Cmc04g0088221.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0088221.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger CCCH domain-containing protein 12 isoform X2
Location	CMiso1.1chr04: 882858 .. 886266 (-)
Sequence length	2283
RNA-Seq Expression	Cmc04g0088221.1
Synteny	Cmc04g0088221.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAACAAAGGAGTTAAAAGAGAATCTATTAAACACTACTCAATTTATTAGAACTAAACTTGTAACTTCTATTATCATTATTGGCTTTTTGTAATCTTTGGATATCATTAATTTAGACAAAGGCATGAGATTTGGAGAGGAAAAAGGAGAAGTTTTTAGTTTTATTTACAAAATTTATAGGGTGGGGGAGTTTGGAAATCCTTCTCTGTTCTGTTCTTTCTTCTTACAAGTTATCTCATCATTTTTATCGCACTTCAAATCTAACCTCTATTACTCTTATCTATTTTCCTTCCATTTTTAATTCCCAACCACCCTTGTTTTTCGCTCACTTGTTCTTCTTTTCATCTTCATAGATCTCTCCCATCTTCTTACTAACTTTTTTTTTTTTTTCTCGCATTTCTTCTCCTCTTCGATCTGTTCTTCTTTTTCTTTTTTCTCCATTTTTGTAATGGGGTGGCCTAATTTTTCACCTTTCAACTTCCAGGAACTTTTATTCTTTGTAGTTTGAAGAAACCCATTTGTGTATTTCTCCTCAAAATTTTCCCAAAGCTGGAGAAACCTTTGGTAACCATGTCTCTGCAATTAGGGTTTTATGGGTGTTTGTTTTGTGTGACGATTTTGTAGCTTTTTGGAAGTAATAATTTCTGGGTTTTTTCTTTTATCGTGGTGGGTGTGATTATTTGGAATGGATTATAGTGGAGGAAACGTGGTTCATGTGATCTCTGGGACGAGCAGTGAGAATTGGCCAGGGGAAGTTTGGGCTACAGAAGATGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTTGATACGCCTTCTAATTCGAGTTATGATCAAAGGCAATCTCAAAGCCGGTCCGGTAGCGAACCCCCAAACAAAAAATCCAGAAGCTCACAGGATGTTACATCTTCGAATCGATCGAAAGCGATAGGAAAAATGTTTTTCAAGACCAAACTTTGCTGCAAATTCCGTGCTGGAACTTGTCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAACTCAGGCGACCACCACATAATTGGCAGGTATTAGGATTGGTTCTTAGTTAATAGTTGATTTTTTTCTTTTTTGTTATTTGCTCTCTTTAATTGTTAGCTTGATAGTTGAAATCCATAGTTGGGGTAGTTTAGTTCTGTTACAAAATTGGTTGAATACAATATCATGAGTTCCTTATTGCACTGAGTCTTGTCAGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCGGTATTGTCGGAGCCAAGGGAGGAATTTCAAATTCCTTCGCTTGGGACATCGAATTTTGGTTCTGAATCGCAGAGGTCATATAAAGGTCGACACTGCAAGAAGTTTTACACAGAGGAGGGGTGTCCATATGGGGATAGTTGTACGTTTCTTCATGACGAGCAGTCTAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGATACAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACAAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGTCCATTTGGGAACAAATGCCATTTTGCTCATGGTGCTGCTGGTATGTTCCCTCATAGTTTCTTCTATCTCTCCTTTTGGTAATGAAATGATTGTAAATTTGTAATATGAAACTACATTTTAAAGGGAAATGTTCCAATAAAGAAAGATTATGTCTCTACAGTCTCTCAATGATTGTTGGCGTGACTAAATGGAATCTACATGAAATCACTACTTGGGTTGTTAGTATACAATTTCCATAGCTGTTCGATCACTTAGTCTGTCAGTGCTCAACACTTAAGGCCCAAGCCATGGATGAAGATAGTCTTTCTAATATCTTTGAAAGAAATTGTTCTTATGATACCCTATAGGTTATGGTTACCTCTGCTCAATCTTGCTTGACTTTCGTTGTGATTTTATAGAAAAATGGTTCCATGTGTGGCCTAAGTTTGTTTCTTTAGTGTCTGCCACTTGCATATGGCATAAATCTTTAATCAAGTCCATTTACTCCCGTTACTTCCTCTTTAATTCTGTATTGTTTTACTTTAACAATGTGAGATTTTCTTTTAACTTGCAAGACTCTGAAATCAACTGAAGAGTTTGTAGATACCATTGTTAAATATTCTAGCAAAGATTTTTTTCTGATTCAATCTGGAGTTTTAAACGACTTTGGAGAATATAAGGAAAGTTTTAAGATTCTATAATGCTATTGTTCATTAAATACATCTTGCCAATTGACTACAAAAAAGAATCTATTTTACTTGGGGAGTGTTTTCAGAAAGTATAGGTTGAGTATTTTTATGAGAACTTGTTGTCATGCTCATGCATATATCTAACTAGCCTTCCCATGATTTTTAATGCTTTTGTTTCTTTGAGTCACCCTGATTCATGTCAATTCTGATATAGCCATATAGGTTGAGTCGGTTAACCCATTAGGATATTGTTGTGTCTTCAAAAGGAACGTTGAATGAGTTCTTTAGTTTTAGTGCTTTTAGATTTAATACTTTGAATTAACCACAGAATTGCACCGTTATGGCGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCAGCTGCGCCTCCTGACCCGAAGCAGGGCGTATTGCCAAAAGCTCCCGGCGATACTTTGGTTGCTTCTGTTCCTTCAGTACCTCATTCAGATGTTTACCATGTGGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGGCAGAGAACTCATCAGAAGTGGAAGGGTCCCGATAAAATCAGTCGGATATATGGTGATTGGATTGACGACATTGAATAATATGGTATCCAAGTAGTCGCTGAACGTGAATAACGAGAACTTAAAAGTTCCATAGTTAACAGGCATTGTGATGGACTTGGTCTCTCATAAGCATTTGGCAGATGAAGATTCTGTTTGTTCGGGTTAAGTTTCGATCGGTTCTTTTCATATTCTCGTCGCCAACCCCACTTCACTTCCGAGGTTTGAGAAAATTGAAGCATATGGTCTTTATCTGTTAGAGTTGTTATCTTCTGTAGTTAATGTAATCTTTTTTCTTCTAAAGAAAAAGAAAAATGTATGAATGTCATCACCACCCCTTCTTAGTTCATAATTGATTAATTCTTGTGTGTTCTGGGAAATCTTTAACCTTATTGTAGTTGGGAATATTAGTCCTTCAAATGAGGCAGGGCAGCAATTTTTATACACTGACATTGTGATTGCTGAGGTTCCTACATTGTAGTGTTGTTAGTTAGACTGTTACATTGTTTCCCCTTTTTTGTATAATGTGTTGTAGATTACAATATTCTCTTTACAGTTATCGTTCATCGTTCATATCCTTCTTCCTCTC

mRNA sequence

TTTTAACAAAGGAGTTAAAAGAGAATCTATTAAACACTACTCAATTTATTAGAACTAAACTTGTAACTTCTATTATCATTATTGGCTTTTTGTAATCTTTGGATATCATTAATTTAGACAAAGGCATGAGATTTGGAGAGGAAAAAGGAGAAGTTTTTAGTTTTATTTACAAAATTTATAGGGTGGGGGAGTTTGGAAATCCTTCTCTGTTCTGTTCTTTCTTCTTACAAGTTATCTCATCATTTTTATCGCACTTCAAATCTAACCTCTATTACTCTTATCTATTTTCCTTCCATTTTTAATTCCCAACCACCCTTGTTTTTCGCTCACTTGTTCTTCTTTTCATCTTCATAGATCTCTCCCATCTTCTTACTAACTTTTTTTTTTTTTTCTCGCATTTCTTCTCCTCTTCGATCTGTTCTTCTTTTTCTTTTTTCTCCATTTTTGTAATGGGGTGGCCTAATTTTTCACCTTTCAACTTCCAGGAACTTTTATTCTTTGTAGTTTGAAGAAACCCATTTGTGTATTTCTCCTCAAAATTTTCCCAAAGCTGGAGAAACCTTTGGTAACCATGTCTCTGCAATTAGGGTTTTATGGGTGTTTGTTTTGTGTGACGATTTTGTAGCTTTTTGGAAGTAATAATTTCTGGGTTTTTTCTTTTATCGTGGTGGGTGTGATTATTTGGAATGGATTATAGTGGAGGAAACGTGGTTCATGTGATCTCTGGGACGAGCAGTGAGAATTGGCCAGGGGAAGTTTGGGCTACAGAAGATGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTTGATACGCCTTCTAATTCGAGTTATGATCAAAGGCAATCTCAAAGCCGGTCCGGTAGCGAACCCCCAAACAAAAAATCCAGAAGCTCACAGGATGTTACATCTTCGAATCGATCGAAAGCGATAGGAAAAATGTTTTTCAAGACCAAACTTTGCTGCAAATTCCGTGCTGGAACTTGTCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAACTCAGGCGACCACCACATAATTGGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCGGTATTGTCGGAGCCAAGGGAGGAATTTCAAATTCCTTCGCTTGGGACATCGAATTTTGGTTCTGAATCGCAGAGGTCATATAAAGGTCGACACTGCAAGAAGTTTTACACAGAGGAGGGGTGTCCATATGGGGATAGTTGTACGTTTCTTCATGACGAGCAGTCTAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGATACAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACAAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGTCCATTTGGGAACAAATGCCATTTTGCTCATGGTGCTGCTGAATTGCACCGTTATGGCGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCAGCTGCGCCTCCTGACCCGAAGCAGGGCGTATTGCCAAAAGCTCCCGGCGATACTTTGGTTGCTTCTGTTCCTTCAGTACCTCATTCAGATGTTTACCATGTGGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGGCAGAGAACTCATCAGAAGTGGAAGGGTCCCGATAAAATCAGTCGGATATATGGTGATTGGATTGACGACATTGAATAATATGGTATCCAAGTAGTCGCTGAACGTGAATAACGAGAACTTAAAAGTTCCATAGTTAACAGGCATTGTGATGGACTTGGTCTCTCATAAGCATTTGGCAGATGAAGATTCTGTTTGTTCGGGTTAAGTTTCGATCGGTTCTTTTCATATTCTCGTCGCCAACCCCACTTCACTTCCGAGGTTTGAGAAAATTGAAGCATATGGTCTTTATCTGTTAGAGTTGTTATCTTCTGTAGTTAATGTAATCTTTTTTCTTCTAAAGAAAAAGAAAAATGTATGAATGTCATCACCACCCCTTCTTAGTTCATAATTGATTAATTCTTGTGTGTTCTGGGAAATCTTTAACCTTATTGTAGTTGGGAATATTAGTCCTTCAAATGAGGCAGGGCAGCAATTTTTATACACTGACATTGTGATTGCTGAGGTTCCTACATTGTAGTGTTGTTAGTTAGACTGTTACATTGTTTCCCCTTTTTTGTATAATGTGTTGTAGATTACAATATTCTCTTTACAGTTATCGTTCATCGTTCATATCCTTCTTCCTCTC

Coding sequence (CDS)

ATGGATTATAGTGGAGGAAACGTGGTTCATGTGATCTCTGGGACGAGCAGTGAGAATTGGCCAGGGGAAGTTTGGGCTACAGAAGATGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTTGATACGCCTTCTAATTCGAGTTATGATCAAAGGCAATCTCAAAGCCGGTCCGGTAGCGAACCCCCAAACAAAAAATCCAGAAGCTCACAGGATGTTACATCTTCGAATCGATCGAAAGCGATAGGAAAAATGTTTTTCAAGACCAAACTTTGCTGCAAATTCCGTGCTGGAACTTGTCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAACTCAGGCGACCACCACATAATTGGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCGGTATTGTCGGAGCCAAGGGAGGAATTTCAAATTCCTTCGCTTGGGACATCGAATTTTGGTTCTGAATCGCAGAGGTCATATAAAGGTCGACACTGCAAGAAGTTTTACACAGAGGAGGGGTGTCCATATGGGGATAGTTGTACGTTTCTTCATGACGAGCAGTCTAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGATACAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACAAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGTCCATTTGGGAACAAATGCCATTTTGCTCATGGTGCTGCTGAATTGCACCGTTATGGCGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCAGCTGCGCCTCCTGACCCGAAGCAGGGCGTATTGCCAAAAGCTCCCGGCGATACTTTGGTTGCTTCTGTTCCTTCAGTACCTCATTCAGATGTTTACCATGTGGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGGCAGAGAACTCATCAGAAGTGGAAGGGTCCCGATAAAATCAGTCGGATATATGGTGATTGGATTGACGACATTGAATAA

Protein sequence

MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE

Homology

[Close]

BLAST of Cmc04g0088221.1 vs. NCBI nr
Match: TYK31177.1 (zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 708.8 bits (1828), Expect = 2.4e-200
Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240
           SCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300
           TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS
Sbjct: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300

Query: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 348

[Close]

BLAST of Cmc04g0088221.1 vs. NCBI nr
Match: XP_008465989.1 (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo])

HSP 1 Score: 707.2 bits (1824), Expect = 7.0e-200
Identity = 347/349 (99.43%), Postives = 347/349 (99.43%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240
           SCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300
           TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS
Sbjct: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300

Query: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 348

[Close]

BLAST of Cmc04g0088221.1 vs. NCBI nr
Match: XP_004136190.3 (zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis sativus])

HSP 1 Score: 703.4 bits (1814), Expect = 1.0e-198
Identity = 346/350 (98.86%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTS+ENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSNENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240
           SCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240

Query: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300
           LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPD KQGVLPKAPGDTLVASVP
Sbjct: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVASVP 300

Query: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           S PHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 SAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350

[Close]

BLAST of Cmc04g0088221.1 vs. NCBI nr
Match: XP_008465987.1 (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis melo])

HSP 1 Score: 702.6 bits (1812), Expect = 1.7e-198
Identity = 347/350 (99.14%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 HNW-QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           HNW QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 HNWQQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240
           DSCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240

Query: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300
           LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP
Sbjct: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300

Query: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 349

[Close]

BLAST of Cmc04g0088221.1 vs. NCBI nr
Match: XP_011652645.2 (zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis sativus])

HSP 1 Score: 698.7 bits (1802), Expect = 2.5e-197
Identity = 346/351 (98.58%), Postives = 347/351 (98.86%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTS+ENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSNENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 HNW-QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           HNW QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 HNWQQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGGSGNGSNTKPSNWKTRICNKW 240
           DSCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGGSGNGSNTKPSNWKTRICNKW
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKW 240

Query: 241 ELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASV 300
           ELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPD KQGVLPKAPGDTLVASV
Sbjct: 241 ELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVASV 300

Query: 301 PSVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           PS PHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 PSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 351

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-116
Identity = 242/394 (61.42%), Postives = 270/394 (68.53%), Query Frame = 0


Query: 4   SGGNVVHVI--SGTSSENW-----PGEVWATEDEY-RAWNNGGDGSVDTPSNSSYDQRQS 63
           SGG+VVHVI  +    +NW        VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRSSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+R S   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPHNWQEIVAAHEEEK---------AVLSEPREEFQIPSLGTSNFGSESQ 183
           FAH++EELRRPP NWQEIVAAHEEE+         +V+  PREEFQIPSL +S   +ES 
Sbjct: 128 FAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESG 187

Query: 184 RSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGG------ 243
           RS+KGRHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG       
Sbjct: 188 RSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVG 247

Query: 244 -----------GGGGGSGNGSN---TKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAEL 303
                      GGGGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAEL
Sbjct: 248 GGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 307

Query: 304 HRYGGGLMETETRDSSAAPPDPKQGVL-PKAPGDTLVASVPSVPHS--DVYHVVVPSQR- 350
           HR+GGGL+E E +D  +  PD KQ V  PK   DT     P VPH+    YH  V  QR 
Sbjct: 308 HRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRA 367

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.2e-107
Identity = 222/390 (56.92%), Postives = 264/390 (67.69%), Query Frame = 0


Query: 1   MDYSGGNVVHVI---------SGTSSENWPGEVWATEDEYRA-WNNGGDGSVDTPSNSSY 60
           MDY+  N +H+I         +  +++     +WATED+Y + WN  G G          
Sbjct: 1   MDYT--NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGG--------- 60

Query: 61  DQRQSQSRSGSE--PPNKKSR---SSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYIT 120
                 SR+GSE  PP KKSR     +   ++++S+AIGKMFFKTKLCCKFRAGTCPY+T
Sbjct: 61  ----GSSRAGSEQPPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVT 120

Query: 121 NCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTS------------N 180
           NCNFAH +EELR+PP NWQEIVAAHEE     +E REE QIP + +S             
Sbjct: 121 NCNFAHGMEELRKPPPNWQEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGCGGG 180

Query: 181 FGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGG 240
            G  S R+YKGRHCKKFYT+EGCPYGD+CTFLHDEQSK RESVAISL P   S GGGGGG
Sbjct: 181 GGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSP---SVGGGGGG 240

Query: 241 G-----------GGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRY 300
           G               +GNG   KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAELH+Y
Sbjct: 241 GSYNSAAAAAASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKY 300

Query: 301 GGGLMETETRDSSAAPPDPKQGVL-PKAPGDTLVASVPSVPHSDVYHVVVPSQRSTIVIQ 350
           GGGL++ ++RD +AA PD KQ V+  KAP +T  AS   +PH+DVYH+ V +QRSTI  Q
Sbjct: 301 GGGLVDIDSRD-AAATPDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQ 360

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-49
Identity = 138/334 (41.32%), Postives = 163/334 (48.80%), Query Frame = 0


Query: 24  VWATEDEY-RAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKA 83
           VWATED+Y R W    D                    G+E P+KK+RSS        S  
Sbjct: 34  VWATEDDYSRVWAINSD--------------------GAESPSKKTRSSS-------SSE 93

Query: 84  IGKMFFKTKLCCKFRAGTCPY-ITNCNFAHSIEELR---RPPHNWQEIVAAHEEEKAVLS 143
           IGK FFKTKLC KFRAGTCPY  ++C+FAHS EELR    PP NWQE V           
Sbjct: 94  IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT---------- 153

Query: 144 EPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 203
                                                            E S+NRES A+
Sbjct: 154 -------------------------------------------------EASRNRESFAV 213

Query: 204 SLGPGGYSGGGGGGGGGGGGSGNGSNT-KPSNWKTRICNKWELTGYCPFGNKCHFAHGAA 263
           SLGP                 GN + T K  NWKTRICNKW+ TGYCPFG+ CHFAHG +
Sbjct: 214 SLGP----------------RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPS 252

Query: 264 ELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVPHSDVYHVVVPSQR-S 323
           ELH +GGGL+E E +  ++A  D KQ    +   DT+ + V            V SQR S
Sbjct: 274 ELHTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTSLVSP---------GVSSQRTS 252

Query: 324 TIVIQRP-GQRTHQKWKGPDKISRIYGDWIDDIE 350
           + V Q+P G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 334 SAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.8e-34
Identity = 109/294 (37.07%), Postives = 145/294 (49.32%), Query Frame = 0


Query: 80  SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIV----AAHEEEKA 139
           +K    +F+KT++C KFRAGTC     CNFAH IE+LR+PP NWQEIV    A  + E+ 
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERE 156

Query: 140 VLSEPREEFQIPSLG---TSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS-- 199
              E   E + PSL     +N+  + +   + + C+KF   E CPYGD C F+H++ S  
Sbjct: 157 --RERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKF 216

Query: 200 -----KNRESVAISLGPGGYSGGGGGGGG----GGGGS-------GNGSNTKPSNWKTRI 259
                K RES  IS+G                    GS        NG   K   WKTR+
Sbjct: 217 REDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRL 276

Query: 260 CNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTL 319
           C K+++TG CPFG+KCHFAHG AELH   G     E    +A     KQ V+   P +  
Sbjct: 277 CMKFDITGQCPFGDKCHFAHGQAELHNSVG---RVEGEAMNAVASVNKQAVV---PANEA 336

Query: 320 VASVPSVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDI 349
            A  P           V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 337 FAMKPITQ--------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 163 KGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNG 222
           K + C KF++  GCP+G SC FLH+     + +  ++   G       G    G G+ NG
Sbjct: 34  KLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNG 93

Query: 223 SNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAEL 260
             T  S+ KTR+CNK+     C +G+KCHFAHG  EL
Sbjct: 94  PPT--SSVKTRMCNKYNTAEGCKWGSKCHFAHGEREL 128

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL
Match: A0A5D3E502 (Zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004590 PE=4 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 1.2e-200
Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240
           SCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300
           TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS
Sbjct: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300

Query: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 348

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL
Match: A0A1S3CQH8 (zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503556 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.4e-200
Identity = 347/349 (99.43%), Postives = 347/349 (99.43%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240
           SCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWEL 240

Query: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300
           TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS
Sbjct: 241 TGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPS 300

Query: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 VPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 348

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL
Match: A0A0A0LK26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901160 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 8.3e-199
Identity = 346/352 (98.30%), Postives = 347/352 (98.58%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTS+ENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSNENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120

Query: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180
           HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD
Sbjct: 121 HNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGD 180

Query: 181 SCTFLHDEQSKNRESVAISLGPGGYS---GGGGGGGGGGGGSGNGSNTKPSNWKTRICNK 240
           SCTFLHDEQSKNRESVAISLGPGGYS   GGGGGGGGGGGGSGNGSNTKPSNWKTRICNK
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGGGSGNGSNTKPSNWKTRICNK 240

Query: 241 WELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVAS 300
           WELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPD KQGVLPKAPGDTLVAS
Sbjct: 241 WELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLPKAPGDTLVAS 300

Query: 301 VPSVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           VPS PHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 VPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 352

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ64 (zinc finger CCCH domain-containing protein 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503556 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 8.3e-199
Identity = 347/350 (99.14%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60
           MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG
Sbjct: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSG 60

Query: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPP 120
           SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNF HSIEELRRPP
Sbjct: 61  SEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFGHSIEELRRPP 120

Query: 121 HNW-QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           HNW QEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 HNWQQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240
           DSCTFLHDEQSKNRESVAISLGPGGYS GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYS-GGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240

Query: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300
           LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP
Sbjct: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300

Query: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 349

[Close]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL
Match: A0A6J1HL53 (zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463955 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 6.8e-193
Identity = 336/350 (96.00%), Postives = 343/350 (98.00%), Query Frame = 0


Query: 1   MDYSGGNVVHVISGTSSENWPGEVWATEDEYRAWNN-GGDGSVDTPSNSSYDQRQSQSRS 60
           MDYSGGNVVHVI G SSENWPGEVWATE+EYRAWNN GGDGS+DTPSNSSYDQRQSQSRS
Sbjct: 1   MDYSGGNVVHVIPGMSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRS 60

Query: 61  GSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRP 120
           GSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRP
Sbjct: 61  GSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRP 120

Query: 121 PHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180
           PHNWQEIVAAHEEEK V SEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG
Sbjct: 121 PHNWQEIVAAHEEEK-VFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYG 180

Query: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNTKPSNWKTRICNKWE 240
           DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSN+KPSNWKTRICNKWE
Sbjct: 181 DSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWE 240

Query: 241 LTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVP 300
           LTGYCPFG+KCHFAHGAAELHRYGGGLMETETRDSS+APPD KQGVLPKAPGDTLVASVP
Sbjct: 241 LTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVP 300

Query: 301 SVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
           S+PHSDVYH+VVPSQRSTIVIQR GQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 301 SLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 349

[Close]

BLAST of Cmc04g0088221.1 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 419.9 bits (1078), Expect = 2.1e-117
Identity = 242/394 (61.42%), Postives = 270/394 (68.53%), Query Frame = 0


Query: 4   SGGNVVHVI--SGTSSENW-----PGEVWATEDEY-RAWNNGGDGSVDTPSNSSYDQRQS 63
           SGG+VVHVI  +    +NW        VWATED+Y RAW          P N+S D    
Sbjct: 8   SGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW-------AMNPDNTSGD---- 67

Query: 64  QSRSGSEPPNKKSRSSQDVTS-------SNRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 123
                + PPNKK+R S   +S       SNR+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct: 68  ----NNGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 127

Query: 124 FAHSIEELRRPPHNWQEIVAAHEEEK---------AVLSEPREEFQIPSLGTSNFGSESQ 183
           FAH++EELRRPP NWQEIVAAHEEE+         +V+  PREEFQIPSL +S   +ES 
Sbjct: 128 FAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESG 187

Query: 184 RSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGG------ 243
           RS+KGRHCKKFYTEEGCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG       
Sbjct: 188 RSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVG 247

Query: 244 -----------GGGGGSGNGSN---TKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAEL 303
                      GGGGGSG+GS     KPSNWKTRICNKWE+TGYCPFG KCHFAHGAAEL
Sbjct: 248 GGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 307

Query: 304 HRYGGGLMETETRDSSAAPPDPKQGVL-PKAPGDTLVASVPSVPHS--DVYHVVVPSQR- 350
           HR+GGGL+E E +D  +  PD KQ V  PK   DT     P VPH+    YH  V  QR 
Sbjct: 308 HRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRA 367

[Close]

BLAST of Cmc04g0088221.1 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-50
Identity = 138/334 (41.32%), Postives = 163/334 (48.80%), Query Frame = 0


Query: 24  VWATEDEY-RAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKA 83
           VWATED+Y R W    D                    G+E P+KK+RSS        S  
Sbjct: 34  VWATEDDYSRVWAINSD--------------------GAESPSKKTRSSS-------SSE 93

Query: 84  IGKMFFKTKLCCKFRAGTCPY-ITNCNFAHSIEELR---RPPHNWQEIVAAHEEEKAVLS 143
           IGK FFKTKLC KFRAGTCPY  ++C+FAHS EELR    PP NWQE V           
Sbjct: 94  IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT---------- 153

Query: 144 EPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 203
                                                            E S+NRES A+
Sbjct: 154 -------------------------------------------------EASRNRESFAV 213

Query: 204 SLGPGGYSGGGGGGGGGGGGSGNGSNT-KPSNWKTRICNKWELTGYCPFGNKCHFAHGAA 263
           SLGP                 GN + T K  NWKTRICNKW+ TGYCPFG+ CHFAHG +
Sbjct: 214 SLGP----------------RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPS 252

Query: 264 ELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTLVASVPSVPHSDVYHVVVPSQR-S 323
           ELH +GGGL+E E +  ++A  D KQ    +   DT+ + V            V SQR S
Sbjct: 274 ELHTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTSLVSP---------GVSSQRTS 252

Query: 324 TIVIQRP-GQRTHQKWKGPDKISRIYGDWIDDIE 350
           + V Q+P G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 334 SAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

[Close]

BLAST of Cmc04g0088221.1 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-35
Identity = 109/294 (37.07%), Postives = 145/294 (49.32%), Query Frame = 0


Query: 80  SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIV----AAHEEEKA 139
           +K    +F+KT++C KFRAGTC     CNFAH IE+LR+PP NWQEIV    A  + E+ 
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERE 156

Query: 140 VLSEPREEFQIPSLG---TSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS-- 199
              E   E + PSL     +N+  + +   + + C+KF   E CPYGD C F+H++ S  
Sbjct: 157 --RERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKF 216

Query: 200 -----KNRESVAISLGPGGYSGGGGGGGG----GGGGS-------GNGSNTKPSNWKTRI 259
                K RES  IS+G                    GS        NG   K   WKTR+
Sbjct: 217 REDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRL 276

Query: 260 CNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDPKQGVLPKAPGDTL 319
           C K+++TG CPFG+KCHFAHG AELH   G     E    +A     KQ V+   P +  
Sbjct: 277 CMKFDITGQCPFGDKCHFAHGQAELHNSVG---RVEGEAMNAVASVNKQAVV---PANEA 336

Query: 320 VASVPSVPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDI 349
            A  P           V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 337 FAMKPITQ--------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

[Close]

BLAST of Cmc04g0088221.1 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-07
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 212 GGGGGGGSGNGSNTKP---SNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYG 264
           GGG GGG G GS  KP   SN+KT+IC ++   G C FG++CHFAHG AEL + G
Sbjct: 193 GGGLGGGGGMGSEGKPHPGSNFKTKICERFS-KGNCTFGDRCHFAHGEAELRKSG 246

The following BLAST results are available for this feature:

BLAST of Cmc04g0088221.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK31177.1	2.4e-200	99.71	zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo var. maku...	[more]
XP_008465989.1	7.0e-200	99.43	PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis mel...	[more]
XP_004136190.3	1.0e-198	98.86	zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis sativus]	[more]
XP_008465987.1	1.7e-198	99.14	PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis mel...	[more]
XP_011652645.2	2.5e-197	98.58	zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis sativus]	[more]

BLAST of Cmc04g0088221.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQM3	2.9e-116	61.42	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	4.2e-107	56.92	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q5PP65	2.3e-49	41.32	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LT81	4.8e-34	37.07	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q69XQ3	1.9e-06	39.18	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Cmc04g0088221.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E502	1.2e-200	99.71	Zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo var. ma...	[more]
A0A1S3CQH8	3.4e-200	99.43	zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A0A0LK26	8.3e-199	98.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901160 PE=4 SV=1	[more]
A0A1S3CQ64	8.3e-199	99.14	zinc finger CCCH domain-containing protein 12 isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A6J1HL53	6.8e-193	96.00	zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita moschata O...	[more]

BLAST of Cmc04g0088221.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32360.1	2.1e-117	61.42	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	1.7e-50	41.32	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G19360.1	3.4e-35	37.07	Zinc finger (CCCH-type) family protein	[more]
AT3G12130.1	3.0e-07	56.36	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 87..113 e-value: 0.0035 score: 26.6 coord: 161..188 e-value: 0.086 score: 22.0 coord: 229..256 e-value: 6.3E-9 score: 45.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 88..112 e-value: 1.9E-5 score: 24.4 coord: 230..255 e-value: 1.1E-10 score: 41.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 87..114 score: 12.840159
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 229..257 score: 15.22499
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 161..189 score: 14.098298
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 165..187 e-value: 2.4E-7 score: 30.4
None	No IPR available	GENE3D	4.10.1000.10		coord: 82..118 e-value: 4.9E-11 score: 43.8 coord: 222..261 e-value: 2.5E-15 score: 57.6
None	No IPR available	GENE3D	4.10.1000.10		coord: 151..202 e-value: 3.8E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..78
None	No IPR available	PANTHER	PTHR12547:SF136	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 21..346
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 21..346
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 85..118
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 226..260
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 160..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0088221	Cmc04g0088221	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088221.1-exon	Cmc04g0088221.1-exon-CMiso1.1chr04:882858..883682	exon
Cmc04g0088221.1-exon	Cmc04g0088221.1-exon-CMiso1.1chr04:884639..885038	exon
Cmc04g0088221.1-exon	Cmc04g0088221.1-exon-CMiso1.1chr04:885209..886266	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088221.1-three_prime_utr	Cmc04g0088221.1-three_prime_utr-CMiso1.1chr04:882858..883404	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088221.1-cds	Cmc04g0088221.1-cds-CMiso1.1chr04:883405..883682	CDS
Cmc04g0088221.1-cds	Cmc04g0088221.1-cds-CMiso1.1chr04:884639..885038	CDS
Cmc04g0088221.1-cds	Cmc04g0088221.1-cds-CMiso1.1chr04:885209..885580	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088221.1-five_prime_utr	Cmc04g0088221.1-five_prime_utr-CMiso1.1chr04:885581..886266	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0088221.1	Cmc04g0088221.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003729	mRNA binding