Cmc06g0167391.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc06g0167391.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Location	CMiso1.1chr06: 20555381 .. 20555623 (+)
Sequence length	243
RNA-Seq Expression	Cmc06g0167391.1
Synteny	Cmc06g0167391.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGCATGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGATCTTATATCAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTTTGCTTTTTCGTTAGGACTAGTTCTTGTTTCTATATCCTTATTCTATATTCTGGCAAACATCCAGTTTGTAGCTGTTATGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTCAATCATATTTGTTATGATATCATGA

mRNA sequence

ATGGATTTGCATGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGATCTTATATCAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTTTGCTTTTTCGTTAGGACTAGTTCTTGTTTCTATATCCTTATTCTATATTCTGGCAAACATCCAGTTTGTAGCTGTTATGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTCAATCATATTTGTTATGATATCATGA

Coding sequence (CDS)

ATGGATTTGCATGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGATCTTATATCAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTTTGCTTTTTCGTTAGGACTAGTTCTTGTTTCTATATCCTTATTCTATATTCTGGCAAACATCCAGTTTGTAGCTGTTATGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTCAATCATATTTGTTATGATATCATGA

Protein sequence

MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAVMQLLIYVGAINVSIIFVMIS

Homology

[Close]

BLAST of Cmc06g0167391.1 vs. NCBI nr
Match: YP_009560888.1 (NdhG [Trichosanthes kirilowii] >YP_009752464.1 NADH dehydrogenase subunit G [Trichosanthes tricuspidata] >YP_009753757.1 NADH dehydrogenase subunit G [Trichosanthes nervifolia] >QAB33239.1 NdhG [Trichosanthes kirilowii] >QIT04860.1 NADH dehydrogenase subunit G [Trichosanthes tricuspidata] >QIT05368.1 NADH dehydrogenase subunit G [Trichosanthes nervifolia])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. NCBI nr
Match: YP_009447504.1 (NADH dehydrogenase subunit 6 [Cucurbita maxima] >YP_009447589.1 NADH dehydrogenase subunit 6 [Cucurbita moschata] >YP_009505133.1 NADH dehydrogenase subunit 6 [Cucurbita pepo] >ALO21764.1 NdhG [Cucurbita argyrosperma] >ALO21805.1 NdhG [Cucurbita argyrosperma var. palmeri] >ALO21874.1 NdhG [Cucurbita argyrosperma subsp. sororia] >ALO22026.1 NdhG [Cucurbita ecuadorensis] >ALO22142.1 NdhG [Cucurbita ficifolia] >ALO22239.1 NdhG [Cucurbita lundelliana] >ALO22287.1 NdhG [Cucurbita maxima subsp. andreana] >ALO22418.1 NdhG [Cucurbita okeechobeensis] >ALO22489.1 NdhG [Cucurbita okeechobeensis subsp. martinezii] >ALO22598.1 NdhG [Cucurbita pepo subsp. fraterna] >ALO22623.1 NdhG [Cucurbita pepo subsp. ovifera] >ALO22729.1 NdhG [Cucurbita pepo var. ozarkana] >ALO22777.1 NdhG [Cucurbita pepo subsp. pepo] >ALO22836.1 NdhG [Cucurbita pepo var. texana])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. NCBI nr
Match: YP_009317439.1 (NADH dehydrogenase subunit 6 [Coccinia grandis] >AOX48754.1 NADH dehydrogenase subunit 6 [Coccinia grandis] >AOX48839.1 NADH dehydrogenase subunit 6 [Coccinia grandis])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. NCBI nr
Match: YP_009525238.1 (NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >YP_009751704.1 NADH dehydrogenase subunit G [Hodgsonia heteroclita] >YP_009752209.1 NADH dehydrogenase subunit G [Linnaeosicyos amara] >YP_009752216.1 NADH dehydrogenase subunit G [Linnaeosicyos amara] >YP_009752295.1 NADH dehydrogenase subunit G [Trichosanthes baviensis] >YP_009753840.1 NADH dehydrogenase subunit G [Trichosanthes pilosa] >AXR94524.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >AXR94610.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >AXR94694.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >AXR94779.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >QIT04269.1 NADH dehydrogenase subunit G [Trichosanthes baviensis])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. NCBI nr
Match: YP_004841838.1 (NADH-plastoquinone oxidoreductase subunit 6 [Cucumis melo subsp. melo] >YP_009860128.1 NADH-plastoquinone oxidoreductase subunit 6 [Cucumis melo subsp. agrestis] >ASY96657.1 NADH dehydrogenase subunit 6 [Cucumis melo var. conomon] >ASY96744.1 NADH dehydrogenase subunit 6 [Cucumis melo var. makuwa] >ASY96831.1 NADH dehydrogenase subunit 6 [Cucumis melo var. momordica] >ASY96918.1 NADH dehydrogenase subunit 6 [Cucumis melo var. dudaim] >ASY97005.1 NADH dehydrogenase subunit 6 [Cucumis melo var. cantalupo] >ASY97179.1 NADH dehydrogenase subunit 6 [Cucumis melo var. inodorus] >ASY97353.1 NADH dehydrogenase subunit 6 [Cucumis melo var. flexuosus] >QJF46439.1 NADH dehydrogenase subunit 6 [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot
Match: Q2QD38 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-24
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot
Match: Q9M3I8 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Spinacia oleracea OX=3562 GN=ndhG PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.9e-20
Identity = 58/76 (76.32%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFL+V LGS LI G++GV+LF N I+ AFSLGLVLV ISLFYILAN  FVA 
Sbjct: 1  MDLPGPIHDFLLVFLGSGLILGALGVVLFTNPIFSAFSLGLVLVCISLFYILANSHFVAS 60

Query: 61 MQLLIYVGAINVSIIF 77
           QLLIYVGAINV IIF
Sbjct: 61 AQLLIYVGAINVLIIF 76

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot
Match: A7Y3L7 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ipomoea purpurea OX=4121 GN=ndhG PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-19
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFL+V LGS LI GS+GV+LF N IY AFSLGLVLV ISLFYIL+N  FVA 
Sbjct: 1  MDLPGPIHDFLLVFLGSGLILGSIGVVLFPNPIYSAFSLGLVLVCISLFYILSNSYFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV I+F ++
Sbjct: 61 AQLLIYVGAINVLILFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot
Match: Q09MC3 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Citrus sinensis OX=2711 GN=ndhG PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-19
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDF++V LGS LI G +GV+LF N IY AFSLGLVLV ISLFYIL+N  FVA 
Sbjct: 1  MDLPGPIHDFILVFLGSGLILGGLGVVLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGA+NV IIF ++
Sbjct: 61 AQLLIYVGAVNVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot
Match: B2XWJ4 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale OX=180217 GN=ndhG PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-19
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFL+V  GS LI G +GV+LF N I+ AFSLGLVLV ISLFYI+AN QFVA 
Sbjct: 1  MDLPGPIHDFLLVFFGSGLILGGLGVILFTNPIFSAFSLGLVLVCISLFYIIANSQFVAS 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL
Match: A0A218KG81 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL
Match: A0A6H0ET31 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL
Match: A0A1X9Q1H7 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL
Match: A0A249RZE0 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL
Match: A0A1S4EU65 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo OX=3656 GN=ndhG PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFLVVLLGS LI GSMGVLLFNNSIY AFSLGLVLVSISLFYILAN QFVA 
Sbjct: 1  MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

[Close]

BLAST of Cmc06g0167391.1 vs. TAIR 10
Match: ATCG01080.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 )

HSP 1 Score: 87.4 bits (215), Expect = 5.6e-18
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1  MDLHGPIHDFLVVLLGSDLISGSMGVLLFNNSIYFAFSLGLVLVSISLFYILANIQFVAV 60
          MDL GPIHDFL+V LGS L+ G +GV+L  N I+ AFSLG VLV ISL YIL+N  FVA 
Sbjct: 1  MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAA 60

Query: 61 MQLLIYVGAINVSIIFVMI 80
           QLLIYVGAINV IIF ++
Sbjct: 61 AQLLIYVGAINVLIIFAVM 79

The following BLAST results are available for this feature:

BLAST of Cmc06g0167391.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009560888.1	1.3e-21	86.08	NdhG [Trichosanthes kirilowii] >YP_009752464.1 NADH dehydrogenase subunit G [Tri...	[more]
YP_009447504.1	1.3e-21	86.08	NADH dehydrogenase subunit 6 [Cucurbita maxima] >YP_009447589.1 NADH dehydrogena...	[more]
YP_009317439.1	1.3e-21	86.08	NADH dehydrogenase subunit 6 [Coccinia grandis] >AOX48754.1 NADH dehydrogenase s...	[more]
YP_009525238.1	1.3e-21	86.08	NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa] >YP_009751704...	[more]
YP_004841838.1	1.3e-21	86.08	NADH-plastoquinone oxidoreductase subunit 6 [Cucumis melo subsp. melo] >YP_00986...	[more]

BLAST of Cmc06g0167391.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD38	1.7e-24	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q9M3I8	9.9e-20	76.32	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Spinacia oleracea OX=...	[more]
A7Y3L7	2.2e-19	73.42	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ipomoea purpurea OX=4...	[more]
Q09MC3	2.9e-19	70.89	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Citrus sinensis OX=27...	[more]
B2XWJ4	2.9e-19	72.15	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Fagopyrum esculentum ...	[more]

BLAST of Cmc06g0167391.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG81	6.4e-22	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A6H0ET31	6.4e-22	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A1X9Q1H7	6.4e-22	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A249RZE0	6.4e-22	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo var. can...	[more]
A0A1S4EU65	6.4e-22	86.08	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo OX=3656 ...	[more]

BLAST of Cmc06g0167391.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01080.1	5.6e-18	67.09	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042106	NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ	GENE3D	1.20.120.1200		coord: 9..80 e-value: 1.7E-12 score: 49.1
IPR001457	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	PFAM	PF00499	Oxidored_q3	coord: 23..78 e-value: 1.3E-10 score: 41.1
None	No IPR available	PANTHER	PTHR33269:SF5	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6	coord: 1..78
None	No IPR available	PANTHER	PTHR33269	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6	coord: 1..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc06g0167391	Cmc06g0167391	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0167391.1-exon	Cmc06g0167391.1-exon-CMiso1.1chr06:20555381..20555623	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc06g0167391.1-cds	Cmc06g0167391.1-cds-CMiso1.1chr06:20555381..20555623	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc06g0167391.1	Cmc06g0167391.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding