Cp4.1LG14g00020.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g00020.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	(+)-gamma-cadinene synthase-like
Location	Cp4.1LG14: 4784342 .. 4785053 (+)
Sequence length	513
RNA-Seq Expression	Cp4.1LG14g00020.1
Synteny	Cp4.1LG14g00020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTATTGAATTTTGAGATGGGATAGACTTATGATTGATATACTCCTCAAATACATGAAACCTTTATATATAGCAATATTAAATCTTTATAAAGAAATTAACAATGAAATAGGAATGGATGAAAGTTCGCTCCCAATTCATACAACCAAAGGAGAAGTAAGATTTCCTTGTCTCTCTCTCCTATCTTTTTGCCTTCTGTTTTATACATATAAATAAGAGTTATCATTTTGATTTATTTTTACCGATAAAAAAATCTAGCTGAATTCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTTAAAGAGTACATGGAATGGGGATTACATAGCTCGGCTTATTTCTTGGTTATAAGCATTTCACTCATTGGTATAGGTGACATAGTAACAAATGAGGTGATTGAATGGTTTTCTAGAAGACCTAAAGTTATTAAAGCCGCAACAATAATTGACAGACTCATGGATGACCTCGTTTCCCACAAGGTATATATCGTTTACTATCCTTGGAAAGCAGCACACACAAAGTTGATTGTTTTTTAAAGTAAACTGCATTTACTTGTTTTTCTGTTTCAGTTTGAGCAACAAAGGGAACATGTTGCTTCAGCGGTTGAATGTTACATGGAACAATATAGTTGTTCAAAGGAAGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACATAA

mRNA sequence

ATGGTATGGGATAGACTTATGATTGATATACTCCTCAAATACATGAAACCTTTATATATAGCAATATTAAATCTTTATAAAGAAATTAACAATGAAATAGGAATGGATGAAACTGAATTCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTTAAAGAGTACATGGAATGGGGATTACATAGCTCGGCTTATTTCTTGGTTATAAGCATTTCACTCATTGGTATAGGTGACATAGTAACAAATGAGGTGATTGAATGGTTTTCTAGAAGACCTAAAGTTATTAAAGCCGCAACAATAATTGACAGACTCATGGATGACCTCGTTTCCCACAAGGTATATATCGTTTACTATCCTTGGAAAGCAGCACACACAAATTTGAGCAACAAAGGGAACATGTTGCTTCAGCGGTTGAATGTTACATGGAACAATATAGTTGTTCAAAGGAAGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACATAA

Coding sequence (CDS)

ATGGTATGGGATAGACTTATGATTGATATACTCCTCAAATACATGAAACCTTTATATATAGCAATATTAAATCTTTATAAAGAAATTAACAATGAAATAGGAATGGATGAAACTGAATTCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTTAAAGAGTACATGGAATGGGGATTACATAGCTCGGCTTATTTCTTGGTTATAAGCATTTCACTCATTGGTATAGGTGACATAGTAACAAATGAGGTGATTGAATGGTTTTCTAGAAGACCTAAAGTTATTAAAGCCGCAACAATAATTGACAGACTCATGGATGACCTCGTTTCCCACAAGGTATATATCGTTTACTATCCTTGGAAAGCAGCACACACAAATTTGAGCAACAAAGGGAACATGTTGCTTCAGCGGTTGAATGTTACATGGAACAATATAGTTGTTCAAAGGAAGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACATAA

Protein sequence

MVWDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEFYFEEAKWLNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDRLMDDLVSHKVYIVYYPWKAAHTNLSNKGNMLLQRLNVTWNNIVVQRKKLALNFISKWLMHGRT

Homology

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.3e-32
Identity = 71/130 (54.62%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDE---------------TEFYFEEAKW 62
           WDR M+  L  YMKP Y+A+L LY+EI  EI  D+               +E YFEEAKW
Sbjct: 345 WDRSMVHTLPLYMKPFYVAMLELYEEIGKEIDKDQNSLHLQVAIGGIKRLSESYFEEAKW 404

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGD-IVTNEVIEWFSRRPKVIKAATIID 117
           LNK YKP FKEYME  L ++ Y ++ISIS +G+GD IVTNEV++W S  P++IKA+TII 
Sbjct: 405 LNKEYKPSFKEYMELALKTTGYTMLISISFLGLGDHIVTNEVLQWLSNGPQIIKASTIIC 464

