CmoCh01G003390 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G003390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 1615399 .. 1616713 (-)
RNA-Seq ExpressionCmoCh01G003390
SyntenyCmoCh01G003390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAGTAATCCACATAGGCTTCCCCCATCCAAAATCTGCATCATATAGTGGAAATTTGCACCAGCTACTGCAACAGTACACAGCATGATCCCATCCACCACTTATCAGCCTATCCATTTTCTGTTTGGCATGCAATTTGTAGAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAGTTATCGAATGTGTATAGAGAGATAATAAATATGCATTCCAAGCGTTTTTCTTTCACAAAACTAGTACTGTATCTATTTAGTGTTCGAAGATTGTTGGGAGGGAGTTCCGTTGGCTATAATTTAGGAACTTGGCTATAATTTAGGGATTGATCATGGGTTTATCAGTAAAGAATACTATGTCTTTTAGTACGAGACATTTTTGGGAAACTAAGAGTAATGTCATGAGAGTTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGGTTCCTAACATGATATTAGAGTCATACCCTTAACTTAGCTATGTTAATAAAATCTTCAAGTATAGTCAAAAGTGACTCAAGTGTCGAGCTTCAATTAAGGGGAAGTTGTTCAAGGGCTCCATAGGCCTCAGAGGAGGCTCTATAGTGTACTTTGTTTGAGGGGAGAATTGTTAGCATGGAGAGTCGTACCAATTAATGAATTTATAAGTATGAAATATTTGGACAATTCAAAAGGAAAGCTGATTTAAACCAACTTTAACTCACCTTTGACTGAAATTTTAGCAGAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA

mRNA sequence

ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA

Coding sequence (CDS)

ATGGCTTCAACTCCCTTCCCATCTCTTGCATCCATCAACATAATCAGATTTTTGGAGTCAAAATCTGGAACAAGCCCATTCCATTCTTCCGCCCTGCACTTCTTTGGGAACTCCCTGCAGAAGTCTTCAAAGCTTCTCTTCATGTCTCCCACTATCTTCCATACCTCCATTTCCCTCCCCTCCTCCTCCTTGGTTGATGATGCAATGAAGTATGTGACTATGTTCCCTATTAATCTCTCTTCCAATCGTGGCTCCATTCGCCCTCGGATGTTCACCACCTGTAGTAGAGTCGACGTCGTTGGCCAATGGCCTTTTTTGTCCAAGAAATTAGCACAAAAAAAGGGCAGCTTTGTAGATGAAGGCAGTGATCACCTGAACACGACTTGGATTTTCCACTTTCTCAGAAACCATAGCTTTAAGAGCTTCAATCTTCGAGCTCTCAAACACCAATCTCTTCAAACAAACCTTTTTACCTTCATCCCCAGATGGGTAACTGCCGGCATCCAATTCCGGCCGGAAAAAACTAGCCGCATTGAGCAGAGGACTGACTTCCGGCAGCATACCACCGCCGGAGCTACGAGCAATAGAAGCCCAATCATTCACAAACTGAGCCAATGA

Protein sequence

MASTPFPSLASINIIRFLESKSGTSPFHSSALHFFGNSLQKSSKLLFMSPTIFHTSISLPSSSLVDDAMKYVTMFPINLSSNRGSIRPRMFTTCSRVDVVGQWPFLSKKLAQKKGSFVDEGSDHLNTTWIFHFLRNHSFKSFNLRALKHQSLQTNLFTFIPRWVTAGIQFRPEKTSRIEQRTDFRQHTTAGATSNRSPIIHKLSQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G003390.1CmoCh01G003390.1mRNA