CmaCh15G010030 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G010030
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr15: 6067310 .. 6068116 (-)
RNA-Seq ExpressionCmaCh15G010030
SyntenyCmaCh15G010030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGATCTCTATCCCATGGGAAAAGGGGTGGGTGGAGATTGCTTTGCTTGTAAGGATGTAATAACTTTTTATTATACTTTCTGGCAATGACACCTACAGCTTTGCTGACGCGTTTTTCTCTGTATACTACTAAATCCTCCCTTGAATAACGCAAAGTCCAATTCTCTTTAGAACATTATTATGCTTCTTCCACTTACAGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGTATTCTTACTATTCTGTTTCCCTTCATTGCTTTTCTTTTATTCATATATTCATTACGTTTGGAAGTTTCTCACTATGTCAAGACTAAACCCATATGTTTACAGAAAAACATAAAAAAGAAACAGAATGAAGAATTCTAAAATCTTGAAAATTATATCTTCAAACGTTTATCTCAATTGAGCACTTAAGTTTGGGAGAATGAAAGAACATAATATAGCATATCAGTTTGGCAAGTCTCAGTAAAATCTGTATTCTGATCTCTGCCTTGTTTTTACATGTAGGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG

mRNA sequence

ATGAGGGATCTCTATCCCATGGGAAAAGGGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG

Coding sequence (CDS)

ATGAGGGATCTCTATCCCATGGGAAAAGGGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACTCCATCAGAAGGATTACAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACAGCCGCATTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATGAGGAGAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAG

Protein sequence

MRDLYPMGKGYVLHYSLADAIIDFPIMTIHSPHGMDDISSPHLNSIRRITKNWAVKWERMQYMVQPHFFLCFSIAWPSFIQCFEAARNQIDNTMRRKNESSVQLLNYLLLLCVNVLY
Homology
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BLAST of CmaCh15G010030 vs. NCBI nr
Match: KAG6579300.1 (hypothetical protein SDJN03_23748, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-17
Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 17  LADAIIDFPIMTIHSPHGMDDISSPHLNSIRRITKNWAVKWERMQYM 64
           LADAIIDFPIMTIHSPHGMDDISSPHLN IRRI KNWAVKWERMQYM
Sbjct: 57  LADAIIDFPIMTIHSPHGMDDISSPHLNPIRRIIKNWAVKWERMQYM 103

The following BLAST results are available for this feature:
BLAST of CmaCh15G010030 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh15G010030 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh15G010030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579300.12.2e-1795.74hypothetical protein SDJN03_23748, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh15G010030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G010030.1CmaCh15G010030.1mRNA