Cmc10g0265581.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc10g0265581.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 1893931 .. 1898047 (+)
Sequence length605
RNA-Seq ExpressionCmc10g0265581.1
SyntenyCmc10g0265581.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGGAGAACTGCTCTCAGCTCTCATCATTTCCTTCACTCAACTTTTGAACTAAAACGACGTCAAAGGATTGCAAAACCCTGTAAGTAGCACATTCTCTATTTCATTTGTTCTCAATTCTTCTGTTTTTGAATAGCATTCTTTTGTAACATATATGATGAAGAGTACAATCGGTTTGAAGTTTACATTCGTGCAATGTTTCAATCTAGATAATGTTTCGTGAGCGCATTAGTTTCTTAAGCTTCGACTTCATAGATTAATTTTTTAGTAAGGTATGTTGAGAAAATATGCTTATTCTACCAAATGCTTGATGTTTTGTCAGCGTGAGTATACGGAACATATTTTAGACATAGGGAAACCATTATTAGTTTAGCATTATTGGACTTCTTTTAACTGATGTTTGGATTTTCTAACCTGACTTTGTAACTAGAAAATTATTAAGCAGATTAGAATGATAGAAAAAAAATCTTCATTCTATTAACTAGCTTCTCAGTAATTTATTTATGACTATATAAATGAAACAATAGGGACAACTTTTGAATATTGGTCGCTAAATTTAATTATACTCTCTAAGTGTTTAGGTGGAATGTATGTTTAACAAAGTAGGTCTACAATTAATCAATTAAGGGTGCGTTTAGGTTGACTTTTTTTTTTTTATTTTACATATTTTTAAATAGTTCGCCACTTTTACTGTTTAGGCAGTTTTAGGATTTTGGGGCCGTTCTTGGATCACTCCAAGTTAGTTGGTGTTCAAATGGAAGAGAGAAATAAGAGAATTTTGATGGAGGCTTGAAAGTTAGGTCATGTTTGACATTTACCTACTAGATGTCCGCTTGGAAAGTTCATTAGGTTTGTGCCAAATTCCAAGCTTTTTGTAGGTACCTTATCTAGGAAGGGTTCTTACCCTTTTATAGCCTTCTAGGGTTCTTTGATAATTTCCTCTTAATTCTTAATATTTTTCTTATAAAAAATTCCCTTCCCAAAATGGCCAAATCAATTAATTGTTTCTTATAAAAGTAAGTGGGACACCAAGATAAGCTTTTTAAACACTCAAAACCTATATTAACTTTTACTACTGTCGTGTCTGCCTTTGTAAACTGAAGCTCATAGATCAGAGAGAAAGGATTAGGAGAAAGCTCGCGCGAAAGAATACAGACCTTTTGGCATCGTTTTCCAAAAGCTTAGAACCTACTATTATGTAACCCATCTGAATCAATATTAATTTTATCGTTAAAGATTCTGTTGCTCAAGTTGTATTTGTTTGTCATGGCTGTTATAGCCGTTTCTTTTATCCATTTATAAGCGCTTTAAATTACTCTGATGCATGAGGAAAAACTCACTATCTCTTTCACTTTTGTGAAGGTTTCTCACTTACTAATTCTTTCTCTCTAATCTAGATGAAATGATTTTTTAAAAAATTTAATTTGTCCCAATACGAAGCAGAAAAAAGCAGAGTAACAAAGTTATAACTTGCGCTAAGTTTGGAAAACCTACTCATTATAAGTGACTCTGAAAGGAAATTGGTAAAGAATTAGATCTCTCATTACTTAAAAATGCAGCAGTTTTTGGAATACCATTATTAGTTAGGCGCTTGATTTGGCACCAATGAATTCCTATTTTGTGACTGGGAAGAGCACTTACTTAGTGGTTAGTCCATCTTGATTTCTTGAGTTTAGGTTCGGCTTTAATCGTACACTACATACTAATAAATATTTTCTTTGCATAATGGGTATGCTTTGGGGCTAGAACTCCATGACCCAGGAATCCATTGGGTGGATCTTTGTAGATCTAGGTTCTGGTATTGATAAGAAGGTAAAAGTTATAATCTTTCTTCATTACAAATAAATAACCATGCTTCAGTTGGAGCTAAAGTTCCTTAATAAGATAATCAACCCTTAATGAACTTACATTTTGCCCAAGCAAAAGTTTTTCAATTGGCATTTTGTTGTTTGATTTCTTGTGTTGTACTAGGAAGGCCCCCCACTGTGTTTCATATGTGACTCTGCCTTTGCTAGAGAGGTGGATGGCCTGGACAGTATCACGTGATTAGAAGAGTGATATTAAAGGATAAATGTTCCCTCTTTTTGTCCTCCATTCCTGTGTGTATATGTACAAGTTAGTCCTTTCATCTTCCTCAAACTACTATAATCAGCTCTAGCCATGGTTTAGAAATAACGCTCAAACTTGTAGAAAGTTGATGATTTTATATCAAGTAGTAATAAAGGCATATTCCCTGTTGATATTTTTGGGGAGTGAAGATAAATTCTTCCATGTGGCAACCTCCAAGTAAAATAAAGCTCCGTTCGGTTTAGCGGGCCGAAGTGCTAATTTTATCAATTACGTGCAAAGAAATGTATCTACAAAATCATTCCGATTCAAACTTCCAATATTTCCTTTTTGAGTTTCACCATCAATTAGTAATTTCTGCCTTTAAAATGGGTATAACATCAGTTTCACTTATTCGTATCTGATACAGGGCACCCAGGTATAGACATGAAAAGGTGAACAGAACCTATTTTACGTAAGATTCTGAATCTCTGATGTTGCTATTCGTAATGTAATTGATTCTTCCTTAATTCTCCTCGCTAGTGAATCACTACTTATGGAATGCTACAATGTGCATATCTTTTGGCAGATCCTTCTCTCCTTGAAAAAAAAAAAATCATGTCTGGTCCAGTACTTCATTTTACTTTATCCTGGTGACGATTGCCAAGCTAACAATTCTGGAAAATTAAAACCTCCTCGAGAATTTAGAATCTTTTGGGTGCACAGTCATTGAATACAAACTTCAACCAATTCGTGAAAGTTCAATTTTCGTATAGAAATCTTCTTTCAGGATGACTTATCTGGTTGTAGAAGCTTGAGTAATTGTAGGTATATATACAATTAATTACGCATATCTAATTTACCCAGTACCATGGAGGGATTTACGCACAGAACATCTCAAGTAAAACACGCCTAAAGGTGTTTTTACTGATGGGGGCTTAGTTCATGGTTTGAAATTGCAGTTTTGCAGCCATGCTTCTGAAAATTTACTATTACACGTACTTCACCAAAGGTTACAGTAGCAAATTTATCTTCTAACGCAAGTTGTACAAATCCAGGGGTCAGAATGTGGCAACCTATGCTTAAAATCCACCCCATCACCTTCACTTACTGGGTACATTAATGATTTGTATCTCTGTTGTTGCTTTAATTGAATTTGTAGGCACTGTTTCTCTAAGTATATATTATGGAGTATGATCAGGTAAATTGATGGTGTTCCCAAGAGCTTTTGAAGTGGTAATTAAGCCAGATTTAGAAGACTATGTATATAATATCAATGAAATCTATCATTTACATTACAAATATAATATAACTAACAGTAGACTGTCATATATTAGCTTTGTTGGTAGGGATTGGAGGGAATAGGTTGACTAAAGTTTAAGCAAAGAACATTTCAGGCAGTTTGTCACTTTTTGGAGTCAGAGGCAGCTGTAGTTTTTTTGGTTCAATATAAAAGAAAACTAAGCTTGTAGTGTTGTGTATATGTAATTTGATGTGAATAGGTAAAGAAGAAAAGAATGTAATTGGAATTTTAGAAGCTGTCAAGTCTGAAGAAGTTGAAATCCAATATTGACCAAGTCATTTGCTTTTTTGTTTTCCCCCCCCCCCCCCCCCCCCCTTTTATTTAACATTTGCCTTTTCTCTTGCAGAATAAGAAGAAGGAGAAGAAGAAGAGTAAAGAGGCCCCAAAGGGCCAAAAGGAAAAAGGCAAAGGTAATAAAAAGACACCCAAAGAGGATTAAAGGTCATAGGACAGAAGAAGAGTACAAAGTCCAAATAAGAAGCAAAAGTTGCTCAACTTTAATGCCTGCATGGGGCTCAAAATTCAAGATAGCCTTATTTTATTTTCTGAAATTGATAAATGGGTCCCTTTTTTTTTTTTTCTTTTCCCTTTCGGATGCTCTGTTCTTTGTGTGGGACATATCCCCTTCATCACTCTTTATTCATTCTCACGAGTCATTGCCTACCCTCCCCTTCTCTGCCATCCACACTACAAATGTTTTCATTTTCAATCCACCCTCTGCCCATTTCTTTTCTCAGTTACGAGTCCATGTCTTTACGTTACCCAATAA

mRNA sequence

GATGGAGAACTGCTCTCAGCTCTCATCATTTCCTTCACTCAACTTTTGAACTAAAACGACGTCAAAGGATTGCAAAACCCTGGCACCCAGGTATAGACATGAAAAGGTGAACAGAACCTATTTTACGGGTCAGAATGTGGCAACCTATGCTTAAAATCCACCCCATCACCTTCACTTACTGGAATAAGAAGAAGGAGAAGAAGAAGAGTAAAGAGGCCCCAAAGGGCCAAAAGGAAAAAGGCAAAGGTAATAAAAAGACACCCAAAGAGGATTAAAGGTCATAGGACAGAAGAAGAGTACAAAGTCCAAATAAGAAGCAAAAGTTGCTCAACTTTAATGCCTGCATGGGGCTCAAAATTCAAGATAGCCTTATTTTATTTTCTGAAATTGATAAATGGGTCCCTTTTTTTTTTTTTCTTTTCCCTTTCGGATGCTCTGTTCTTTGTGTGGGACATATCCCCTTCATCACTCTTTATTCATTCTCACGAGTCATTGCCTACCCTCCCCTTCTCTGCCATCCACACTACAAATGTTTTCATTTTCAATCCACCCTCTGCCCATTTCTTTTCTCAGTTACGAGTCCATGTCTTTACGTTACCCAATAA

Coding sequence (CDS)

ATGGGGCTCAAAATTCAAGATAGCCTTATTTTATTTTCTGAAATTGATAAATGGGTCCCTTTTTTTTTTTTTCTTTTCCCTTTCGGATGCTCTGTTCTTTGTGTGGGACATATCCCCTTCATCACTCTTTATTCATTCTCACGAGTCATTGCCTACCCTCCCCTTCTCTGCCATCCACACTACAAATGTTTTCATTTTCAATCCACCCTCTGCCCATTTCTTTTCTCAGTTACGAGTCCATGTCTTTACGTTACCCAATAA

Protein sequence

MGLKIQDSLILFSEIDKWVPFFFFLFPFGCSVLCVGHIPFITLYSFSRVIAYPPLLCHPHYKCFHFQSTLCPFLFSVTSPCLYVTQ
Homology
The following BLAST results are available for this feature:
BLAST of Cmc10g0265581.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0265581.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0265581.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0265581.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc10g0265581Cmc10g0265581gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0265581.1-exonCmc10g0265581.1-exon-CMiso1.1chr10:1893931..1894011exon
Cmc10g0265581.1-exonCmc10g0265581.1-exon-CMiso1.1chr10:1896406..1896450exon
Cmc10g0265581.1-exonCmc10g0265581.1-exon-CMiso1.1chr10:1897034..1897089exon
Cmc10g0265581.1-exonCmc10g0265581.1-exon-CMiso1.1chr10:1897625..1898047exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0265581.1-five_prime_utrCmc10g0265581.1-five_prime_utr-CMiso1.1chr10:1893931..1894011five_prime_UTR
Cmc10g0265581.1-five_prime_utrCmc10g0265581.1-five_prime_utr-CMiso1.1chr10:1896406..1896450five_prime_UTR
Cmc10g0265581.1-five_prime_utrCmc10g0265581.1-five_prime_utr-CMiso1.1chr10:1897034..1897089five_prime_UTR
Cmc10g0265581.1-five_prime_utrCmc10g0265581.1-five_prime_utr-CMiso1.1chr10:1897625..1897786five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0265581.1-cdsCmc10g0265581.1-cds-CMiso1.1chr10:1897787..1898047CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc10g0265581.1Cmc10g0265581.1-proteinpolypeptide