CmoCh13G006630.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G006630.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr13: 6969898 .. 6971140 (-)
Sequence length1068
RNA-Seq ExpressionCmoCh13G006630.1
SyntenyCmoCh13G006630.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGTTAAACTATAAGTTTGGTTGGTTGTCCTGTATCTAGTGCCGATTCTGTATATAACTAACAGTTAATATCATTTGTTAAAAAGCACTTCATCCTGAATTTTAGCAACTTATTCAATAAACTCCACCATGATTGCTTTGTGTTTCATGTTATGAGGTTCTTCAAATGCATTCTGTAATTGGAGTCTTATTCAGCCATCCTCAATATCTCAGATCTTCGAGCTTTTATTGTTGATGCATTTCTGAGAGCCACCGCATTCAACGGTTTCACACCAGATATGTGTACTGTATTCAATGAAATCGAGCCTCTGGTGTTTCACAGGGAAGGACACAGGAATTCCTCGACATTCAAGATTTGTACATACTGTTCATATTTATTGTAGTAGCCCATGCACTAATTAAGTCCTCAAGCTGGTTACTGTATTTTATTGAAAACTAGTTCTGATAGAACTTTCCTCTACCTGCCCACCTTGACATCCTTCATGATTTATTGTATGACTATTGAATTTTGACTTCCATGTTGTTCAAGATCCAGTGAATTGAGTAATTGAAATGAGTTTCTTGGAGAGACAATATATGCATTCAGAGGTTTGTGCGAGTACTCATAGACTGAGGGCCAGGAGCTTCTGCCAAATGGTAAAAATCAATAAAAGGAATAGCACCATCCAATACCTTTTCTTTATATCATTTACCTTAAAGTGACATGATCATTCTTTTCTCCGGTCGATCAAGTACAAGTCAGGCAAGATACATCAGAGAAAGATATTGAGAAAACTTGCTATTTCTGTGTATGATTCAAAACTCAAGGGAAGCTTTGCAATAATCAAAATACAAACTGTCCTATCTTACAATTCCTCGTTGCTTATGGTTGGCAGTTGATCATATGAAGGACCCTGTTTACGAAGTACTCTTGGCAGCATGCATCGACCACCAAAGCGCTGCTGCAAAAATATGATAAGAGCTAATACAAGAACACTGCTAGGGATGATGATGTCCCAGGCAGTGGAATAGAAGTCTAGTTTGTGGTTTGCATATATGTATGATAAATCAAGGTACCAGCTGGAATGATGAGCCCTGTAAAGGTCATAAGCATGAGGCAGTAGACGAACAAATGTGGTTCCCATATAGAAGGAGAAGGCTAGAGCCCTTTCTTTAGAATCAAGCATCAAGTTGAATATGATCTGTGGGATCAGAAAACCATCCAAGACTAAACCTCCAAGTGATTTGAGAATCTCCCA

mRNA sequence

ATGGATTTGTTAAACTATAAGTTTGCCATCCTCAATATCTCAGATCTTCGAGCTTTTATTGTTGATGCATTTCTGAGAGCCACCGCATTCAACGGTTTCACACCAGATATGTGTACTGTATTCAATGAAATCGAGCCTCTGGTGTTTCACAGGGAAGGACACAGGAATTCCTCGACATTCAAGATTTGTACATACTGTTCATATTTATTGTAGTAGCCCATGCACTAATTAAGTCCTCAAGCTGGTTACTGTATTTTATTGAAAACTAGTTCTGATAGAACTTTCCTCTACCTGCCCACCTTGACATCCTTCATGATTTATTGTATGACTATTGAATTTTGACTTCCATGTTGTTCAAGATCCAGTGAATTGAGTAATTGAAATGAGTTTCTTGGAGAGACAATATATGCATTCAGAGGTTTGTGCGAGTACTCATAGACTGAGGGCCAGGAGCTTCTGCCAAATGGTAAAAATCAATAAAAGGAATAGCACCATCCAATACCTTTTCTTTATATCATTTACCTTAAAGTGACATGATCATTCTTTTCTCCGGTCGATCAAGTACAAGTCAGGCAAGATACATCAGAGAAAGATATTGAGAAAACTTGCTATTTCTGTGTATGATTCAAAACTCAAGGGAAGCTTTGCAATAATCAAAATACAAACTGTCCTATCTTACAATTCCTCGTTGCTTATGGTTGGCAGTTGATCATATGAAGGACCCTGTTTACGAAGTACTCTTGGCAGCATGCATCGACCACCAAAGCGCTGCTGCAAAAATATGATAAGAGCTAATACAAGAACACTGCTAGGGATGATGATGTCCCAGGCAGTGGAATAGAAGTCTAGTTTGTGGTTTGCATATATGTATGATAAATCAAGGTACCAGCTGGAATGATGAGCCCTGTAAAGGTCATAAGCATGAGGCAGTAGACGAACAAATGTGGTTCCCATATAGAAGGAGAAGGCTAGAGCCCTTTCTTTAGAATCAAGCATCAAGTTGAATATGATCTGTGGGATCAGAAAACCATCCAAGACTAAACCTCCAAGTGATTTGAGAATCTCCCA

Coding sequence (CDS)

ATGGATTTGTTAAACTATAAGTTTGCCATCCTCAATATCTCAGATCTTCGAGCTTTTATTGTTGATGCATTTCTGAGAGCCACCGCATTCAACGGTTTCACACCAGATATGTGTACTGTATTCAATGAAATCGAGCCTCTGGTGTTTCACAGGGAAGGACACAGGAATTCCTCGACATTCAAGATTTGTACATACTGTTCATATTTATTGTAG

Protein sequence

MDLLNYKFAILNISDLRAFIVDAFLRATAFNGFTPDMCTVFNEIEPLVFHREGHRNSSTFKICTYCSYLL
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh13G006630.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh13G006630.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh13G006630.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh13G006630.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh13G006630CmoCh13G006630gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh13G006630.1:exon:9890CmoCh13G006630.1:exon:9890exon
CmoCh13G006630.1:exon:9889CmoCh13G006630.1:exon:9889exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh13G006630.1:three_prime_utrCmoCh13G006630.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh13G006630.1:cdsCmoCh13G006630.1:cds_2CDS
CmoCh13G006630.1:cdsCmoCh13G006630.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh13G006630.1CmoCh13G006630.1-proteinpolypeptide