Cp4.1LG03g11210.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g11210.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG03: 11156406 .. 11157544 (-)
Sequence length	855
RNA-Seq Expression	Cp4.1LG03g11210.1
Synteny	Cp4.1LG03g11210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACATATATATATAGAGAGAGAATGGAGGTGGGGGGAGATCAAGAGTGAGAATGGAAGATGAGAGGAAAGAGGAGAAGAAAATGGGCAGTAAAATTGAAATGGTTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGGTTCTTCCTCTTACGCTCTCCCTCGACCTCCCTCCTCTCGATTTTACTCTCACCGCTAAATGGTATTACTTATCTGCTCTCGGGTAAGCTTCTCTCTCTCGAGAATTCGAACATCTACCTGTTTTTTCCCTTTTGAGTTTAATTTCACGTAGGTAGAGATTCAAACGGTTAGCCTGTCGGTCAAGTTGTAACTAGTTCAAATATGCCTGTAGAAGTAATTTTTCGTCAATTATTTTTTAAATTTGATTGTTTATGAACGTTATAGACACTGAGAAATGTGGTTTTTCTGACCCAAAATCACGTAGAAGAAAATTAAACGGTATTTTTTTAATAATTTCATGATTTTAAGTATATTATATTTTTTTAGGTATCTTTTGGCGACAAATGTAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAATGACAACATCTTAGTGTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCAGTAGCGGAGCTGCGGCGGCAGTCGGAGTCATCGCTTACCACGGAAACTCACACGTGCAATGGAATAAAGTGTGTGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGAAAAGGCCCAGTTAAATGGGCCGGAATTTGGGCCTGTTTTTAAGCTTCTTCACAGTACATCTAAATGGGCTTTGGCTTTGTTTCTGAATTTCCCCACGGCCCATTTTAAAGCTAATTGGGCTTATTTATAACGCTTGTAGCATCCGAAGGAGACTATTTATGTGAAATATTTTATTTACCCCTCCCTCTCAAACGGAAGTAAATGATAATTTTAAAAGCTGATGTCTAAATTTGTAATTTAATATTTACCCATATGATTTGTATTAAATGA

mRNA sequence

TATACATATATATATAGAGAGAGAATGGAGGTGGGGGGAGATCAAGAGTGAGAATGGAAGATGAGAGGAAAGAGGAGAAGAAAATGGGCAGTAAAATTGAAATGGTTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGGTTCTTCCTCTTACGCTCTCCCTCGACCTCCCTCCTCTCGATTTTACTCTCACCGCTAAATGGTATTACTTATCTGCTCTCGGGTATCTTTTGGCGACAAATGTAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAATGACAACATCTTAGTGTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCAGTAGCGGAGCTGCGGCGGCAGTCGGAGTCATCGCTTACCACGGAAACTCACACGTGCAATGGAATAAAGTGTGTGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGAAAAGGCCCAGTTAAATGGGCCGGAATTTGGGCCTGTTTTTAAGCTTCTTCACAGTACATCTAAATGGGCTTTGGCTTTGTTTCTGAATTTCCCCACGGCCCATTTTAAAGCTAATTGGGCTTATTTATAACGCTTGTAGCATCCGAAGGAGACTATTTATGTGAAATATTTTATTTACCCCTCCCTCTCAAACGGAAGTAAATGATAATTTTAAAAGCTGATGTCTAAATTTGTAATTTAATATTTACCCATATGATTTGTATTAAATGA

Coding sequence (CDS)

ATGGAAGATGAGAGGAAAGAGGAGAAGAAAATGGGCAGTAAAATTGAAATGGTTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGGTTCTTCCTCTTACGCTCTCCCTCGACCTCCCTCCTCTCGATTTTACTCTCACCGCTAAATGGTATTACTTATCTGCTCTCGGGTATCTTTTGGCGACAAATGTAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAATGACAACATCTTAGTGTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCAGTAGCGGAGCTGCGGCGGCAGTCGGAGTCATCGCTTACCACGGAAACTCACACGTGCAATGGAATAAAGTGTGTGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGAAAAGGCCCAGTTAA

