Homology
BLAST of Cmc05g0129161.1 vs. NCBI nr
Match:
TYK04394.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-130
Identity = 240/257 (93.39%), Postives = 248/257 (96.50%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKCPIC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
BLAST of Cmc05g0129161.1 vs. NCBI nr
Match:
TYK11299.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130
Identity = 240/257 (93.39%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 303 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 362
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 363 VLTKNGDFIGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 422
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 423 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 482
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLIKTKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 483 YVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 542
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 543 FCESNGIIHEFTAPYSP 559
BLAST of Cmc05g0129161.1 vs. NCBI nr
Match:
TYK27931.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 473.8 bits (1218), Expect = 9.5e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
BLAST of Cmc05g0129161.1 vs. NCBI nr
Match:
TYK05597.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 473.8 bits (1218), Expect = 9.5e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 367 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 426
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 427 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 486
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 487 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 546
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 547 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 606
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 607 FCESNGIIHEFTAPYSP 623
BLAST of Cmc05g0129161.1 vs. NCBI nr
Match:
KAA0036643.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 473.8 bits (1218), Expect = 9.5e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
BLAST of Cmc05g0129161.1 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 6.2e-39
Identity = 91/257 (35.41%), Postives = 141/257 (54.86%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGN++ + + G G + +K G TL L +V +VP LR NL+SG L+R + K
Sbjct: 324 MGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKW 383
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
LTK KG L+ N +++ I S +LWH R+GH++ ++ L
Sbjct: 384 RLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEI-SVDLWHKRMGHMSEKGLQILAK 443
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
LI+ ++ C C+ K H+ F+ R N+L++++SD+ S GG Y
Sbjct: 444 KSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKY 503
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
+V F+DD SR +Y++KTK++ F +F KF A E + G+K+KRLRSD GGEY+ + +E
Sbjct: 504 FVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEE 563
Query: 241 FCESNCIIHEFTAPYSP 258
+C S+ I HE T P +P
Sbjct: 564 YCSSHGIRHEKTVPGTP 579
BLAST of Cmc05g0129161.1 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 75/251 (29.88%), Postives = 122/251 (48.61%), Query Frame = 0
Query: 16 ILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKVVLTKNGDFFCKGY-L 75
I++L + ++L +V + NL+S L A + I + V ++KNG K +
Sbjct: 334 IVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGM 393
Query: 76 SNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLK------DLRLINTSE 135
N + V+N + + NA + LWH R GH++ + ++K D L+N E
Sbjct: 394 LNNVPVINFQAYSINAKHK----NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE 453
Query: 136 SHETGKCPICVESKFHKKPFKPVEYRT--TNLLEIIHSDLADFKTTTSRGGKNYYVFFVD 195
C C+ K + PFK ++ +T L ++HSD+ T + KNY+V FVD
Sbjct: 454 L-SCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVD 513
Query: 196 DYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKEFCESNC 255
++ + YLIK K++ FSMF F A+SE K+ L D G EY +++FC
Sbjct: 514 QFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKG 573
Query: 256 IIHEFTAPYSP 258
I + T P++P
Sbjct: 574 ISYHLTVPHTP 579
BLAST of Cmc05g0129161.1 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 74/247 (29.96%), Postives = 121/247 (48.99%), Query Frame = 0
Query: 20 TSGKTLSLSNVSYVPSLRRNLVSGSLL---NRAELKIVLEGDKVVLTKNGDFFCKGYLSN 79
TS ++L L+ V YVP++ +NL+S L NR ++ +V G +G +
Sbjct: 359 TSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKD 418
Query: 80 GLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRK-LKDLRLINTSESH 139
L+ +SM A+ S A + + WH RLGH + A + + + L + SH
Sbjct: 419 ELYEWPIASSQAVSMFASPCSKA----THSSWHSRLGHPSLAILNSVISNHSLPVLNPSH 478
Query: 140 ETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNYYVFFVDDYSR 199
+ C C +K HK PF ++ LE I+SD+ S YYV FVD ++R
Sbjct: 479 KLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTR 538
Query: 200 FTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKEFCESNCIIHE 258
+T +Y +K K++ F+ FK+ EN+ +I L SD GGE+ L+++ + I H
Sbjct: 539 YTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHF 598
BLAST of Cmc05g0129161.1 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 3.9e-17
Identity = 71/247 (28.74%), Postives = 117/247 (47.37%), Query Frame = 0
Query: 20 TSGKTLSLSNVSYVPSLRRNLVSGSLL---NRAELKIVLEGDKVVLTKNGDFFCKGYLSN 79
T + L+L N+ YVP++ +NL+S L N ++ +V G +G +
Sbjct: 380 TKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 439
Query: 80 GLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRK-LKDLRLINTSESH 139
L+ +S+ A+ SS A + + WH RLGH + + + + L + SH
Sbjct: 440 ELYEWPIASSQPVSLFASPSSKA----THSSWHARLGHPAPSILNSVISNYSLSVLNPSH 499
Query: 140 ETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNYYVFFVDDYSR 199
+ C C+ +K +K PF +T LE I+SD+ S YYV FVD ++R
Sbjct: 500 KFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTR 559
Query: 200 FTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKEFCESNCIIHE 258
+T +Y +K K++ F+ FK EN+ +I SD GGE+ L E+ + I H
Sbjct: 560 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHL 619
BLAST of Cmc05g0129161.1 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 6.6e-09
Identity = 66/240 (27.50%), Postives = 104/240 (43.33%), Query Frame = 0
Query: 20 TSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKVVL---TKNGDFF--CKGYL 79
TS K L N++Y L + ++ + D VL K+GDF+ K YL
Sbjct: 508 TSIKALHTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYL 567
Query: 80 SNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRK-LKDLRLINTSESH--- 139
TI+ N N S S L H LGH NF SI+K LK + ES
Sbjct: 568 IPSHISKLTIN-NVNKSKSVNKYPYP-LIHRMLGHANFRSIQKSLKKNAVTYLKESDIEW 627
Query: 140 ---ETGKCPICVESKF----HKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNYYVF 199
T +CP C+ K H K + + + +H+D+ + +Y++
Sbjct: 628 SNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFIS 687
Query: 200 FVDDYSRFTKIYLIKTKNE--AFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKEF 242
F D+ +RF +Y + + E ++F A +NQ ++ ++ DRG EY++KTL +F
Sbjct: 688 FTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKF 745
BLAST of Cmc05g0129161.1 vs. ExPASy TrEMBL
Match:
A0A5D3BZI1 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00770 PE=4 SV=1)
HSP 1 Score: 476.9 bits (1226), Expect = 5.5e-131
Identity = 240/257 (93.39%), Postives = 248/257 (96.50%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKCPIC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCPICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
BLAST of Cmc05g0129161.1 vs. ExPASy TrEMBL
Match:
A0A5D3CM58 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1827G00040 PE=4 SV=1)
HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130
Identity = 240/257 (93.39%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 303 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 362
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 363 VLTKNGDFIGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 422
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 423 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 482
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLIKTKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 483 YVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 542
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 543 FCESNGIIHEFTAPYSP 559
BLAST of Cmc05g0129161.1 vs. ExPASy TrEMBL
Match:
A0A5D3C1A6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00490 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 4.6e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 367 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 426
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 427 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 486
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 487 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 546
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 547 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 606
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 607 FCESNGIIHEFTAPYSP 623
BLAST of Cmc05g0129161.1 vs. ExPASy TrEMBL
Match:
A0A5D3DWC4 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001190 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 4.6e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
BLAST of Cmc05g0129161.1 vs. ExPASy TrEMBL
Match:
A0A5A7T166 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3921G00120 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 4.6e-130
Identity = 239/257 (93.00%), Postives = 247/257 (96.11%), Query Frame = 0
Query: 1 MGNSATAGVIGKGKVILKLTSGKTLSLSNVSYVPSLRRNLVSGSLLNRAELKIVLEGDKV 60
MGNSATAGVIGKGKVILKLTSGKTLSLSNV YVPSLRRNLVSGSLLNRA LKIVLEGDKV
Sbjct: 366 MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKV 425
Query: 61 VLTKNGDFFCKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 120
VLTKNGDF KGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD
Sbjct: 426 VLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKD 485
Query: 121 LRLINTSESHETGKCPICVESKFHKKPFKPVEYRTTNLLEIIHSDLADFKTTTSRGGKNY 180
+RLINTSE+HETGKC IC+ESKFHKKPFKPVEYRTT LLE+IHSDLADF+TT SRGGKNY
Sbjct: 486 MRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNY 545
Query: 181 YVFFVDDYSRFTKIYLIKTKNEAFSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKE 240
YV FVDDYSRFTKIYLI+TKNEA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLKE
Sbjct: 546 YVSFVDDYSRFTKIYLIRTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKE 605
Query: 241 FCESNCIIHEFTAPYSP 258
FCESN IIHEFTAPYSP
Sbjct: 606 FCESNGIIHEFTAPYSP 622
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK04394.1 | 1.1e-130 | 93.39 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK11299.1 | 3.3e-130 | 93.39 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK27931.1 | 9.5e-130 | 93.00 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK05597.1 | 9.5e-130 | 93.00 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0036643.1 | 9.5e-130 | 93.00 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.2e-39 | 35.41 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 1.2e-23 | 29.88 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 1.9e-19 | 29.96 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 3.9e-17 | 28.74 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 6.6e-09 | 27.50 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BZI1 | 5.5e-131 | 93.39 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3CM58 | 1.6e-130 | 93.39 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3C1A6 | 4.6e-130 | 93.00 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3DWC4 | 4.6e-130 | 93.00 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7T166 | 4.6e-130 | 93.00 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |