Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAGTAATCCACATAGGCTTCCCCCATCCAAAATCTGCATCATATAGTGGAAATTTGCACCAGCTACTGCAACAGTACACAGCATGATCCCATCCACCACTTATCAGCCTATCCATTTTCTGTTTGGCATGCAATTTGTAGAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAGTTATCGAATGTGTATAGAGAGATAATAAATATGCATTCCAAGCGTTTTTCTTTCACAAAACTAGTACTGTATCTATTTAGTGTTCGAAGATTGTTGGGAGGGAGTTCCGTTGGCTATAATTTAGGAACTTGGCTATAATTTAGGGATTGATCATGGGTTTATCAGTAAAGAATACTATGTCTTTTAGTACGAGACATTTTTGGGAAACTAAGAGTAATGTCATGAGAGTTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGGTTCCTAACATGATATTAGAGTCATACCCTTAACTTAGCTATGTTAATAAAATCTTCAAGTATAGTCAAAAGTGACTCAAGTGTCGAGCTTCAATTAAGGGGAAGTTGTTCAAGGGCTCCATAGGCCTCAGAGGAGGCTCTATAGTGTACTTTGTTTGAGGGGAGAATTGTTAGCATGGAGAGTCGTACCAATTAATGAATTTATAAGTATGAAATATTTGGACAATTCAAAAGGAAAGCTGATTTAAACCAACTTTAACTCACCTTTGACTGAAATTTTAGCAGAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA mRNA sequence ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA Coding sequence (CDS) ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA Protein sequence MASTPFPSLASINIIRFLESKSGTSPFHSSALHFFGNSLQKSSKLLFMSPTIFHTSISLPSSSLVDDAMKYVTMFPINLSSNRGSIRPRMFTTCSRVDVVGQWPFLSKKLAQKKGSFVDEGSDHLNTTWIFHFLRNHSFKSFNLRALKHQSLQTNLFTFIPRWVTAGIQFRPEKTSRIEQRTDFRQHTTAGATSNRSPIIHKLSQ
Homology
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 185..205 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 184..205 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmoCh01G003390.1:exon:2271 | CmoCh01G003390.1:exon:2271 | exon |
CmoCh01G003390.1:exon:2272 | CmoCh01G003390.1:exon:2272 | exon |
CmoCh01G003390.1:exon:2273 | CmoCh01G003390.1:exon:2273 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmoCh01G003390.1:cds | CmoCh01G003390.1:cds_3 | CDS |
CmoCh01G003390.1:cds | CmoCh01G003390.1:cds_2 | CDS |
CmoCh01G003390.1:cds | CmoCh01G003390.1:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmoCh01G003390.1 | CmoCh01G003390.1-protein | polypeptide |
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