|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGGATCTCTATCCCATGGGAAAAGGGGTGGGTGGAGATTGCTTTGCTTGTAAGGATGTAATAACTTTTTATTATACTTTCTGGCAATGACACCTACAGCTTTGCTGACGCGTTTTTCTCTGTATACTACTAAATCCTCCCTTGAATAACGCAAAGTCCAATTCTCTTTAGAACATTATTATGCTTCTTCCACTTACAGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGTATTCTTACTATTCTGTTTCCCTTCATTGCTTTTCTTTTATTCATATATTCATTACGTTTGGAAGTTTCTCACTATGTCAAGACTAAACCCATATGTTTACAGAAAAACATAAAAAAGAAACAGAATGAAGAATTCTAAAATCTTGAAAATTATATCTTCAAACGTTTATCTCAATTGAGCACTTAAGTTTGGGAGAATGAAAGAACATAATATAGCATATCAGTTTGGCAAGTCTCAGTAAAATCTGTATTCTGATCTCTGCCTTGTTTTTACATGTAGGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG mRNA sequence ATGAGGGATCTCTATCCCATGGGAAAAGGGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG Coding sequence (CDS) ATGAGGGATCTCTATCCCATGGGAAAAGGGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG Protein sequence MRDLYPMGKGYVLHYSLADAIIDFPIMTIHSPHGMDDISSPHLNSIRRITKNWAVKWERMQYMVQPHFFLCFSIAWPSFIQCFEAARNQIDNTMRRKNESSVQLLNYLLLLCVNVLY
Homology
BLAST of CmaCh15G010030.1 vs. NCBI nr
Match: KAG6579300.1 (hypothetical protein SDJN03_23748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.4 bits (246), Expect = 2.2e-17 Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 Query: 17 LADAIIDFPIMTIHSPHGMDDISSPHLNSIRRITKNWAVKWERMQYM 64 LADAIIDFPIMTIHSPHGMDDISSPHLN IRRI KNWAVKWERMQYM Sbjct: 57 LADAIIDFPIMTIHSPHGMDDISSPHLNPIRRIIKNWAVKWERMQYM 103
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6579300.1 | 2.2e-17 | 95.74 | hypothetical protein SDJN03_23748, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh15G010030.1:exon:898 | CmaCh15G010030.1:exon:898 | exon |
CmaCh15G010030.1:exon:897 | CmaCh15G010030.1:exon:897 | exon |
CmaCh15G010030.1:exon:896 | CmaCh15G010030.1:exon:896 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh15G010030.1:cds | CmaCh15G010030.1:cds_3 | CDS |
CmaCh15G010030.1:cds | CmaCh15G010030.1:cds_2 | CDS |
CmaCh15G010030.1:cds | CmaCh15G010030.1:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmaCh15G010030.1 | CmaCh15G010030.1-protein | polypeptide |
|