Cmc11g0294881.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0294881.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 11861633 .. 11862860 (-)
Sequence length	419
RNA-Seq Expression	Cmc11g0294881.1
Synteny	Cmc11g0294881.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAATAGATTTGGAATATCGTTTATCACGGCTTGTTGAACCAAGAAAACGAAATTCTTCTCCTCCATTTTGTTCTCCAATCGCTTCGTTGTCCTGTTCACCATCGACACTTTTCCTCTTTTGTCGTCCACTATCGCCCCGTCATCCACCGTTGTGCCACTGCTTTCGTCGCCTACTACTATATATGTTGGTTTAAAATTTATGGTAAAATCTCTCTTTTTTCTACTCAATTCTTCTTTTCTTTTTTTTTTTTTTTTTTTTCCTTTTACACTATACCAACGTGAGATAAAATCGTTTGAAGGAGATCGTTGAAGAAGATTTGATATTGGGTTGGTTTGTTATTGTTAAATAAGTTTAATTTTATGAAATTGTTCAATTTGTTTGATTAAATTGGAGACAATCATAAAAGTATGTGGCCCTAAATAATATCTCAAATTTGCCATACTTAATTAAAGTAGTTGAAATGTTTTGAGTAGTGCACAAGTCTTCAATGGAGTCCTTTATGACCAACTTTACATAACCCACTTCTTAATTTGAGATAATATTGATGAAATGAATTTGAAAAACACAAATAGAGATTTATTTATTTCTTTAGACTATTTTTGTGATTGTGATGTTTTTTTTTTTTTTTTTTTTTGTTGGATAAGCCACTTCTAAACATTATTGGGATTTTATCCACTTTTTGGTTTGGTATTTGTTATAGTTCAAGCCATTCTTCTCTTGTTATTGTTATTTATTTAATTTTCTGGAAATTTCTTAAAAGATTTGTGGGCCCATTGCTGTTATATTTGTTCAGTATTATTCTCGTAAAAGTTGACGTGGCAAAAAGCAATATATGTGAAGAATATTCTGGATTAAAACCATATTATTTGAAGTTATTACGAAAAAGATATTCCTTCAATTAGAAGATATGATTTGATATTATTTGAAGGAGAAGTTTTTGGCATCATCTAAGAATCATCTTGCCATTCATTCACCTAATCTCTATTGACAAAGGATTGTTGGTTTCCTAGTATCTTGGCGTATGCGCGTAGAACTGAAGACGGACGAAAAGACTTCTATGAAGCAAAAAGCCAAGTGCATAAGTATTTTAGACGTGTGGAAATTTATTGTTGTTTAGTTTTAGTGAAGAAAGGTTCTGATGGCCTAATTACGAAGATCAAGTTTTTGTTGCATGAAGAAATAAAAAACCATAATCACGTTATAATAATGCAAATGATTCAGGG

mRNA sequence

ATGCTAATAGATTTGGAATATCGTTTATCACGGCTTGTTGAACCAAGAAAACGAAATTCTTCTCCTCCATTTTGTTCTCCAATCGCTTCGTTGTCCTGTTCACCATCGACACTTTTCCTCTTTTGTCGTCCACTATCGCCCCGTCATCCACCGTTGTGCCACTGCTTTCGTCGCCTACTACTATATATGTTGGTTTAAAATTTATGTATCTTGGCGTATGCGCGTAGAACTGAAGACGGACGAAAAGACTTCTATGAAGCAAAAAGCCAAGTGCATAAGTATTTTAGACGTGTGGAAATTTATTGTTGTTTAGTTTTAGTGAAGAAAGGTTCTGATGGCCTAATTACGAAGATCAAGTTTTTGTTGCATGAAGAAATAAAAAACCATAATCACGTTATAATAATGCAAATGATTCAGGG

Coding sequence (CDS)

ATGCTAATAGATTTGGAATATCGTTTATCACGGCTTGTTGAACCAAGAAAACGAAATTCTTCTCCTCCATTTTGTTCTCCAATCGCTTCGTTGTCCTGTTCACCATCGACACTTTTCCTCTTTTGTCGTCCACTATCGCCCCGTCATCCACCGTTGTGCCACTGCTTTCGTCGCCTACTACTATATATGTTGGTTTAA

Protein sequence

MLIDLEYRLSRLVEPRKRNSSPPFCSPIASLSCSPSTLFLFCRPLSPRHPPLCHCFRRLLLYMLV

Homology

The following BLAST results are available for this feature:

BLAST of Cmc11g0294881.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0294881.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0294881.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0294881.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0294881	Cmc11g0294881	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0294881.1-exon	Cmc11g0294881.1-exon-CMiso1.1chr11:11861633..11861845	exon
Cmc11g0294881.1-exon	Cmc11g0294881.1-exon-CMiso1.1chr11:11862655..11862860	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0294881.1-three_prime_utr	Cmc11g0294881.1-three_prime_utr-CMiso1.1chr11:11861633..11861845	three_prime_UTR
Cmc11g0294881.1-three_prime_utr	Cmc11g0294881.1-three_prime_utr-CMiso1.1chr11:11862655..11862662	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0294881.1-cds	Cmc11g0294881.1-cds-CMiso1.1chr11:11862663..11862860	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0294881.1	Cmc11g0294881.1-protein	polypeptide