CC R C C V+ + Y+D ++ + + SCG+K+P +KCGS
Sbjct: 61 RSCCALIRPIDVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023553118.1 | 5.26e-70 | 100.00 | uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo] | [more] |
XP_023553186.1 | 5.91e-67 | 96.33 | uncharacterized protein LOC111810675 [Cucurbita pepo subsp. pepo] | [more] |
KAG7015694.1 | 3.59e-65 | 96.30 | hypothetical protein SDJN02_23331, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022923495.1 | 1.11e-64 | 95.41 | uncharacterized protein LOC111431170 [Cucurbita moschata] | [more] |
KAG6577655.1 | 1.85e-64 | 94.44 | hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EBZ9 | 5.38e-65 | 95.41 | uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A6J1E6K1 | 6.28e-64 | 94.39 | uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A6J1HQF4 | 3.64e-63 | 93.58 | uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HN99 | 2.39e-62 | 92.52 | uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HJS5 | 2.39e-62 | 92.52 | uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
AT4G33550.1 | 6.1e-07 | 29.73 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... | [more] |
AT4G33550.2 | 6.1e-07 | 29.73 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... | [more] |