CmoCh16G008750.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008750.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr16: 4698131 .. 4700405 (-)
Sequence length	1956
RNA-Seq Expression	CmoCh16G008750.1
Synteny	CmoCh16G008750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACGCTTAAATTCTTGTCAGCCCTCCAACGAAAGGCCAACCCAAAGGAGATAATAAAGAAATGGCTCATGTTCGTAGATGCAATAATAAACTCCCGACCAAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGGACCCTGGAAAAATGAAAGCTGCTATTGTGGGAGTTTCTAAAAGAGCCCCCTTCAAATTAGGGACCTGGACAGGAGAAATGGACCTTGTCGTGGTCTGCATGGATGACTTCGACGTGGTACTTGGGATGGACTTCCTCCTAGAACACGAAGTTATCCCAATGCCATTGGCGAAATGCTTGGTGATTGTCGACCACAACCCCACAGTGATACCTGCAAGCATCAAGCAACCAGGTAATCTTAGAAAGATCTCGGCCATACAATTGAAAAGAGGACTCGCACAAGAGGAACCTACATTTATGGCTATACCCCTAATGGAAGAAATGACCACTGAGGGAACCGTTCCAAGCAAAATCAAGGAAGTACTAGACAGTTATGCTGACATAATACCAGAGAGCTTACCACAAACACTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTCTCCGGGGTTAAACCCCCAACAAAGAATGCATACCGAATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGATGGCAGGATTCATCCCCCCGACGAAGGAACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGAATGGGGTGTTGCGTCTTTGCATAGACTATAGAGCCTTAAACAAGGTAACGGTACGCAACAAATACCCACTGCCGATAATATCCAACTTGTTTGACCAGCTTCACGGAGCCAAATACTTCACGAAGTTGGACTACGATCAAGGTACTACCAAGTACGTATCGCCGAAGGGGACGAGCCCAAGATGACGTGTGTAACAAGGTATGGGGCCTTTGAATTCCTGATAATGCCCTTTGGTTTGACAAACGCCCCAGCTATGTTCTACATGTTAATGAACCAGGTTTTTTATGAATACTTGGATCAGTTTGTCGTAGTATACCTCGATGACATAGTTATATACAGCACAACCCTGAAGGAGCACAAGGTCACCTGAAGCTAGTGTTTGACAAGCTGTGGCAAAACTAGTTGTACGTCAAGAAAGAAAAATGTGCCTTTGCACAAACATGTATCAACTTCCTTGGACATGTCATCAGTTGTGGACAGATCGGTATAGATAGCAATAAGAATAAAGCTATCCAAGAGTGGAAAATCCCTACTTCAGTATCCTATGTGCGATCCTTCTTAGGATTGGCAAACTACTATAGGTGGTTTGTCGAAGGGTTTTCACAAGGAGCCACCCCATTAACAGAACTCCTAAAGAAAGACCACCCATGGTCGTGGTCAAATGAATGTCAAATGGTCTTTGAAGATCTGAAGGCAACCATGACGAAGGGTCTTGTCTTCGAATTAGTAGATGTTACTAAACCATTTGAAATAGAGACGGATGCTTCCGACTTTGCCCTAGATGGTGTCCTTGTTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGGAAGCTCAATGATGCTGAAAGGAGGTACACTGTCTCCGAAAAAGAAATGTTGGATGTGGCTCATTGCCTACGAGTCTGGAGACAGTACCTCTTGGGATCACAGTTCATAGTGAAGACGGATAACAGCGCCATTTGCCATTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGATGGCAGGAGTCATTGGCTGAATTCGACTTCAAATTCGAACACAAGGCAGGAAAGAGCAACCAAGCAACTGACGTGCTGAGTCGGAAGGGCGAACATGCAGCCCTGTGCATGATAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAAGAACATTTACATAAAAACCCATCTGTCAAAGCCGTCGTTGAACTAGCCAAAGCTGGGAAGACACAACAGTTTTGGATCAAGGGAGACCTTCTAATGACAAAGGGAAACAGATTATACATTCCAAGAACAGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGTCGGACACCCTAGGTGGCAACGAACATACGCCTTAATAAAAAGGGGTACTTCTGGCCAAATATGCGAGACGACATCATGTAGTACACCAAGACATGCCTCATTTGCCAACAGGACAAAGTCGAGAAAGTAA

mRNA sequence

ATGGGTACGCTTAAATTCTTGTCAGCCCTCCAACGAAAGGCCAACCCAAAGGAGATAATAAAGAAATGGCTCATGTTCGTAGATGCAATAATAAACTCCCGACCAAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGGACCCTGGAAAAATGAAAGCTGCTATTGTGGGAGTTTCTAAAAGAGCCCCCTTCAAATTAGGGACCTGGACAGGAGAAATGGACCTTGTCGTGGTCTGCATGGATGACTTCGACGTGGTACTTGGGATGGACTTCCTCCTAGAACACGAAGTTATCCCAATGCCATTGGCGAAATGCTTGGTGATTGTCGACCACAACCCCACAGTGATACCTGCAAGCATCAAGCAACCAGGTAATCTTAGAAAGATCTCGGCCATACAATTGAAAAGAGGACTCGCACAAGAGGAACCTACATTTATGGCTATACCCCTAATGGAAGAAATGACCACTGAGGGAACCGTTCCAAGCAAAATCAAGGAAGTACTAGACAGTTATGCTGACATAATACCAGAGAGCTTACCACAAACACTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTCTCCGGGGTTAAACCCCCAACAAAGAATGCATACCGAATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGATGGCAGGATTCATCCCCCCGACGAAGGAACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGAATGGGGTGTTGCGTCTTTGCATAGACTATAGAGCCTTAAACAAGGTAACGGTACGCAACAAATACCCACTGCCGATAATATCCAACTTGTTTGACCAGCTTCACGGAGCCAAATACTTCACGAAGTTGGACTACGATCAAGGTACTACCAATTGTGGACAGATCGGTATAGATAGCAATAAGAATAAAGCTATCCAAGAGTGGAAAATCCCTACTTCAGTATCCTATGTGCGATCCTTCTTAGGATTGGCAAACTACTATAGGTGGTTTGTCGAAGGGTTTTCACAAGGAGCCACCCCATTAACAGAACTCCTAAAGAAAGACCACCCATGGTCGTGGTCAAATGAATGTCAAATGGTCTTTGAAGATCTGAAGGCAACCATGACGAAGGGTCTTGTCTTCGAATTAGTAGATGTTACTAAACCATTTGAAATAGAGACGGATGCTTCCGACTTTGCCCTAGATGGTGTCCTTGTTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGGAAGCTCAATGATGCTGAAAGGAGGTACACTGTCTCCGAAAAAGAAATGTTGGATGTGGCTCATTGCCTACGAGTCTGGAGACAGTACCTCTTGGGATCACAGTTCATAGTGAAGACGGATAACAGCGCCATTTGCCATTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGATGGCAGGAGTCATTGGCTGAATTCGACTTCAAATTCGAACACAAGGCAGGAAAGAGCAACCAAGCAACTGACGTGCTGAGTCGGAAGGGCGAACATGCAGCCCTGTGCATGATAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAAGAACATTTACATAAAAACCCATCTGTCAAAGCCGTCGTTGAACTAGCCAAAGCTGGGAAGACACAACAGTTTTGGATCAAGGGAGACCTTCTAATGACAAAGGGAAACAGATTATACATTCCAAGAACAGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGTCGGACACCCTAGGTGGCAACGAACATACGCCTTAATAAAAAGGGGTACTTCTGGCCAAATATGCGAGACGACATCATGTAGTACACCAAGACATGCCTCATTTGCCAACAGGACAAAGTCGAGAAAGTAA

Coding sequence (CDS)

ATGGGTACGCTTAAATTCTTGTCAGCCCTCCAACGAAAGGCCAACCCAAAGGAGATAATAAAGAAATGGCTCATGTTCGTAGATGCAATAATAAACTCCCGACCAAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGGACCCTGGAAAAATGAAAGCTGCTATTGTGGGAGTTTCTAAAAGAGCCCCCTTCAAATTAGGGACCTGGACAGGAGAAATGGACCTTGTCGTGGTCTGCATGGATGACTTCGACGTGGTACTTGGGATGGACTTCCTCCTAGAACACGAAGTTATCCCAATGCCATTGGCGAAATGCTTGGTGATTGTCGACCACAACCCCACAGTGATACCTGCAAGCATCAAGCAACCAGGTAATCTTAGAAAGATCTCGGCCATACAATTGAAAAGAGGACTCGCACAAGAGGAACCTACATTTATGGCTATACCCCTAATGGAAGAAATGACCACTGAGGGAACCGTTCCAAGCAAAATCAAGGAAGTACTAGACAGTTATGCTGACATAATACCAGAGAGCTTACCACAAACACTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTCTCCGGGGTTAAACCCCCAACAAAGAATGCATACCGAATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGATGGCAGGATTCATCCCCCCGACGAAGGAACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGAATGGGGTGTTGCGTCTTTGCATAGACTATAGAGCCTTAAACAAGGTAACGGTACGCAACAAATACCCACTGCCGATAATATCCAACTTGTTTGACCAGCTTCACGGAGCCAAATACTTCACGAAGTTGGACTACGATCAAGGTACTACCAATTGTGGACAGATCGGTATAGATAGCAATAAGAATAAAGCTATCCAAGAGTGGAAAATCCCTACTTCAGTATCCTATGTGCGATCCTTCTTAGGATTGGCAAACTACTATAGGTGGTTTGTCGAAGGGTTTTCACAAGGAGCCACCCCATTAACAGAACTCCTAAAGAAAGACCACCCATGGTCGTGGTCAAATGAATGTCAAATGGTCTTTGAAGATCTGAAGGCAACCATGACGAAGGGTCTTGTCTTCGAATTAGTAGATGTTACTAAACCATTTGAAATAGAGACGGATGCTTCCGACTTTGCCCTAGATGGTGTCCTTGTTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGGAAGCTCAATGATGCTGAAAGGAGGTACACTGTCTCCGAAAAAGAAATGTTGGATGTGGCTCATTGCCTACGAGTCTGGAGACAGTACCTCTTGGGATCACAGTTCATAGTGAAGACGGATAACAGCGCCATTTGCCATTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGATGGCAGGAGTCATTGGCTGAATTCGACTTCAAATTCGAACACAAGGCAGGAAAGAGCAACCAAGCAACTGACGTGCTGAGTCGGAAGGGCGAACATGCAGCCCTGTGCATGATAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAAGAACATTTACATAAAAACCCATCTGTCAAAGCCGTCGTTGAACTAGCCAAAGCTGGGAAGACACAACAGTTTTGGATCAAGGGAGACCTTCTAATGACAAAGGGAAACAGATTATACATTCCAAGAACAGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGTCGGACACCCTAGGTGGCAACGAACATACGCCTTAATAAAAAGGGGTACTTCTGGCCAAATATGCGAGACGACATCATGTAGTACACCAAGACATGCCTCATTTGCCAACAGGACAAAGTCGAGAAAGTAA

Protein sequence

MGTLKFLSALQRKANPKEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKDPGKMKAAIVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEHEVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMTTEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELAELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIISNLFDQLHGAKYFTKLDYDQGTTNCGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQEGHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRDIIKEHLHKNPSVKAVVELAKAGKTQQFWIKGDLLMTKGNRLYIPRTGELRKKLIQECHDTLWVGHPRWQRTYALIKRGTSGQICETTSCSTPRHASFANRTKSRK

Homology

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BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.1e-39
Identity = 142/590 (24.07%), Postives = 237/590 (40.17%), Query Frame = 0


Query: 156 LAQEEPTFMAIPLMEEMTTEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELL- 215
           ++  + T   +  +  +  E  +P   KE  D  A+   E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 216 SGVKPPTKNAYRMAPPELAELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCID 275
              + P +N Y + P ++  +  ++++ L +G I  +K     PV+F  KK G LR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 276 YRALNKVTVRNKYPLPIISNLFDQLHGAKYFTKLDY------------------------ 335
           Y+ LNK    N YPLP+I  L  ++ G+  FTKLD                         
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 532 VFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQ 591

Query: 396 -----------------------------DQGTTNCGQIGIDSNKNKAIQEWKIPTSVSY 455
                                        ++G T C       N +K +Q WK P +   
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPC-----QENIDKVLQ-WKQPKNRKE 651

Query: 456 VRSFLGLANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFEL 515
           +R FLG  NY R F+   SQ   PL  LLKKD  W W+       E++K  +    V   
Sbjct: 652 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 711

Query: 516 VDVTKPFEIETDASDFALDGVLVQEG-----HPIAYESRKLNDAERRYTVSEKEMLDVAH 575
            D +K   +ETDASD A+  VL Q+      +P+ Y S K++ A+  Y+VS+KEML +  
Sbjct: 712 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 771

Query: 576 CLRVWRQYLLGS--QFIVKTDN-SAICHFFDQPKLTAKQ-ARWQESLAEFDFKFEHKAGK 613
            L+ WR YL  +   F + TD+ + I    ++ +   K+ ARWQ  L +F+F+  ++ G 
Sbjct: 772 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 831

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BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot
Match: P0CT42 (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-7 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.1e-39
Identity = 142/590 (24.07%), Postives = 237/590 (40.17%), Query Frame = 0


Query: 156 LAQEEPTFMAIPLMEEMTTEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELL- 215
           ++  + T   +  +  +  E  +P   KE  D  A+   E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 216 SGVKPPTKNAYRMAPPELAELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCID 275
              + P +N Y + P ++  +  ++++ L +G I  +K     PV+F  KK G LR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 276 YRALNKVTVRNKYPLPIISNLFDQLHGAKYFTKLDY------------------------ 335
           Y+ LNK    N YPLP+I  L  ++ G+  FTKLD                         
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 532 VFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQ 591

Query: 396 -----------------------------DQGTTNCGQIGIDSNKNKAIQEWKIPTSVSY 455
                                        ++G T C       N +K +Q WK P +   
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPC-----QENIDKVLQ-WKQPKNRKE 651

Query: 456 VRSFLGLANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFEL 515
           +R FLG  NY R F+   SQ   PL  LLKKD  W W+       E++K  +    V   
Sbjct: 652 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 711

Query: 516 VDVTKPFEIETDASDFALDGVLVQEG-----HPIAYESRKLNDAERRYTVSEKEMLDVAH 575
            D +K   +ETDASD A+  VL Q+      +P+ Y S K++ A+  Y+VS+KEML +  
Sbjct: 712 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 771

Query: 576 CLRVWRQYLLGS--QFIVKTDN-SAICHFFDQPKLTAKQ-ARWQESLAEFDFKFEHKAGK 613
            L+ WR YL  +   F + TD+ + I    ++ +   K+ ARWQ  L +F+F+  ++ G 
Sbjct: 772 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 831

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BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot
Match: P0CT43 (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-8 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.1e-39
Identity = 142/590 (24.07%), Postives = 237/590 (40.17%), Query Frame = 0


Query: 156 LAQEEPTFMAIPLMEEMTTEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELL- 215
           ++  + T   +  +  +  E  +P   KE  D  A+   E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 216 SGVKPPTKNAYRMAPPELAELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCID 275
              + P +N Y + P ++  +  ++++ L +G I  +K     PV+F  KK G LR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 276 YRALNKVTVRNKYPLPIISNLFDQLHGAKYFTKLDY------------------------ 335
           Y+ LNK    N YPLP+I  L  ++ G+  FTKLD                         
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 532 VFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQ 591

Query: 396 -----------------------------DQGTTNCGQIGIDSNKNKAIQEWKIPTSVSY 455
                                        ++G T C       N +K +Q WK P +   
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPC-----QENIDKVLQ-WKQPKNRKE 651

Query: 456 VRSFLGLANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFEL 515
           +R FLG  NY R F+   SQ   PL  LLKKD  W W+       E++K  +    V   
Sbjct: 652 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 711

Query: 516 VDVTKPFEIETDASDFALDGVLVQEG-----HPIAYESRKLNDAERRYTVSEKEMLDVAH 575
            D +K   +ETDASD A+  VL Q+      +P+ Y S K++ A+  Y+VS+KEML +  
Sbjct: 712 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 771

Query: 576 CLRVWRQYLLGS--QFIVKTDN-SAICHFFDQPKLTAKQ-ARWQESLAEFDFKFEHKAGK 613
            L+ WR YL  +   F + TD+ + I    ++ +   K+ ARWQ  L +F+F+  ++ G 
Sbjct: 772 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 831

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.5e-38
Identity = 100/289 (34.60%), Postives = 151/289 (52.25%), Query Frame = 0


Query: 254 PYG---APVLFQKKKNGVLRLCIDYRALNKV------TVRNKYPLPIISNLFDQLHGAKY 313
           P+G   AP  FQ+  N +LR  ++   L  +      +      L  +  +F++L  A  
Sbjct: 335 PFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANL 394

Query: 314 FTKLD----YDQGTTNCGQI----GIDSNKNK--AIQEWKIPTSVSYVRSFLGLANYYRW 373
             +LD      Q TT  G +    GI  N  K  AIQ++ IPT    +++FLGL  YYR 
Sbjct: 395 KLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRK 454

Query: 374 FVEGFSQGATPLTELLKKDHPWSWSN-ECQMVFEDLKATMTKGLVFELVDVTKPFEIETD 433
           F+  F+  A P+T+ LKK+     +N E    F+ LK  +++  + ++ D TK F + TD
Sbjct: 455 FIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTD 514

Query: 434 ASDFALDGVLVQEGHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVK 493
           ASD AL  VL Q+GHP++Y SR LN+ E  Y+  EKE+L +    + +R YLLG  F + 
Sbjct: 515 ASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEIS 574

Query: 494 TDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSR 523
           +D+  +   +      +K  RW+  L+EFDF  ++  GK N   D LSR
Sbjct: 575 SDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.0e-37
Identity = 115/417 (27.58%), Postives = 167/417 (40.05%), Query Frame = 0


Query: 219 PPTKNAYRMAPPELAELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGV-----LRLCI 278
           P     Y +A     E+  Q+ E+L  G I  +  PY +P     KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 279 DYRALNKVTVRNKYPLPIISNLFDQLHGAKYFTKLDYDQG----------------TTNC 338
           DYR LN++T+ ++YP+P +  +  +L   +YFT +D  +G                +T  
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 339 GQI--------------------------------------------------------- 398
           G                                                           
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 399 --------------------------------GIDSN--KNKAIQEWKIPTSVSYVRSFL 458
                                           GI  N  K KAI  + IPT    +R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 459 GLANYYRWFVEGFSQGATPLTELLKKDHPWSWSN-ECQMVFEDLKATMTKGLVFELVDVT 518
           GL  YYR F+  ++  A P+T  LKK         E    FE LKA + +  + +L D  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 519 KPFEIETDASDFALDGVLVQEGHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYL 523
           K F + TDAS+ AL  VL Q GHPI++ SR LND E  Y+  EKE+L +    + +R YL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 5.1e-258
Identity = 458/738 (62.06%), Postives = 527/738 (71.41%), Query Frame = 0


Query: 1    MGTLKFLSALQRKAN-PKEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            M  LKFLSA+Q++ N PK   +K LMFVDA IN   +KST++DSGATHNFI++QEARRL 
Sbjct: 430  MRALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNXAKSTMVDSGATHNFISEQEARRLK 489

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            LTIEKD GKMK        IVGVSKR   KLGTWTG +D VVV MDDFDVVLGM+FL+EH
Sbjct: 490  LTIEKDTGKMKVVNFEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEH 549

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKC+++  ++PTV+  SIKQPG +R ISA+QLK+GL +EEPTFMAIP++E+  
Sbjct: 550  KVIPMPLAKCMIVTSNSPTVVTTSIKQPGGIRMISALQLKKGLNREEPTFMAIPMVEQPV 609

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
                VP +I+ V+  Y DI+P+SLP+TLPPRRGIDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 610  ETRDVPPEIQVVMKEYVDIMPDSLPKTLPPRRGIDHEIELIPGAKPPAKNAYRMAPPELA 669

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K P+GAPVLFQKKK+G LRLCIDYRALNKVTVRNKYPLPII+
Sbjct: 670  ELRKQLDELLNAGFIRPAKAPFGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIIT 729

Query: 301  NLFDQLHGAKYFTKLDY------------DQGTTNC------------------------ 360
            +LFDQLHGAKYFTKLD             D+  T C                        
Sbjct: 730  DLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMXFGLTNAPATFC 789

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 790  TMMNQVFHEYLDQFVVVYLDDIVVYSPTLKEHQIHLRLVFDKLRQNQLYVKKEKCAFAQK 849

Query: 421  -----------GQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                       GQI +D++K KAIQEW++PTSV  +RSFLGLANYYR F+EGFS+ ATP+
Sbjct: 850  RIXFLGHVIEQGQISMDTDKVKAIQEWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPM 909

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKK   W WS E Q  FEDLKA M KG V  L DVTKPFE+ETDASD+AL GVL+Q+
Sbjct: 910  TELLKKGMTWMWSKESQDAFEDLKAAMMKGPVLGLADVTKPFEVETDASDYALGGVLLQD 969

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
             HPI YESRKLN+AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSAICHFF+QP
Sbjct: 970  DHPIXYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQP 1029

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDFKFEHKAGKSNQA D LSRKGEHA LCM+AHIH+SK DGS+RD
Sbjct: 1030 KLTSKQARWQELLAEFDFKFEHKAGKSNQAADALSRKGEHAXLCMLAHIHTSKADGSIRD 1089

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 1.3e-242
Identity = 415/696 (59.63%), Postives = 513/696 (73.71%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANP-KEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLSALQ+KA   KE +++ LM+V+A +N + +KST++DSGATHNF+ + EARRL 
Sbjct: 401  MGALKFLSALQKKAEEVKEPLERGLMYVEAWVNQKAAKSTMVDSGATHNFMTETEARRLN 460

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  +KDPGKMKA       I+GV+KR   KLGTW+G +D V+V MDDFDVVLG+ FLLEH
Sbjct: 461  LXWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDVVLGIKFLLEH 520

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLV+   +P V+  SIKQP  ++ ISA+QLK+G+AQ+EPTFMAIP+ E   
Sbjct: 521  KVIPMPLAKCLVVTSSDPIVVQTSIKQPSGVKMISALQLKKGIAQDEPTFMAIPVAEGRN 580

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +E  VP +I+ VL++YAD++P++LP+ LPPR GIDHEIELL G KPP KNAYRMAPPELA
Sbjct: 581  SEELVPREIQRVLEAYADVMPDNLPKNLPPRPGIDHEIELLPGAKPPAKNAYRMAPPELA 640

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQKKK+  LRLCIDYRALNK+ VRNK PLPII+
Sbjct: 641  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDXSLRLCIDYRALNKLXVRNKXPLPIIT 700

Query: 301  NLFDQLHGAKYFTKLDYDQG---------------------------------------- 360
            +LFDQLHGAKYF+KLD   G                                        
Sbjct: 701  DLFDQLHGAKYFSKLDLRSGYYQVFHEYLDKFVVVYLDDIVVYSPTMEEHQVHLQLVFEK 760

Query: 361  -------------------------TTNCGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGL 420
                                        CG+IG++  K KAIQEWKIPTS++ +RSFLGL
Sbjct: 761  LKQNQLYVKREKCSFAQERISFLGHVIECGRIGMEDGKVKAIQEWKIPTSITELRSFLGL 820

Query: 421  ANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPF 480
            ANYYR FVEGFS+   PLT+LLKK+  W+W+ EC   FE LK  M +G V  + DVT+PF
Sbjct: 821  ANYYRRFVEGFSKRTGPLTDLLKKNQKWNWTPECHAAFESLKKAMMEGSVLGIADVTRPF 880

Query: 481  EIETDASDFALDGVLVQEGHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGS 540
            E+ETDASDFAL GVL+Q+GHPIAYES+KLNDAERRY  SEKEML V HCLR WRQYLLG+
Sbjct: 881  EVETDASDFALGGVLLQDGHPIAYESQKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA 940

Query: 541  QFIVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAA 600
            +F+VKTDNS++CHFF+QPKL++KQARWQE LAEFDF+FEHK G++NQA D LSRK E AA
Sbjct: 941  KFVVKTDNSSVCHFFNQPKLSSKQARWQEYLAEFDFQFEHKPGRANQAADALSRKSEXAA 1000

Query: 601  LCMIAHIHSSKIDGSMRDIIKEHLHKNPSVKAVVELAKAGKTQQFWIKGDLLMTKGNRLY 625
            LCM+AH+ +SK+ GS+R+ I+E+L  +P+ +A+++LA  G T+QF ++ DL  TKGN LY
Sbjct: 1001 LCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGXTRQFXVENDLXFTKGNXLY 1060

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 7.6e-238
Identity = 425/738 (57.59%), Postives = 511/738 (69.24%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEI-IKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLS+LQ+K       +++ LM+VD  IN +P+KST++DSGATHNFI + EA+RL 
Sbjct: 411  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINEKPTKSTMVDSGATHNFITEAEAKRLN 470

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  EKD G+MKA       I+G+ KR   +LG W+G +D VVV MDDFDVVLGM+FLLEH
Sbjct: 471  LRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEH 530

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLVI    P+V+   ++QP  L+ ISA+QLK+GL+++EPTFMAIPL     
Sbjct: 531  QVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSEN 590

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +  TVP +I  VL+ Y D++P+SLP++LPPRR IDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 591  SGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA 650

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQKKK+G LRLCIDYRALNK+TVRNKYPLPII+
Sbjct: 651  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIIT 710

Query: 301  NLFDQLHGAKYFTKLD----YDQ---------------------------GTTN------ 360
            +LFD+LHGAKYF+KLD    Y Q                           G TN      
Sbjct: 711  DLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFC 770

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 771  TLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQE 830

Query: 421  ----------CGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                      CG+IG++  K  AI++W +P SVS +RSFLGLANYYR FVEGFS+ A+PL
Sbjct: 831  RINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPL 890

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKKD  W+W  ECQ  F+ LK  + +G +  + DVTKPFE+ETDASD+AL GVL+Q 
Sbjct: 891  TELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQN 950

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
            GHPIAYESRKLN AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSA CHFF QP
Sbjct: 951  GHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQP 1010

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDF+FEHK G SNQA D LSRK EHAA+C++AH+  S+I GS+RD
Sbjct: 1011 KLTSKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRD 1070

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 1.3e-237
Identity = 424/738 (57.45%), Postives = 511/738 (69.24%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEI-IKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLS+LQ+K       +++ LM+VD  IN +P+KST++DSGATHNFI + EA+RL 
Sbjct: 441  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLN 500

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  EKD G+MKA       I+G+ KR   +LG W+G +D VVV MDDFDVVLGM+FLLEH
Sbjct: 501  LRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEH 560

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLVI    P+V+   ++QP  L+ ISA+QLK+GL+++EPTFMAIPL     
Sbjct: 561  QVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSEN 620

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +  TVP +I  VL+ Y D++P+SLP++LPPRR IDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 621  SGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA 680

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQ+KK+G LRLCIDYRALNK+TVRNKYPLPII+
Sbjct: 681  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIIT 740

Query: 301  NLFDQLHGAKYFTKLD----YDQ---------------------------GTTN------ 360
            +LFD+LHGAKYF+KLD    Y Q                           G TN      
Sbjct: 741  DLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFC 800

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 801  TLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQE 860

Query: 421  ----------CGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                      CG+IG++  K  AI++W +P SVS +RSFLGLANYYR FVEGFS+ A+PL
Sbjct: 861  RINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPL 920

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKKD  W+W  ECQ  F+ LK  + +G +  + DVTKPFE+ETDASD+AL GVL+Q 
Sbjct: 921  TELLKKDVHWNWDPECQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQN 980

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
            GHPIAYESRKLN AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSA CHFF QP
Sbjct: 981  GHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQP 1040

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDF+FEHK G SNQA D LSRK EHAA+C++AH+  S+I GS+RD
Sbjct: 1041 KLTSKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRD 1100

[Close]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 1.3e-237
Identity = 424/738 (57.45%), Postives = 511/738 (69.24%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEI-IKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLS+LQ+K       +++ LM+VD  IN +P+KST++DSGATHNFI + EA+RL 
Sbjct: 441  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLN 500

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  EKD G+MKA       I+G+ KR   +LG W+G +D VVV MDDFDVVLGM+FLLEH
Sbjct: 501  LRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEH 560

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLVI    P+V+   ++QP  L+ ISA+QLK+GL+++EPTFMAIPL     
Sbjct: 561  QVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSEN 620

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +  TVP +I  VL+ Y D++P+SLP++LPPRR IDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 621  SGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA 680

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQ+KK+G LRLCIDYRALNK+TVRNKYPLPII+
Sbjct: 681  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIIT 740

Query: 301  NLFDQLHGAKYFTKLD----YDQ---------------------------GTTN------ 360
            +LFD+LHGAKYF+KLD    Y Q                           G TN      
Sbjct: 741  DLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFC 800

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 801  TLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQE 860

Query: 421  ----------CGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                      CG+IG++  K  AI++W +P SVS +RSFLGLANYYR FVEGFS+ A+PL
Sbjct: 861  RINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPL 920

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKKD  W+W  ECQ  F+ LK  + +G +  + DVTKPFE+ETDASD+AL GVL+Q 
Sbjct: 921  TELLKKDVHWNWDPECQTAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQN 980

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
            GHPIAYESRKLN AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSA CHFF QP
Sbjct: 981  GHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQP 1040

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDF+FEHK G SNQA D LSRK EHAA+C++AH+  S+I GS+RD
Sbjct: 1041 KLTSKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRD 1100

[Close]

BLAST of CmoCh16G008750.1 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1057.7 bits (2734), Expect = 3.9e-305
Identity = 541/737 (73.41%), Postives = 572/737 (77.61%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLGL 60
            MG LKFLSALQRK  PKEII+K LMFVDA INSR SKSTLIDSGATHNFIADQEARRLGL
Sbjct: 437  MGALKFLSALQRKVEPKEIIEKGLMFVDATINSRLSKSTLIDSGATHNFIADQEARRLGL 496

Query: 61   TIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEHE 120
            TI KDPGKMKA       IVGVSK  PFK+G WTGE+DLVVV MDDFDVVLGM+FLLEH+
Sbjct: 497  TIGKDPGKMKAVNSEALPIVGVSKGVPFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHK 556

Query: 121  VIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMTT 180
            VIPMPLAKCLVI D NPTVIPASIKQPGNLR ISAIQLKRGLA+EEPTFMAIPL+EE TT
Sbjct: 557  VIPMPLAKCLVITDRNPTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMAIPLIEEATT 616

Query: 181  EGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELAE 240
            E TVP +IK+VLDSY DI+PESLPQTLPPRRGIDHEIELL GVKPP KNAYRMAPPELAE
Sbjct: 617  EETVPEEIKDVLDSYTDIMPESLPQTLPPRRGIDHEIELLPGVKPPAKNAYRMAPPELAE 676

Query: 241  LRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIISN 300
            LRKQLDELL AGFI P K PYGAPVLFQKKK+G LRLCIDYRALNKVTVRNKYPLPIIS+
Sbjct: 677  LRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISD 736

Query: 301  LFDQLHGAKYFTKLDYDQG----------------------------------------- 360
            LFDQLHGAKYFTKLD   G                                         
Sbjct: 737  LFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT 796

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 797  LMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTC 856

Query: 421  ------TTNCGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPLT 480
                     CGQI +DS+K KAIQEWK+PTSVS +RSFLGLANYYR FVEGFS+ A PLT
Sbjct: 857  IHFLGHVVRCGQISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLT 916

Query: 481  ELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQEG 540
            ELLKKDHPWSWSN+CQM FE+LK TMT+G V  LVDVTKPFE+ETDASDFAL GVL+QEG
Sbjct: 917  ELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEG 976

Query: 541  HPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQPK 600
            HPIAYESRKLNDAERRYTVSEKEML V HCLRVWRQYLLGSQF+VKTDNSA CHFFDQPK
Sbjct: 977  HPIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPK 1036

Query: 601  LTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRDI 625
            LTAKQARWQESLAEFDFKFEHKAGKSNQA D LSRKGEHAALCM+AHIHSSKIDGSMRDI
Sbjct: 1037 LTAKQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDI 1096

[Close]

BLAST of CmoCh16G008750.1 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1004.6 bits (2596), Expect = 3.9e-289
Identity = 519/713 (72.79%), Postives = 549/713 (77.00%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLGL 60
            MG LKFLSALQRK  PKEII+K LMFVDA INSR SKSTLIDSGATHNFIADQEARRLGL
Sbjct: 437  MGALKFLSALQRKVEPKEIIEKGLMFVDATINSRLSKSTLIDSGATHNFIADQEARRLGL 496

Query: 61   TIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEHE 120
            TI KDPGKMKA       IVGVSK  PFK+G WTGE+DLVVV MDDFDVVLGM+FLLEH+
Sbjct: 497  TIGKDPGKMKAVNSEALPIVGVSKGVPFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHK 556

Query: 121  VIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMTT 180
            VIPMPLAKCLVI D NPTVIPASIKQPGNLR ISAIQLKRGLA+EEPTFMAIPL+EE TT
Sbjct: 557  VIPMPLAKCLVITDRNPTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMAIPLIEEATT 616

Query: 181  EGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELAE 240
            E TVP +IKEVLD+Y DI+PESLPQTLPPRRGIDHEIELL GVKPP KNAYRMAPPELAE
Sbjct: 617  EETVPEEIKEVLDNYTDIMPESLPQTLPPRRGIDHEIELLPGVKPPAKNAYRMAPPELAE 676

Query: 241  LRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIISN 300
            LRKQLDELL AGFI P K PYGAPVLFQKKK+G LRLCIDYRALNKVTVRNKYPLPIIS+
Sbjct: 677  LRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISD 736

Query: 301  LFDQLHGAKYFTKLDYDQG----------------------------------------- 360
            LFDQLHGAKYFTKLD   G                                         
Sbjct: 737  LFDQLHGAKYFTKLDLRSGYYQVRIVEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFYT 796

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 797  LMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTC 856

Query: 421  ------TTNCGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPLT 480
                     CGQI +DS+K KAIQEWK+PTSVS +RSFLGLANYYR FVEGFS+ A PLT
Sbjct: 857  INFLGHVVRCGQISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLT 916

Query: 481  ELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQEG 540
            ELLKKDHPWSWSN+CQM FE+LK TMT+G V  LVDVTKPFE+ETDASDFAL GVL+QEG
Sbjct: 917  ELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEG 976

Query: 541  HPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQPK 600
            HPIAYESRKLNDAERRYTVSEKEML V HCLRVWRQYLLGSQF+VKTDNSA CHFFDQPK
Sbjct: 977  HPIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPK 1036

[Close]

BLAST of CmoCh16G008750.1 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 900.2 bits (2325), Expect = 1.0e-257
Identity = 458/738 (62.06%), Postives = 527/738 (71.41%), Query Frame = 0


Query: 1    MGTLKFLSALQRKAN-PKEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            M  LKFLSA+Q++ N PK   +K LMFVDA IN   +KST++DSGATHNFI++QEARRL 
Sbjct: 430  MRALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNXAKSTMVDSGATHNFISEQEARRLK 489

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            LTIEKD GKMK        IVGVSKR   KLGTWTG +D VVV MDDFDVVLGM+FL+EH
Sbjct: 490  LTIEKDTGKMKVVNFEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEH 549

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKC+++  ++PTV+  SIKQPG +R ISA+QLK+GL +EEPTFMAIP++E+  
Sbjct: 550  KVIPMPLAKCMIVTSNSPTVVTTSIKQPGGIRMISALQLKKGLNREEPTFMAIPMVEQPV 609

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
                VP +I+ V+  Y DI+P+SLP+TLPPRRGIDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 610  ETRDVPPEIQVVMKEYVDIMPDSLPKTLPPRRGIDHEIELIPGAKPPAKNAYRMAPPELA 669

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K P+GAPVLFQKKK+G LRLCIDYRALNKVTVRNKYPLPII+
Sbjct: 670  ELRKQLDELLNAGFIRPAKAPFGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIIT 729

Query: 301  NLFDQLHGAKYFTKLDY------------DQGTTNC------------------------ 360
            +LFDQLHGAKYFTKLD             D+  T C                        
Sbjct: 730  DLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMXFGLTNAPATFC 789

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 790  TMMNQVFHEYLDQFVVVYLDDIVVYSPTLKEHQIHLRLVFDKLRQNQLYVKKEKCAFAQK 849

Query: 421  -----------GQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                       GQI +D++K KAIQEW++PTSV  +RSFLGLANYYR F+EGFS+ ATP+
Sbjct: 850  RIXFLGHVIEQGQISMDTDKVKAIQEWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPM 909

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKK   W WS E Q  FEDLKA M KG V  L DVTKPFE+ETDASD+AL GVL+Q+
Sbjct: 910  TELLKKGMTWMWSKESQDAFEDLKAAMMKGPVLGLADVTKPFEVETDASDYALGGVLLQD 969

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
             HPI YESRKLN+AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSAICHFF+QP
Sbjct: 970  DHPIXYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQP 1029

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDFKFEHKAGKSNQA D LSRKGEHA LCM+AHIH+SK DGS+RD
Sbjct: 1030 KLTSKQARWQELLAEFDFKFEHKAGKSNQAADALSRKGEHAXLCMLAHIHTSKADGSIRD 1089

[Close]

BLAST of CmoCh16G008750.1 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 849.0 bits (2192), Expect = 2.8e-242
Identity = 415/696 (59.63%), Postives = 513/696 (73.71%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANP-KEIIKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLSALQ+KA   KE +++ LM+V+A +N + +KST++DSGATHNF+ + EARRL 
Sbjct: 401  MGALKFLSALQKKAEEVKEPLERGLMYVEAWVNQKAAKSTMVDSGATHNFMTETEARRLN 460

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  +KDPGKMKA       I+GV+KR   KLGTW+G +D V+V MDDFDVVLG+ FLLEH
Sbjct: 461  LXWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDVVLGIKFLLEH 520

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLV+   +P V+  SIKQP  ++ ISA+QLK+G+AQ+EPTFMAIP+ E   
Sbjct: 521  KVIPMPLAKCLVVTSSDPIVVQTSIKQPSGVKMISALQLKKGIAQDEPTFMAIPVAEGRN 580

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +E  VP +I+ VL++YAD++P++LP+ LPPR GIDHEIELL G KPP KNAYRMAPPELA
Sbjct: 581  SEELVPREIQRVLEAYADVMPDNLPKNLPPRPGIDHEIELLPGAKPPAKNAYRMAPPELA 640

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQKKK+  LRLCIDYRALNK+ VRNK PLPII+
Sbjct: 641  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDXSLRLCIDYRALNKLXVRNKXPLPIIT 700

Query: 301  NLFDQLHGAKYFTKLDYDQG---------------------------------------- 360
            +LFDQLHGAKYF+KLD   G                                        
Sbjct: 701  DLFDQLHGAKYFSKLDLRSGYYQVFHEYLDKFVVVYLDDIVVYSPTMEEHQVHLQLVFEK 760

Query: 361  -------------------------TTNCGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGL 420
                                        CG+IG++  K KAIQEWKIPTS++ +RSFLGL
Sbjct: 761  LKQNQLYVKREKCSFAQERISFLGHVIECGRIGMEDGKVKAIQEWKIPTSITELRSFLGL 820

Query: 421  ANYYRWFVEGFSQGATPLTELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPF 480
            ANYYR FVEGFS+   PLT+LLKK+  W+W+ EC   FE LK  M +G V  + DVT+PF
Sbjct: 821  ANYYRRFVEGFSKRTGPLTDLLKKNQKWNWTPECHAAFESLKKAMMEGSVLGIADVTRPF 880

Query: 481  EIETDASDFALDGVLVQEGHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGS 540
            E+ETDASDFAL GVL+Q+GHPIAYES+KLNDAERRY  SEKEML V HCLR WRQYLLG+
Sbjct: 881  EVETDASDFALGGVLLQDGHPIAYESQKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA 940

Query: 541  QFIVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAA 600
            +F+VKTDNS++CHFF+QPKL++KQARWQE LAEFDF+FEHK G++NQA D LSRK E AA
Sbjct: 941  KFVVKTDNSSVCHFFNQPKLSSKQARWQEYLAEFDFQFEHKPGRANQAADALSRKSEXAA 1000

Query: 601  LCMIAHIHSSKIDGSMRDIIKEHLHKNPSVKAVVELAKAGKTQQFWIKGDLLMTKGNRLY 625
            LCM+AH+ +SK+ GS+R+ I+E+L  +P+ +A+++LA  G T+QF ++ DL  TKGN LY
Sbjct: 1001 LCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGXTRQFXVENDLXFTKGNXLY 1060

[Close]

BLAST of CmoCh16G008750.1 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 833.2 bits (2151), Expect = 1.6e-237
Identity = 425/738 (57.59%), Postives = 511/738 (69.24%), Query Frame = 0


Query: 1    MGTLKFLSALQRKANPKEI-IKKWLMFVDAIINSRPSKSTLIDSGATHNFIADQEARRLG 60
            MG LKFLS+LQ+K       +++ LM+VD  IN +P+KST++DSGATHNFI + EA+RL 
Sbjct: 411  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINEKPTKSTMVDSGATHNFITEAEAKRLN 470

Query: 61   LTIEKDPGKMKAA------IVGVSKRAPFKLGTWTGEMDLVVVCMDDFDVVLGMDFLLEH 120
            L  EKD G+MKA       I+G+ KR   +LG W+G +D VVV MDDFDVVLGM+FLLEH
Sbjct: 471  LRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEH 530

Query: 121  EVIPMPLAKCLVIVDHNPTVIPASIKQPGNLRKISAIQLKRGLAQEEPTFMAIPLMEEMT 180
            +VIPMPLAKCLVI    P+V+   ++QP  L+ ISA+QLK+GL+++EPTFMAIPL     
Sbjct: 531  QVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSEN 590

Query: 181  TEGTVPSKIKEVLDSYADIIPESLPQTLPPRRGIDHEIELLSGVKPPTKNAYRMAPPELA 240
            +  TVP +I  VL+ Y D++P+SLP++LPPRR IDHEIEL+ G KPP KNAYRMAPPELA
Sbjct: 591  SGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA 650

Query: 241  ELRKQLDELLMAGFIPPTKEPYGAPVLFQKKKNGVLRLCIDYRALNKVTVRNKYPLPIIS 300
            ELRKQLDELL AGFI P K PYGAPVLFQKKK+G LRLCIDYRALNK+TVRNKYPLPII+
Sbjct: 651  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIIT 710

Query: 301  NLFDQLHGAKYFTKLD----YDQ---------------------------GTTN------ 360
            +LFD+LHGAKYF+KLD    Y Q                           G TN      
Sbjct: 711  DLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFC 770

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 771  TLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQE 830

Query: 421  ----------CGQIGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPL 480
                      CG+IG++  K  AI++W +P SVS +RSFLGLANYYR FVEGFS+ A+PL
Sbjct: 831  RINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPL 890

Query: 481  TELLKKDHPWSWSNECQMVFEDLKATMTKGLVFELVDVTKPFEIETDASDFALDGVLVQE 540
            TELLKKD  W+W  ECQ  F+ LK  + +G +  + DVTKPFE+ETDASD+AL GVL+Q 
Sbjct: 891  TELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVETDASDYALGGVLLQN 950

Query: 541  GHPIAYESRKLNDAERRYTVSEKEMLDVAHCLRVWRQYLLGSQFIVKTDNSAICHFFDQP 600
            GHPIAYESRKLN AERRYTVSEKEML V HCLR WRQYLLGS F+VKTDNSA CHFF QP
Sbjct: 951  GHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQP 1010

Query: 601  KLTAKQARWQESLAEFDFKFEHKAGKSNQATDVLSRKGEHAALCMIAHIHSSKIDGSMRD 625
            KLT+KQARWQE LAEFDF+FEHK G SNQA D LSRK EHAA+C++AH+  S+I GS+RD
Sbjct: 1011 KLTSKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRD 1070

[Close]

BLAST of CmoCh16G008750.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-09
Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 320 IGIDSNKNKAIQEWKIPTSVSYVRSFLGLANYYRWFVEGFSQGATPLTELLKKDHPWSWS 379
           +  D  K +A+  W  P + + +R FLGL  YYR FV+ + +   PLTELLKK +   W+
Sbjct: 44  VSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWT 103

Query: 380 NECQMVFEDLKATMTKGLVFELVDVTKPF 409
               + F+ LK  +T   V  L D+  PF
Sbjct: 104 EMAALAFKALKGAVTTLPVLALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of CmoCh16G008750.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	4.1e-39	24.07	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT42	4.1e-39	24.07	Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT43	4.1e-39	24.07	Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P04323	4.5e-38	34.60	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.0e-37	27.58	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of CmoCh16G008750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D906	5.1e-258	62.06	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A6J1DLQ6	1.3e-242	59.63	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5D3C9P8	7.6e-238	57.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3C4R1	1.3e-237	57.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	1.3e-237	57.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of CmoCh16G008750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537907.1	3.9e-305	73.41	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	3.9e-289	72.79	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_022150099.1	1.0e-257	62.06	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
XP_022155185.1	2.8e-242	59.63	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
TYK07954.1	1.6e-237	57.59	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh16G008750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-09	37.08	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 29..115 e-value: 8.4E-9 score: 35.3
None	No IPR available	GENE3D	1.10.340.70		coord: 558..625 e-value: 3.4E-6 score: 29.2
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 198..319 e-value: 4.5E-28 score: 99.7
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 174..310
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 325..515
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 325..515
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 174..310
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 409..523 e-value: 1.282E-50 score: 169.596
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 31..110 e-value: 1.82707E-15 score: 70.058
None	No IPR available	CDD	cd01647	RT_LTR	coord: 246..313 e-value: 2.25796E-24 score: 98.4365
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 8..134 e-value: 1.2E-17 score: 65.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 25..115
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 403..502 e-value: 1.5E-28 score: 99.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 324..414 e-value: 1.9E-23 score: 84.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 204..502

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh16G008750	CmoCh16G008750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008750.1:exon:7333	CmoCh16G008750.1:exon:7333	exon
CmoCh16G008750.1:exon:7332	CmoCh16G008750.1:exon:7332	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008750.1:cds	CmoCh16G008750.1:cds_2	CDS
CmoCh16G008750.1:cds	CmoCh16G008750.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008750.1	CmoCh16G008750.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity