Cmc07g0189421.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189421.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 8160667 .. 8161338 (+)
Sequence length	672
RNA-Seq Expression	Cmc07g0189421.1
Synteny	Cmc07g0189421.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATGATGGGAATGAATCTCTACTGTCCAACAGTGACCGTTTGAAAGAAAGAAGAATAGGGTTTTCTTTCATAGAGTGGCGAGGCGATGAGAGGGAGAGGAGGGTGACAGACAGACAAAGAGAGATTTTTGTATTAGTGGTCAGGGTATACTTTACTTGGGTGTTCATTGGGTTGTCTTCTCAGGCTCCCATCACCGTACGTCATTATAACATAGATAGCTCCTTTAGCTTCTTCTCCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTTCCGTCCTCTGTTCTTCTGCCACCAAATTCCGAGGGCGGCGGAGCATTGGGCAGTGGGCTTTTCATTTTATTATTATTATTCTCACCTTTTCTCCTTCTTTCATCTGTTATGTTCATTTCTTCTATACTTCTTCTCTCCTCTCTTTTTCTTTTTTCTAATTTGAAACCATTTTTACTCGAACTATCTCATTTTCAATTTAATTACTTAGCTTTACCTATCAATCCAAAATGTATATTAACCATCCATCCATCCATCCATCCTCTTTCTTTTCTAAACTTTGTTCGTCTCTTCTTCTTTCATGACACAACGCTTCCTTACTTTTGGCTATTAAATTGTGTTACGCCACACAATTACATATATTTCAGTGTATCATTTTGATTACCCTCTCCACTTTTAATGCTT

mRNA sequence

TTTGATGATGGGAATGAATCTCTACTGTCCAACAGTGACCGTTTGAAAGAAAGAAGAATAGGGTTTTCTTTCATAGAGTGGCGAGGCGATGAGAGGGAGAGGAGGGTGACAGACAGACAAAGAGAGATTTTTGTATTAGTGGTCAGGGTATACTTTACTTGGGTGTTCATTGGGTTGTCTTCTCAGGCTCCCATCACCGTACGTCATTATAACATAGATAGCTCCTTTAGCTTCTTCTCCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTTCCGTCCTCTGTTCTTCTGCCACCAAATTCCGAGGGCGGCGGAGCATTGGGCAGTGGGCTTTTCATTTTATTATTATTATTCTCACCTTTTCTCCTTCTTTCATCTGTTATGTTCATTTCTTCTATACTTCTTCTCTCCTCTCTTTTTCTTTTTTCTAATTTGAAACCATTTTTACTCGAACTATCTCATTTTCAATTTAATTACTTAGCTTTACCTATCAATCCAAAATGTATATTAACCATCCATCCATCCATCCATCCTCTTTCTTTTCTAAACTTTGTTCGTCTCTTCTTCTTTCATGACACAACGCTTCCTTACTTTTGGCTATTAAATTGTGTTACGCCACACAATTACATATATTTCAGTGTATCATTTTGATTACCCTCTCCACTTTTAATGCTT

Coding sequence (CDS)

ATGTTCATTTCTTCTATACTTCTTCTCTCCTCTCTTTTTCTTTTTTCTAATTTGAAACCATTTTTACTCGAACTATCTCATTTTCAATTTAATTACTTAGCTTTACCTATCAATCCAAAATGTATATTAACCATCCATCCATCCATCCATCCTCTTTCTTTTCTAAACTTTGTTCGTCTCTTCTTCTTTCATGACACAACGCTTCCTTACTTTTGGCTATTAAATTGTGTTACGCCACACAATTACATATATTTCAGTGTATCATTTTGA

Protein sequence

MFISSILLLSSLFLFSNLKPFLLELSHFQFNYLALPINPKCILTIHPSIHPLSFLNFVRLFFFHDTTLPYFWLLNCVTPHNYIYFSVSF

Homology

The following BLAST results are available for this feature:

BLAST of Cmc07g0189421.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0189421.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0189421.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0189421.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0189421	Cmc07g0189421	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0189421.1-exon	Cmc07g0189421.1-exon-CMiso1.1chr07:8160667..8161338	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0189421.1-five_prime_utr	Cmc07g0189421.1-five_prime_utr-CMiso1.1chr07:8160667..8161044	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0189421.1-cds	Cmc07g0189421.1-cds-CMiso1.1chr07:8161045..8161314	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0189421.1-three_prime_utr	Cmc07g0189421.1-three_prime_utr-CMiso1.1chr07:8161315..8161338	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0189421.1	Cmc07g0189421.1-protein	polypeptide