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot
Match: B9SCB6 (Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 55/129 (42.64%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WD   ID L +YMK  Y A+LN+Y+EI   +      +               Y  EA W
Sbjct: 327 WDIDCIDQLPEYMKVCYKALLNVYEEIERALSEQGRSYRLHYAKEAMKKLVQAYLVEANW 386

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 117
           +NKNY P   EYM   L S AY L+   S +G+GDI T EV +W S  PK+++ A+II R
Sbjct: 387 MNKNYVPTMDEYMSIALVSCAYPLLTVTSFVGMGDIATKEVFDWASNDPKIVRVASIICR 446

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot
Match: Q6Q3H2 (Valencene synthase OS=Vitis vinifera OX=29760 GN=ValCS PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.5e-20
Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WD   I+ L +YMK  Y+A+L++YKEI  E+  +  ++               YF EAKW
Sbjct: 332 WDINSINQLPEYMKLCYVALLDVYKEIEEEMEKEGNQYRVHYAKEVMKNQVRAYFAEAKW 391

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 117
           L++ + P F+EYM   L SS Y L+ + S +G+G+I T E  +W +  PK++ ++  I R
Sbjct: 392 LHEEHVPAFEEYMRVALASSGYCLLATTSFVGMGEIATKEAFDWVTSDPKIMSSSNFITR 451

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-18
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMD---------------ETEFYFEEAKW 62
           WD   ID L +YM+  Y A+L +Y EI  E+  +               +   Y+EEAKW
Sbjct: 332 WDISAIDQLPEYMRVCYQALLYVYSEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKW 391

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 117
           L     P  +EYM   L +SAY ++ + S +G+GD VT E  +W   +PK+++A+ I+ R
Sbjct: 392 LQVQQIPTMEEYMPVALVTSAYSMLATTSFVGMGDAVTKESFDWIFSKPKIVRASAIVCR 451

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot
Match: O49853 ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum OX=29729 GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-18
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WD   ID L +YMKP Y A+L++YKE+   +     ++               Y  EA+W
Sbjct: 329 WDIKCIDELPEYMKPSYKALLDVYKEMEQLVAEHGRQYRVEYAKNAMIRLAQSYLVEARW 388

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 117
             +NYKP F+E+    L +  Y ++   S +G+GDIVT E  +W +  PK+I+A+TII R
Sbjct: 389 TLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICR 448

[Close]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr
Match: KAG6577411.1 (hypothetical protein SDJN03_24985, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185 bits (470), Expect = 8.76e-55
Identity = 96/129 (74.42%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDET---------------EFYFEEAKW 62
           WDRLMI+IL +YMKPLYI +LNLYKEI+NEIG DE+               E YFEEAKW
Sbjct: 110 WDRLMINILPEYMKPLYIVMLNLYKEISNEIGKDESSPHIGTTKEEIKNLAESYFEEAKW 169

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LNKNYKPKFKEYM+WGL+SS YFLVISISLIG+GDIVTNEVIEWFSRR KV KAA I+ R
Sbjct: 170 LNKNYKPKFKEYMKWGLYSSGYFLVISISLIGMGDIVTNEVIEWFSRRLKVTKAAAIVGR 229

[Close]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr
Match: XP_022985195.1 ((+)-gamma-cadinene synthase-like [Cucurbita maxima])

HSP 1 Score: 178 bits (451), Expect = 1.45e-49
Identity = 91/129 (70.54%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR MI+IL +YMKPLY+ +LNLYKEI+ EIG DE                  YFEEAKW
Sbjct: 337 WDRSMINILPEYMKPLYLTMLNLYKEISKEIGKDECSLHIHSTIEEIKKLAGSYFEEAKW 396

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NYKPKFKEYM+WGLHSS Y LVISISLIG+GDIVTN+VIEWF +RPKV+KAATII R
Sbjct: 397 LNQNYKPKFKEYMKWGLHSSGYSLVISISLIGMGDIVTNKVIEWFFKRPKVVKAATIIAR 456

[Close]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr
Match: XP_022929226.1 ((+)-gamma-cadinene synthase-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 169 bits (428), Expect = 2.17e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 312 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 371

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 372 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 431

[Close]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr
Match: XP_022929225.1 ((+)-gamma-cadinene synthase-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 169 bits (428), Expect = 2.65e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 325 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 384

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 385 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 444

[Close]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr
Match: XP_022929224.1 ((+)-gamma-cadinene synthase-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 169 bits (428), Expect = 3.16e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 337 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 396

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 397 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 456

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL
Match: A0A6J1JAP8 ((+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 7.01e-50
Identity = 91/129 (70.54%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR MI+IL +YMKPLY+ +LNLYKEI+ EIG DE                  YFEEAKW
Sbjct: 337 WDRSMINILPEYMKPLYLTMLNLYKEISKEIGKDECSLHIHSTIEEIKKLAGSYFEEAKW 396

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NYKPKFKEYM+WGLHSS Y LVISISLIG+GDIVTN+VIEWF +RPKV+KAATII R
Sbjct: 397 LNQNYKPKFKEYMKWGLHSSGYSLVISISLIGMGDIVTNKVIEWFFKRPKVVKAATIIAR 456

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL
Match: A0A6J1EMI9 ((+)-gamma-cadinene synthase-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435879 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 1.05e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 312 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 371

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 372 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 431

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL
Match: A0A6J1ETS1 ((+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435879 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 1.28e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 325 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 384

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 385 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 444

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL
Match: A0A6J1EN57 ((+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435879 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 1.53e-46
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIGMDE  F               YFEEAKW
Sbjct: 337 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGMDENSFHVHTTKEEIKKLARSYFEEAKW 396

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NY PKFKEYMEW LHS+ YF +IS++LIG+GDIVTNE++EWF R+PK+I A+TII R
Sbjct: 397 LNQNYTPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNEILEWFFRKPKIINASTIICR 456

[Close]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL
Match: A0A6J1J473 ((+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483269 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 4.16e-45
Identity = 81/129 (62.79%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WDR M+ IL +YMKPLYIA+LN YKEI+ EIG DE                  YFEEAKW
Sbjct: 312 WDRSMVSILPEYMKPLYIAMLNHYKEISKEIGKDENSLHVHTPKEEIKKLARSYFEEAKW 371

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 116
           LN+NYKPKFKEYMEW LHS+ YF +IS++LIG+GDIVTN+++EWF R+PK+I A+TII R
Sbjct: 372 LNENYKPKFKEYMEWALHSTGYFSIISVALIGMGDIVTNKILEWFFRKPKIINASTIICR 431

[Close]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10
Match: AT1G70080.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-13
Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEF---------------YFEEAKW 62
           WD   +D+L  Y+K ++    +L+KE+   +  +   F               Y +EA+W
Sbjct: 385 WDSDAVDVLPDYLKVVFRTTFDLFKELEEYVSSEARSFTMQYAYEQLRILMKGYLQEAEW 444

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 117
            N+ + P  +EY+E G+ S+A  ++++++ I +GD     V EW   RPK+  A  +  R
Sbjct: 445 SNRGHLPSHEEYIEVGVASTAGEVLLAMTFIPMGDAAGVGVYEWLRSRPKLTHALFVKSR 504

[Close]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10
Match: AT5G23960.1 (terpene synthase 21 )

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-11
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 41  YFEEAKWLNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIK 100
           Y +EAKWL K+Y   F EY E  + SS Y+ +I+++ + + D+   +  EW S  PK+  
Sbjct: 376 YMQEAKWLKKDYIATFDEYKENAILSSGYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRV 435

Query: 101 AATIIDRLMDDLVSHK 117
           A+ II R  DD+ S++
Sbjct: 436 ASEIISRFTDDISSYE 451

[Close]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10
Match: AT5G23960.2 (terpene synthase 21 )

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-11
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 41  YFEEAKWLNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIK 100
           Y +EAKWL K+Y   F EY E  + SS Y+ +I+++ + + D+   +  EW S  PK+  
Sbjct: 374 YMQEAKWLKKDYIATFDEYKENAILSSGYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRV 433

Query: 101 AATIIDRLMDDLVSHK 117
           A+ II R  DD+ S++
Sbjct: 434 ASEIISRFTDDISSYE 449

[Close]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10
Match: AT5G44630.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 34/125 (27.20%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEIGMDETEFYFEE---------------AKW 62
           WD   ++ L  +MK  +  ++ L+KE    +      F  E+                KW
Sbjct: 332 WDPDYMENLQGHMKTAFKFVMYLFKEYEEILRSQGRSFVLEKMIEEFKIIARKNLELVKW 391

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 113
               + P F EY+E G      +  I+ S++G+G+I   E  EW   RPK+++      R
Sbjct: 392 ARGGHVPSFDEYIESGGAEIGTYATIACSIMGLGEIGKKEAFEWLISRPKLVRILGAKTR 451

[Close]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10
Match: AT3G32030.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-08
Identity = 45/170 (26.47%), Postives = 75/170 (44.12%), Query Frame = 0


Query: 3   WDRLMIDILLKYMKPLYIAILNLYKEINNEI-----------GMDETE----FYFEEAKW 62
           WD   ID L  Y + +   IL    EI  E+            +DET+     Y   +KW
Sbjct: 378 WDIEAIDELPNYSRIVLRLILETIGEIEREMKPRGRSASVQHTIDETKSLGRAYLALSKW 437

Query: 63  LNKNYKPKFKEYMEWGLHSSAYFLVISISLIGIGDIVTNEVIEWFSRRPKVIKAATIIDR 122
            ++ Y P F EYME G  +         S I + D     + EWF  +PK+++A +++ R
Sbjct: 438 ASEGYMPTFDEYMEVGEVTGGMDDFALYSFIAMEDCDEKPLYEWFDSKPKILQALSVLYR 497

Query: 123 LMDDLVSHKVYIVYYPWKAAHTNLSNKGNMLLQRLNVTWNNIVVQRKKLA 158
           + +D+V+       Y  + +   + N  N  + +  VT    V + +K+A
Sbjct: 498 INNDIVT-------YEREMSKGEVVNGVNSYMNQHGVTKEEAVEELRKMA 540

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g00020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	6.3e-32	54.62	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
B9SCB6	1.9e-20	42.64	Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1	[more]
Q6Q3H2	5.5e-20	38.76	Valencene synthase OS=Vitis vinifera OX=29760 GN=ValCS PE=1 SV=1	[more]
Q6Q3H3	2.3e-18	37.98	(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S...	[more]
O49853	4.0e-18	37.98	(+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum OX=29729 GN=CAD1-C2...	[more]

BLAST of Cp4.1LG14g00020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577411.1	8.76e-55	74.42	hypothetical protein SDJN03_24985, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985195.1	1.45e-49	70.54	(+)-gamma-cadinene synthase-like [Cucurbita maxima]	[more]
XP_022929226.1	2.17e-46	63.57	(+)-gamma-cadinene synthase-like isoform X3 [Cucurbita moschata]	[more]
XP_022929225.1	2.65e-46	63.57	(+)-gamma-cadinene synthase-like isoform X2 [Cucurbita moschata]	[more]
XP_022929224.1	3.16e-46	63.57	(+)-gamma-cadinene synthase-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG14g00020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAP8	7.01e-50	70.54	(+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=...	[more]
A0A6J1EMI9	1.05e-46	63.57	(+)-gamma-cadinene synthase-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ETS1	1.28e-46	63.57	(+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1EN57	1.53e-46	63.57	(+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1J473	4.16e-45	62.79	(+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cp4.1LG14g00020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70080.1	8.8e-13	28.68	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT5G23960.1	6.3e-11	38.16	terpene synthase 21	[more]
AT5G23960.2	6.3e-11	38.16	terpene synthase 21	[more]
AT5G44630.1	2.9e-08	27.20	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G32030.1	3.8e-08	26.47	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 1..137 e-value: 1.9E-26 score: 94.8
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 3..116
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 3..116 e-value: 4.6E-25 score: 88.5
None	No IPR available	PANTHER	PTHR31225:SF134	(-)-GERMACRENE D SYNTHASE-LIKE	coord: 3..117
None	No IPR available	PANTHER	PTHR31225	OS04G0344100 PROTEIN-RELATED	coord: 3..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG14g00020	Cp4.1LG14g00020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00020.1:exon:004	Cp4.1LG14g00020.1:exon:004	exon
Cp4.1LG14g00020.1:exon:003	Cp4.1LG14g00020.1:exon:003	exon
Cp4.1LG14g00020.1:exon:002	Cp4.1LG14g00020.1:exon:002	exon
Cp4.1LG14g00020.1:exon:001	Cp4.1LG14g00020.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00020.1:cds:004	Cp4.1LG14g00020.1:cds:004	CDS
Cp4.1LG14g00020.1:cds:003	Cp4.1LG14g00020.1:cds:003	CDS
Cp4.1LG14g00020.1:cds:002	Cp4.1LG14g00020.1:cds:002	CDS
Cp4.1LG14g00020.1:cds:001	Cp4.1LG14g00020.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00020.1	Cp4.1LG14g00020.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0010334	sesquiterpene synthase activity