Protein sequence

MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS

Homology

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.1e-37
Identity = 88/182 (48.35%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 4   ERKEEKKMGSK------IEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFT 63
           E KE + M +K       +++ R+  F +  VAAIV+ +++QT V+P+ LS  LPPLD  
Sbjct: 5   ESKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVP 64

Query: 64  LTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSS 123
           LTAKW+ +SA+ Y L TN IAC+Y+ +SL   L +      L  L+ +LD  MVALLFS 
Sbjct: 65  LTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSG 124

Query: 124 SGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ 180
           +GAAAAVGV+ Y GNSHV WNKVC+++G+FC Q+AAS  +SL G++ F+LLV++  V L 
Sbjct: 125 NGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLH 184

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.5e-36
Identity = 86/183 (46.99%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 4   ERKEEKKMGSK-------IEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDF 63
           E KE + M +K        +++ R+  F +  VAAIV+ +++QT ++P+ LS   PPL+ 
Sbjct: 5   ESKEREVMVAKPVAVVGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNV 64

Query: 64  TLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFS 123
            LTAKW+ +SA  Y L TN IAC+Y+ +SL   L +      L  L+ +LDT MVALLFS
Sbjct: 65  PLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFS 124

Query: 124 SSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 180
            +GAAAAVG++ Y GNSHV WNKVC+++G+FC Q+AAS  +SL G++ F+LLVV+  V L
Sbjct: 125 GNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRL 184

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.5e-35
Identity = 85/178 (47.75%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 4   ERKEEKKMGSKIE--MVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAK 63
           E +  K+ G +    +V RV  FVL   AAIV G+N QT  +P+ L+  +PPL   + AK
Sbjct: 16  ESRGMKERGGRTNSFLVLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAK 75

Query: 64  WYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAA 123
           W+YLSA  + + +N IACSY+ IS   ++        +V +++ LD +MVALLFSS+GAA
Sbjct: 76  WHYLSAFVFFVVSNAIACSYAAIS---VMLSFCGKKSMVPIILTLDLLMVALLFSSNGAA 135

Query: 124 AAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKR 180
            A+GV+ Y GNSHV+WNKVC+++G+FC QVAAS VLSL G++VF+LLV+L    L  +
Sbjct: 136 TAIGVMGYKGNSHVKWNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNK 190

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-34
Identity = 85/183 (46.45%), Postives = 122/183 (66.67%), Query Frame = 0


Query: 1   MEDERKEEKKM-GSKI---EMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDF 60
           ME + KE K + G K+   ++V RV    L  VAA+++G+++QT V+ L L   LPP+D 
Sbjct: 12  MESKSKEVKVVTGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDV 71

Query: 61  TLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFS 120
            +TAKW YLSA  Y + +N IACSY+ +SL   + ++  +  L L + ++D VMVALLFS
Sbjct: 72  PVTAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFS 131

Query: 121 SSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 180
           S+GAA A+G++ Y GNS V+W KVC+++G+FC QVA +  LS  G + F LLVV+A   L
Sbjct: 132 SNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFAL 191

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 4.6e-33
Identity = 78/167 (46.71%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 13  SKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGYLL 72
           S  +++ RV   VL   AAIV+G+++QT V+P+ +   LP ++  ++AKW+YLSA  Y +
Sbjct: 28  STCDLLLRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSV 87

Query: 73  ATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGN 132
           A+N IACSY+ +SL   +   S    ++ +VI+LD +MVA+LFSS+GAA A+G++ Y GN
Sbjct: 88  ASNAIACSYAALSLVLAV---SGKKGIMSIVIVLDLLMVAMLFSSNGAALAIGLMGYQGN 147

Query: 133 SHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKR 180
           SHV+W KVC ++GRFC QVA S  LSL G+++F+LLV + ++ L K+
Sbjct: 148 SHVRWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKK 191

[Close]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr
Match: XP_023528371.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (866), Expect = 1.53e-116
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA
Sbjct: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA
Sbjct: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP
Sbjct: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180

[Close]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr
Match: XP_022955984.1 (CASP-like protein 1E2 [Cucurbita moschata])

HSP 1 Score: 337 bits (863), Expect = 4.38e-116
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTT+LPLTLSLDLPPLDFTLTA
Sbjct: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLPPLDFTLTA 60

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLSALGYLLATN+IACSYSFISLFFLLKDTSNDNIL+LLVIILDTVMVALLFSSSGA
Sbjct: 61  KWYYLSALGYLLATNIIACSYSFISLFFLLKDTSNDNILILLVIILDTVMVALLFSSSGA 120

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP
Sbjct: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180

[Close]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr
Match: KAG6582239.1 (hypothetical protein SDJN03_22241, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331 bits (849), Expect = 5.97e-114
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEM+FRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDL PLDFTLTA
Sbjct: 1   MEDERKEEKKMGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLHPLDFTLTA 60

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLSALGYLLATN+IACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA
Sbjct: 61  KWYYLSALGYLLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RP
Sbjct: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRP 180

[Close]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr
Match: XP_022979934.1 (CASP-like protein 1E2 [Cucurbita maxima])

HSP 1 Score: 319 bits (817), Expect = 6.40e-109
Identity = 173/181 (95.58%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEMVFRV GFVL FVAAIVVGL+EQTTVLPLTLS DLPPLDFTLTA
Sbjct: 11  MEDERKEEKKMGSKIEMVFRVLGFVLSFVAAIVVGLDEQTTVLPLTLSPDLPPLDFTLTA 70

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLS LGYLLATN+IACSY FISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA
Sbjct: 71  KWYYLSTLGYLLATNIIACSYCFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 130

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAY GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP
Sbjct: 131 AAAVGVIAYLGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 190

[Close]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr
Match: KAG7018638.1 (hypothetical protein SDJN02_20508 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288 bits (737), Expect = 3.91e-97
Identity = 159/171 (92.98%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 11  MGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGY 70
           MGSKIEM+FRVSGFVLCFVAAIVVGLNEQTT+LPLTLSLDL PLDFTLTAKWYYLSALGY
Sbjct: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60

Query: 71  LLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 130
           LLATN+IACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120

Query: 131 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 181
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 164

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL
Match: A0A6J1GXS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457818 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 2.12e-116
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTT+LPLTLSLDLPPLDFTLTA
Sbjct: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLPPLDFTLTA 60

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLSALGYLLATN+IACSYSFISLFFLLKDTSNDNIL+LLVIILDTVMVALLFSSSGA
Sbjct: 61  KWYYLSALGYLLATNIIACSYSFISLFFLLKDTSNDNILILLVIILDTVMVALLFSSSGA 120

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP
Sbjct: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL
Match: A0A6J1IXZ0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479476 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 3.10e-109
Identity = 173/181 (95.58%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MEDERKEEKKMGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTA 60
           MEDERKEEKKMGSKIEMVFRV GFVL FVAAIVVGL+EQTTVLPLTLS DLPPLDFTLTA
Sbjct: 11  MEDERKEEKKMGSKIEMVFRVLGFVLSFVAAIVVGLDEQTTVLPLTLSPDLPPLDFTLTA 70

Query: 61  KWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 120
           KWYYLS LGYLLATN+IACSY FISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA
Sbjct: 71  KWYYLSTLGYLLATNIIACSYCFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGA 130

Query: 121 AAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 180
           AAAVGVIAY GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP
Sbjct: 131 AAAVGVIAYLGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRP 190

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL
Match: A0A1S3AWX9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483799 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.15e-86
Identity = 146/192 (76.04%), Postives = 161/192 (83.85%), Query Frame = 0


Query: 1   MEDERKEEK----KMGS-------KIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSL 60
           ME+ERK E+    KMG+       K+EMVFRV GFVL FVAAIVVGLN QT V+PLT+SL
Sbjct: 12  MEEERKNEEMKKIKMGNYYDNYYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLTVSL 71

Query: 61  DLPPLDFTLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTV 120
           + PPLD+T  AKW+YLSA  YLLATN+IACSYSF+SLF LLK  S DNIL LL+I+LDTV
Sbjct: 72  NTPPLDYTFIAKWHYLSAFVYLLATNIIACSYSFVSLFLLLKKKSKDNILGLLIIVLDTV 131

Query: 121 MVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLV 180
           MVALLFS SGAA AVGVIAY GNSHVQWNKVCDIYGRFC QVAASTVLSLAGAVVFM LV
Sbjct: 132 MVALLFSGSGAAGAVGVIAYQGNSHVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLV 191

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL
Match: A0A0A0LAI6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151490 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 1.37e-86
Identity = 145/189 (76.72%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 1   MEDERKEE--KKMGS------KIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLP 60
           ME+ERK E  KKMG+      K+EMVFRV GFVL FVAAIVVGLN QT V+PL +SL+ P
Sbjct: 10  MEEERKNEEMKKMGNDYDNYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLAVSLNSP 69

Query: 61  PLDFTLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVA 120
           PLD+T  AKW+YLSA  YLLATN+IACSYSF+SLF LLK+ S DNIL LL+I+LDTVMVA
Sbjct: 70  PLDYTFIAKWHYLSAFVYLLATNIIACSYSFLSLFLLLKNKSKDNILGLLIIVLDTVMVA 129

Query: 121 LLFSSSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLA 180
           LLFS SGAA AVGVIAY GN+HVQWNKVCDIYGRFC QVAASTVLSLAGAVVFM LVVLA
Sbjct: 130 LLFSGSGAAGAVGVIAYQGNTHVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLVVLA 189

[Close]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL
Match: A0A6J1FS54 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448322 PE=3 SV=1)

HSP 1 Score: 256 bits (655), Expect = 1.68e-84
Identity = 139/185 (75.14%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 3   DERKEEKKMGSKI------EMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDF 62
           +E +EE+ M   +      +M FR  GFVL  VAAIVVGLN+Q+ V+PLT+SL+LPPLD+
Sbjct: 11  EEEEEEEDMNKNVMLNHMAQMGFRFLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDY 70

Query: 63  TLTAKWYYLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFS 122
           TLTA W+YLSAL YLLATNVIACSYSF+S  FLLK+ + D+IL LLVI+LDTVMVALLFS
Sbjct: 71  TLTANWHYLSALVYLLATNVIACSYSFLSFVFLLKNKNKDSILALLVIVLDTVMVALLFS 130

Query: 123 SSGAAAAVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 181
           SSGAAAAVGVIAYHGNSHVQWNKVCD+YGRFC Q+AASTVLSLAGAVVFMLLVVLA+VGL
Sbjct: 131 SSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGL 190

[Close]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 6   KEEKKMGSK--IEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWY 65
           K +K+ GS+  +E+  RV   VL  VAA V+G+ +QT V+P+ L   LPPL+ + TAK  
Sbjct: 16  KGKKESGSRKGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKAS 75

Query: 66  YLSALGYLLATNVIACSYSFISL-FFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAA 125
           YLSA  Y ++ N IAC Y+ IS+   ++        L++ V+I D +MVALLFSS+GAA 
Sbjct: 76  YLSAFVYNISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAG 135

Query: 126 AVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 177
           A+G++  HGN HV W KVC ++G+FC Q A S  ++L  +VVFMLLVVL  + L
Sbjct: 136 AIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 132.5 bits (332), Expect = 3.4e-31
Identity = 80/174 (45.98%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 6   KEEKKMGSK--IEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWY 65
           K ++++GS+  +E+  RV   +L   AA V+G+ +QT V+ + L   LPPLD T TAK  
Sbjct: 16  KGKRELGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKAS 75

Query: 66  YLSALGYLLATNVIACSYSFISLFFLLKDTSNDNILVLLVIIL-DTVMVALLFSSSGAAA 125
           YLSA  Y ++ N IAC Y+ IS+  L+      +  +L+V++L D VMVALLFS +GAA+
Sbjct: 76  YLSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAAS 135

Query: 126 AVGVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 177
           A+G++  HGN HV W KVC ++G+FC + A S  L+L  AVVFM LVVL  + L
Sbjct: 136 AIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12
Identity = 55/175 (31.43%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 10  KMGSKIEMVFRVSGFVLCFVAAIVVGLNEQT--TVLPLTLSLDLPPLDFTLTAKWYYLSA 69
           K  S  ++V R   F     + +V+  ++QT    LP T  + +P  +FT +       A
Sbjct: 24  KSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT-PIRIPAAEFTNS------PA 83

Query: 70  LGYLLATNVIACSYSFISLFFLL---KDTSNDNILVLLVIILDTVMVALLFSSSGAAAAV 129
           L Y +    +AC YS +S F  +   K  S   +L+L + I+D VMV ++ S++GA   V
Sbjct: 84  LIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGV 143

Query: 130 GVIAYHGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKR 180
             +   GN  V+W K+C IY +FC  V  +  +SL  +VV +LL +++ + L K+
Sbjct: 144 AYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKK 191

[Close]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 46/163 (28.22%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 14  KIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGYLLA 73
           K+ +  R+  F+    AAIV+ LN++T  L +  ++   P+  TLTAK+ +  A  + + 
Sbjct: 17  KLLLGLRIFAFMATLAAAIVMSLNKETKTL-VVATIGTVPIKATLTAKFQHTPAFVFFVI 76

Query: 74  TNVIACSYSFISLFFLL--KDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHG 133
            NV+   ++ + +   +  +      + +L + ILD +   L+ +++ AA  V  +  +G
Sbjct: 77  ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNG 136

Query: 134 NSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATV 175
           N H +WNKVCD +  +C   A + + + AG V+ MLLV   ++
Sbjct: 137 NKHAKWNKVCDRFTTYCDHGAGAIIAAFAG-VILMLLVSAVSI 177

[Close]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 47/170 (27.65%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 15  IEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGYLLAT 74
           +E + R+  F     +AI++G   +T  LP               A++  L AL + +  
Sbjct: 28  LEFILRIVAFFNTIGSAILMGTTHET--LPFFTQF------IRFQAEYNDLPALTFFVVA 87

Query: 75  NVIACSYSFISL-----FFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAY 134
           N +   Y  +SL       + + T N  I   L+IILD  M+ LL S + +AAA+  +A+
Sbjct: 88  NAVVSGYLILSLTLAFVHIVKRKTQNTRI---LLIILDVAMLGLLTSGASSAAAIVYLAH 147

Query: 135 HGNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKR 180
           +GN+   W  +C  +  FC +++ S + S    V+ +LL++L+ + L +R
Sbjct: 148 NGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g11210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6SZP8	4.1e-37	48.35	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6TBD0	4.5e-36	46.99	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9RT04	8.5e-35	47.75	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]
A7NW78	4.2e-34	46.45	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]
B9HMP6	4.6e-33	46.71	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]

BLAST of Cp4.1LG03g11210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528371.1	1.53e-116	100.00	CASP-like protein 1E2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955984.1	4.38e-116	98.34	CASP-like protein 1E2 [Cucurbita moschata]	[more]
KAG6582239.1	5.97e-114	97.79	hypothetical protein SDJN03_22241, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022979934.1	6.40e-109	95.58	CASP-like protein 1E2 [Cucurbita maxima]	[more]
KAG7018638.1	3.91e-97	92.98	hypothetical protein SDJN02_20508 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG03g11210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXS6	2.12e-116	98.34	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457818 PE=3 SV=1	[more]
A0A6J1IXZ0	3.10e-109	95.58	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479476 PE=3 SV=1	[more]
A0A1S3AWX9	1.15e-86	76.04	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483799 PE=3 SV=1	[more]
A0A0A0LAI6	1.37e-86	76.72	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151490 PE=3 SV=1	[more]
A0A6J1FS54	1.68e-84	75.14	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448322 PE=3 SV=1	[more]

BLAST of Cp4.1LG03g11210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	2.0e-31	46.55	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	3.4e-31	45.98	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	2.1e-12	31.43	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	2.5e-10	28.22	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.3e-09	27.65	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 18..173 e-value: 1.3E-36 score: 123.7
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 11..164 e-value: 7.0E-38 score: 129.8
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 7..179
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..179

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG03g11210	Cp4.1LG03g11210	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g11210.1:three_prime_utr:001	Cp4.1LG03g11210.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g11210.1:exon:002	Cp4.1LG03g11210.1:exon:002	exon
Cp4.1LG03g11210.1:exon:001	Cp4.1LG03g11210.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g11210.1:cds:002	Cp4.1LG03g11210.1:cds:002	CDS
Cp4.1LG03g11210.1:cds:001	Cp4.1LG03g11210.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g11210.1:five_prime_utr:001	Cp4.1LG03g11210.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g11210.1	Cp4.1LG03g11210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane