CmaCh13G009170.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G009170.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Dynein light chain 1, cytoplasmic
Location	Cma_Chr13: 7314918 .. 7316742 (-)
Sequence length	1739
RNA-Seq Expression	CmaCh13G009170.1
Synteny	CmaCh13G009170.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATACCAAAATAATTAACTTATTATATATTTATTTATGTTGGATTACTGGATTTATTAGATGAAATGGTGTTATTGTATTAAACACACTCGTCTTTACTTAACCATCGTGGTTATTTCAAATTTCAACGACTTTTATTTTTAAAATTCAAAATTTCAAAATTTTACTTTAATACGAGACAACGGTTAGTATTTTCTTTATTAAAAAAAAGAAAAAGAAGAAAAACAAGTCTGGTCTGAGAGACAAAAAGCAGAAATGAATGATCGGTCAAACACGTCAGTCATCTAACGAACGTCACAGACCTCTCCTCGACGTCCACGTCAGGCGCACGTTAGAACTCAGCACAAAAATTTCACTATTCACTCGCACATACACAAGTCCCCATCAAAGGAATCCCTCATTTCTGACCCAAAAATGGCATCCCACCTCTCAAAATGCACAAATCCCCATAGTCTTCATCAACAATTTCCCCTTCTCCCACCCTTTTCCATTTCCCTTACAGGTCTCCCATGGCTAAACCCACCAACCAGCTGCGCATTTTAGCACCTCCTGACCCTGATTCTCCTCCCCTTAAACCTCCTTTCAGAGCTCCTCCCTCTGCTTCCATGGCTAACAATCACTCCACTCCTGCAAAACTTGATTCCGCCATAGCTGCTGCTTCTTCTCCTCCAAATCCCTCTCCTTTGTCCAACCACATCCCATTTTCCGAACTCCACAGACAACCTGGTTGTTTGTCTCAAAAACCAAAGAATTCTAACCCACCTCCATCTTTGACCGTTCCTACTATGGTCAAATCAAAACCCCACCTCCAGAAAATTGCTTCTGGTGGGGATGAGAAATTGAGTAAGCTGTGTAAAGAGATGGGCACTAAGAAGTTTTTTGATGAGAAGAAGGAAGCTAATAAAGGGGTTGATGACGATAGTAAAGCTCTCTATCTTGTGGTGAAGGAGAAGGAGAAGGAATTAAAAGAGCCTCAGAAGGGGCATGGTCTTCACACTTTGAGACCAACAGTTTCTTTACTTCGAAAGGATGGGAGAAGAAGGTCCCTTGCTGATCCCCAAGTTGAATTGGCTGATATTCTTGCAAAAAATGGCGTCAAAGTAGTCTCAGTCGACATGCCTCCGGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAAGCTCATGATAGCATGGAGAAATTCACTTCCAAGACTCTTGCTTTATCGCTCAAGAGGGTAATTAGCTTAACAGTTCTGTACAATCTGGAAACTTTTAGAATGAATTAGCTAATAATTTTGCTTGCTTGCTTGTGAATTTCCAGGAATTTGATAGCGTGTATGGTCCGGCCTGGCACTGCATCGTGGGAAAAAGTTTTGGGTCTTTTGTGACTCATTCAGTCGGCGGTTTCCTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCAGTACAAAGAGCTGATTGAAAATGAAGTAGATGTCCAAAACAGAGCTGGGAAATCCATTAAATTTGGCATAGTAGAGTTTAAGAAAGGTAAAAGAACCGTCCATCCGAATACTTGTACATTGATTATGATGAGCAACACACCAACAATACAAAATATTCAGTCATTGAGGTTGAGTGATAGAATAACTTCCAATCTGTTCTCTGGAGATCTCTTACAAGCTGTTTACTGAACAATTTTTATTGCAGTTCTTGAGGTTGAATGATAGAATAACCCTTTTGTTACAGCTCCAAGACCCAATTCTTTACATATTCTTCTCTCTATTCTCTACAAATATTGCAGACAATCATTTCAATGAATGAAAACATGTTCATATGCATGCCAGCG

mRNA sequence

ATATACCAAAATAATTAACTTATTATATATTTATTTATGTTGGATTACTGGATTTATTAGATGAAATGGTGTTATTGTATTAAACACACTCGTCTTTACTTAACCATCGTGGTTATTTCAAATTTCAACGACTTTTATTTTTAAAATTCAAAATTTCAAAATTTTACTTTAATACGAGACAACGGTTAGTATTTTCTTTATTAAAAAAAAGAAAAAGAAGAAAAACAAGTCTGGTCTGAGAGACAAAAAGCAGAAATGAATGATCGGTCAAACACGTCAGTCATCTAACGAACGTCACAGACCTCTCCTCGACGTCCACGTCAGGCGCACGTTAGAACTCAGCACAAAAATTTCACTATTCACTCGCACATACACAAGTCCCCATCAAAGGAATCCCTCATTTCTGACCCAAAAATGGCATCCCACCTCTCAAAATGCACAAATCCCCATAGTCTTCATCAACAATTTCCCCTTCTCCCACCCTTTTCCATTTCCCTTACAGGTCTCCCATGGCTAAACCCACCAACCAGCTGCGCATTTTAGCACCTCCTGACCCTGATTCTCCTCCCCTTAAACCTCCTTTCAGAGCTCCTCCCTCTGCTTCCATGGCTAACAATCACTCCACTCCTGCAAAACTTGATTCCGCCATAGCTGCTGCTTCTTCTCCTCCAAATCCCTCTCCTTTGTCCAACCACATCCCATTTTCCGAACTCCACAGACAACCTGGTTGTTTGTCTCAAAAACCAAAGAATTCTAACCCACCTCCATCTTTGACCGTTCCTACTATGGTCAAATCAAAACCCCACCTCCAGAAAATTGCTTCTGGTGGGGATGAGAAATTGAGTAAGCTGTGTAAAGAGATGGGCACTAAGAAGTTTTTTGATGAGAAGAAGGAAGCTAATAAAGGGGTTGATGACGATAGTAAAGCTCTCTATCTTGTGGTGAAGGAGAAGGAGAAGGAATTAAAAGAGCCTCAGAAGGGGCATGGTCTTCACACTTTGAGACCAACAGTTTCTTTACTTCGAAAGGATGGGAGAAGAAGGTCCCTTGCTGATCCCCAAGTTGAATTGGCTGATATTCTTGCAAAAAATGGCGTCAAAGTAGTCTCAGTCGACATGCCTCCGGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAAGCTCATGATAGCATGGAGAAATTCACTTCCAAGACTCTTGCTTTATCGCTCAAGAGGGAATTTGATAGCGTGTATGGTCCGGCCTGGCACTGCATCGTGGGAAAAAGTTTTGGGTCTTTTGTGACTCATTCAGTCGGCGGTTTCCTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCAGTACAAAGAGCTGATTGAAAATGAAGTAGATGTCCAAAACAGAGCTGGGAAATCCATTAAATTTGGCATAGTAGAGTTTAAGAAAGGTAAAAGAACCGTCCATCCGAATACTTGTACATTGATTATGATGAGCAACACACCAACAATACAAAATATTCAGTCATTGAGGTTGAGTGATAGAATAACTTCCAATCTGTTCTCTGGAGATCTCTTACAAGCTGTTTACTGAACAATTTTTATTGCAGTTCTTGAGGTTGAATGATAGAATAACCCTTTTGTTACAGCTCCAAGACCCAATTCTTTACATATTCTTCTCTCTATTCTCTACAAATATTGCAGACAATCATTTCAATGAATGAAAACATGTTCATATGCATGCCAGCG

Coding sequence (CDS)

ATGGCTAAACCCACCAACCAGCTGCGCATTTTAGCACCTCCTGACCCTGATTCTCCTCCCCTTAAACCTCCTTTCAGAGCTCCTCCCTCTGCTTCCATGGCTAACAATCACTCCACTCCTGCAAAACTTGATTCCGCCATAGCTGCTGCTTCTTCTCCTCCAAATCCCTCTCCTTTGTCCAACCACATCCCATTTTCCGAACTCCACAGACAACCTGGTTGTTTGTCTCAAAAACCAAAGAATTCTAACCCACCTCCATCTTTGACCGTTCCTACTATGGTCAAATCAAAACCCCACCTCCAGAAAATTGCTTCTGGTGGGGATGAGAAATTGAGTAAGCTGTGTAAAGAGATGGGCACTAAGAAGTTTTTTGATGAGAAGAAGGAAGCTAATAAAGGGGTTGATGACGATAGTAAAGCTCTCTATCTTGTGGTGAAGGAGAAGGAGAAGGAATTAAAAGAGCCTCAGAAGGGGCATGGTCTTCACACTTTGAGACCAACAGTTTCTTTACTTCGAAAGGATGGGAGAAGAAGGTCCCTTGCTGATCCCCAAGTTGAATTGGCTGATATTCTTGCAAAAAATGGCGTCAAAGTAGTCTCAGTCGACATGCCTCCGGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAAGCTCATGATAGCATGGAGAAATTCACTTCCAAGACTCTTGCTTTATCGCTCAAGAGGGAATTTGATAGCGTGTATGGTCCGGCCTGGCACTGCATCGTGGGAAAAAGTTTTGGGTCTTTTGTGACTCATTCAGTCGGCGGTTTCCTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCAGTACAAAGAGCTGATTGA

Protein sequence

MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLSNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGTKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD

Homology

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BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 198 VVSVDMPPAMQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDSVYGPAWHCIVGKSFGS 257
           + + DMP  MQ  AVDCA +A   +EKF   K +A  +K+EFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMPEDMQQDAVDCATQA---LEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 258 FVTHSVGGFLYFSMDQKLYILLFKT 282
           +VTH    F+YF + Q + +LLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAVLLFKS 88

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 196 VKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDSVYGPAWHCIVGKSFG 255
           + V + DMP  MQ  A +C  KA +  E    + +A+ +K+EFD  Y P WHCIVGKSFG
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 67

Query: 256 SFVTHSVGGFLYFSMDQKLYILLFK 281
           SFVTH    F+YF+++ K  +LLFK
Sbjct: 68  SFVTHETKNFIYFNIN-KHSVLLFK 89

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 198 VVSVDMPPAMQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDSVYGPAWHCIVGKSFGS 257
           + + DM   MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 258 FVTHSVGGFLYFSMDQKLYILLFKT 282
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 198 VVSVDMPPAMQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDSVYGPAWHCIVGKSFGS 257
           + + DM   MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 258 FVTHSVGGFLYFSMDQKLYILLFKT 282
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 198 VVSVDMPPAMQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDSVYGPAWHCIVGKSFGS 257
           + + DM   MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 258 FVTHSVGGFLYFSMDQKLYILLFKT 282
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL
Match: A0A6J1KET7 (uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.8e-157
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60

Query: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120
           NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT
Sbjct: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120

Query: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180
           KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180

Query: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240
           ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS
Sbjct: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240

Query: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL
Match: A0A6J1E7P6 (uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC111431561 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.5e-148
Identity = 276/288 (95.83%), Postives = 279/288 (96.88%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAS-SPPNPSPL 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAA+  PPNPSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMG 120
           SNHIPFS+LHRQ    SQKPKN NPPP LTV TMVKSKPHLQKIASGGDEKLSKLCKEMG
Sbjct: 61  SNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180
           TKKFFDEKKEANKGV+DDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS
Sbjct: 121 TKKFFDEKKEANKGVNDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180

Query: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240
           LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD
Sbjct: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240

Query: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL
Match: A0A5D3BH95 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003270 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 2.2e-112
Identity = 226/294 (76.87%), Postives = 242/294 (82.31%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60
           MAKPTNQ R LAPPD DSPPLKP FRA  SAS+ANNHST  KLDS+IAA    PNPS LS
Sbjct: 1   MAKPTNQQRSLAPPDHDSPPLKPIFRATSSASIANNHSTLLKLDSSIAAV---PNPSSLS 60

Query: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120
            HIPFS+LH Q G  SQ+ KN NPPP+ TV +M+KSKPHLQKI SGGDEK SK+C+E+G 
Sbjct: 61  THIPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGR 120

Query: 121 KKFFDEKKEANKGVDDDSKALYLVVKEK-------EKELKEPQKGHGLHTLRPTVSLLRK 180
           KKFFD+KKE N G   D K L LVVKEK       EKELKEPQKG  + +LRPTVSLLRK
Sbjct: 121 KKFFDDKKETNDGF--DKKGLCLVVKEKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRK 180

Query: 181 DGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALS 240
            GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALS
Sbjct: 181 SGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALS 240

Query: 241 LKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           LKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 LKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 289

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL
Match: A0A1S3AVF4 (uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 2.2e-112
Identity = 226/294 (76.87%), Postives = 242/294 (82.31%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60
           MAKPTNQ R LAPPD DSPPLKP FRA  SAS+ANNHST  KLDS+IAA    PNPS LS
Sbjct: 1   MAKPTNQQRSLAPPDHDSPPLKPIFRATSSASIANNHSTLLKLDSSIAAV---PNPSSLS 60

Query: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120
            HIPFS+LH Q G  SQ+ KN NPPP+ TV +M+KSKPHLQKI SGGDEK SK+C+E+G 
Sbjct: 61  THIPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGR 120

Query: 121 KKFFDEKKEANKGVDDDSKALYLVVKEK-------EKELKEPQKGHGLHTLRPTVSLLRK 180
           KKFFD+KKE N G   D K L LVVKEK       EKELKEPQKG  + +LRPTVSLLRK
Sbjct: 121 KKFFDDKKETNDGF--DKKGLCLVVKEKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRK 180

Query: 181 DGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALS 240
            GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALS
Sbjct: 181 SGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALS 240

Query: 241 LKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           LKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 LKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 289

[Close]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL
Match: A0A0A0LW58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.7e-109
Identity = 224/292 (76.71%), Postives = 241/292 (82.53%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPD-PDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPL 60
           MAKPTNQ R LAPPD  DSPPLKP FRA  SAS+ANNHS  +KLDS+IAA    PNPS L
Sbjct: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV---PNPSSL 60

Query: 61  SNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMG 120
           S HIPFS LH Q G  SQ+ KN NPPP+L+V +M+KSKPHLQKI SGGDEKLSK+C+E+G
Sbjct: 61  STHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELG 120

Query: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEK----EKELKEPQKGHGLHTLRPTVSLLRKDG 180
            KKFF EKKE N G   D K L LVVK+K    EKELKEPQK   + +LRPTVSLLRK G
Sbjct: 121 RKKFFYEKKETNDGF--DKKGLCLVVKQKEEKEEKELKEPQKEQKIVSLRPTVSLLRKSG 180

Query: 181 RRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLK 240
           RR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLK
Sbjct: 181 RRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLK 240

Query: 241 REFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           REFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 REFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CmaCh13G009170.1 vs. NCBI nr
Match: XP_023000852.1 (uncharacterized protein LOC111495174 [Cucurbita maxima])

HSP 1 Score: 563.9 bits (1452), Expect = 7.8e-157
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60

Query: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120
           NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT
Sbjct: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120

Query: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180
           KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180

Query: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240
           ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS
Sbjct: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240

Query: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CmaCh13G009170.1 vs. NCBI nr
Match: KAG7019845.1 (hypothetical protein SDJN02_18810, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 545.8 bits (1405), Expect = 2.2e-151
Identity = 281/289 (97.23%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAS--SPPNPSP 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAA+   PPNPSP
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPPNPSP 60

Query: 61  LSNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEM 120
           LSNHIPFS+LHRQPG  SQKPKNSNPPP LTVPTMVKSKPHLQKIASGGDEKLSKLCKEM
Sbjct: 61  LSNHIPFSKLHRQPGFSSQKPKNSNPPPPLTVPTMVKSKPHLQKIASGGDEKLSKLCKEM 120

Query: 121 GTKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR 180
           GTKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR
Sbjct: 121 GTKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR 180

Query: 181 SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREF 240
           SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREF
Sbjct: 181 SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREF 240

Query: 241 DSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           DSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 DSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 289

[Close]

BLAST of CmaCh13G009170.1 vs. NCBI nr
Match: XP_023520376.1 (uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 544.7 bits (1402), Expect = 4.9e-151
Identity = 279/287 (97.21%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAS PPNPSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASPPPNPSPLS 60

Query: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120
           NHIPFS+LHRQPG  SQKPKNSNPPP+LTV  MVKSKPHLQKIASG DEKLSKLCKEMGT
Sbjct: 61  NHIPFSKLHRQPGFSSQKPKNSNPPPALTVSAMVKSKPHLQKIASGEDEKLSKLCKEMGT 120

Query: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180
           KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRSL 180

Query: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240
           ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS
Sbjct: 181 ADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDS 240

Query: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 VYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CmaCh13G009170.1 vs. NCBI nr
Match: KAG6584250.1 (hypothetical protein SDJN03_20182, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.3 bits (1383), Expect = 7.8e-149
Identity = 278/288 (96.53%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAS-SPPNPSPL 60
           MAKPTNQLRILAPPDPDSP LKPPFRAPPSASMANNHSTPAKLDSAIAAA+  PPNPSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPLLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMG 120
           SNHIPFS+LHRQPG  SQKPKN NPPP LTV TMVKSKPHLQKIASGGDEKLSKLCKEMG
Sbjct: 61  SNHIPFSKLHRQPGFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180
           TKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS
Sbjct: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180

Query: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240
           LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD
Sbjct: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240

Query: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288

[Close]

BLAST of CmaCh13G009170.1 vs. NCBI nr
Match: XP_022924012.1 (uncharacterized protein LOC111431561 [Cucurbita moschata])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 276/288 (95.83%), Postives = 279/288 (96.88%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAS-SPPNPSPL 60
           MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAA+  PPNPSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMG 120
           SNHIPFS+LHRQ    SQKPKN NPPP LTV TMVKSKPHLQKIASGGDEKLSKLCKEMG
Sbjct: 61  SNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180
           TKKFFDEKKEANKGV+DDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS
Sbjct: 121 TKKFFDEKKEANKGVNDDSKALYLVVKEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRRS 180

Query: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240
           LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD
Sbjct: 181 LADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFD 240

Query: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD
Sbjct: 241 SVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288

[Close]

BLAST of CmaCh13G009170.1 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.7e-29
Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 196 VKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDSVYGPAWHCIVGKSFG 255
           V++++ DMP  MQ HA  CAR   DS+EKF+SK +A +LK+EFD  YGPAWHCIVG SFG
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFG 176

Query: 256 SFVTHSVGGFLYFSMDQKLYILLFKTSVQRA 287
           SFVTHS G F+YFSMD KLY+LLFKT V+ A
Sbjct: 177 SFVTHSTGCFIYFSMD-KLYVLLFKTKVRPA 206

[Close]

BLAST of CmaCh13G009170.1 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.6e-21
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 196 VKVVSVDMPPAMQIHAVDCARKAHDSME-KFTSKTLALSLKREFDSVYGPAWHCIVGKSF 255
           V+V + DMP   Q  A   +R+  ++   K  +K LA +LK++FDS YGPAWHCIVG SF
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 256 GSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288
           GS+VTHS GGFLYF +D K+Y+LLFKT+V+  D
Sbjct: 96  GSYVTHSTGGFLYFQID-KVYVLLFKTAVEPLD 127

[Close]

BLAST of CmaCh13G009170.1 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 174 DGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFT-SKTLAL 233
           D RR SL  P+VE +    K  V + S DM   MQ  A++ A  A    EK++  K +A 
Sbjct: 21  DDRRSSL--PEVEASPPAGKRAV-IKSADMKDDMQKEAIEIAISA---FEKYSVEKDIAE 80

Query: 234 SLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKT 282
           ++K+EFD  +G  WHCIVG++FGS+VTH    F+YF +DQK  +LLFK+
Sbjct: 81  NIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKA-VLLFKS 122

[Close]

BLAST of CmaCh13G009170.1 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-13
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 202 DMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDSVYGPAWHCIVGKSFGSFVTHS 261
           DMP  MQ+ A+  A +A D  + F  K++A  +K+EFD  YG  W C+VG +FG F THS
Sbjct: 12  DMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNFGCFFTHS 71

Query: 262 VGGFLYFSMDQKLYILLFK 281
            G F+YF + + L  L+FK
Sbjct: 72  KGTFIYFQL-ETLKFLIFK 89

[Close]

BLAST of CmaCh13G009170.1 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 197 KVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDSVYGPAWHCIVGKSFGS 256
           KV   DMP  MQ+ A+  A ++ D  + F S ++A  +K+EFD  YG  W C+VG +FG 
Sbjct: 7   KVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGC 66

Query: 257 FVTHSVGGFLYFSMDQKLYILLFK 281
           F THS G F+YF +   L  L+FK
Sbjct: 67  FFTHSKGTFIYFHLG-TLNFLIFK 89

The following BLAST results are available for this feature:

BLAST of CmaCh13G009170.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	1.5e-14	49.41	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q86A88	2.0e-14	48.24	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
Q3MHR3	1.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	1.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	1.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]

BLAST of CmaCh13G009170.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KET7	3.8e-157	100.00	uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174...	[more]
A0A6J1E7P6	5.5e-148	95.83	uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A5D3BH95	2.2e-112	76.87	Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AVF4	2.2e-112	76.87	uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=...	[more]
A0A0A0LW58	1.7e-109	76.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1	[more]

BLAST of CmaCh13G009170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000852.1	7.8e-157	100.00	uncharacterized protein LOC111495174 [Cucurbita maxima]	[more]
KAG7019845.1	2.2e-151	97.23	hypothetical protein SDJN02_18810, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023520376.1	4.9e-151	97.21	uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo]	[more]
KAG6584250.1	7.8e-149	96.53	hypothetical protein SDJN03_20182, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924012.1	1.1e-147	95.83	uncharacterized protein LOC111431561 [Cucurbita moschata]	[more]

BLAST of CmaCh13G009170.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	8.7e-29	65.93	Dynein light chain type 1 family protein	[more]
AT1G23220.1	6.6e-21	54.84	Dynein light chain type 1 family protein	[more]
AT4G15930.1	1.1e-15	44.95	Dynein light chain type 1 family protein	[more]
AT1G52240.2	3.0e-13	45.57	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	3.0e-13	44.05	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 191..281 e-value: 5.3E-38 score: 142.2
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 196..281 e-value: 7.9E-29 score: 99.9
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 53..287
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 189..282 e-value: 5.3E-31 score: 108.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 194..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..64
None	No IPR available	PANTHER	PTHR11886:SF80	INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE	coord: 53..287

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh13G009170	CmaCh13G009170	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G009170.1:exon:3940	CmaCh13G009170.1:exon:3940	exon
CmaCh13G009170.1:exon:3939	CmaCh13G009170.1:exon:3939	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G009170.1:three_prime_utr	CmaCh13G009170.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G009170.1:cds	CmaCh13G009170.1:cds_2	CDS
CmaCh13G009170.1:cds	CmaCh13G009170.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G009170.1:five_prime_utr	CmaCh13G009170.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh13G009170.1	CmaCh13G009170.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding