CmaCh13G003080.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G003080.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	exopolygalacturonase-like
Location	Cma_Chr13: 3282907 .. 3291711 (+)
Sequence length	735
RNA-Seq Expression	CmaCh13G003080.1
Synteny	CmaCh13G003080.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGGTTTGGTAGAAATTGTTGATTAAACCAACTTCCAAAAAGCGGATTGTGAGTATTGACCCTAATCCCATATTTAATCCCATATTTAATCCCATATTTAATACCAATTTAATCCCAAATTCATGAAATTAACAATTCAATTTCTACCGTAACCATCTATACTTCCATCCCTCATGCCTTCAATATTATTCCTGGTATGAGAAATTTAAACCTATTCATGTAATTTTGAAGTTTACCAATCAAATAATTACTTAAATTGATGCTAAATAAGATGTCTTAATCGTGTCATACATGATTTAGATTTAAAAATGTTTTATTATAATTTTTTTAAGATTTAAATAAATGTCTTTAAATTACCAGTGATAAGGGGTCATTATGTGTTGTTGGCTATAAAAGTTAGAATCTTTCTATTAAAACATAAGTTATTATAAATTTTATTTCTAAGGATAGAAATAGTTATTCATGTTATGCTTATATCACATTTTGGAATTAAAAAAAATAGGGTTTCTATTTTAGTTTTGTTGATAGCTAAGTTTTTACTTTCCAAATTCTTGTGTTTATTATAATTTGCATACTAGAGTCATTCAAGTGTTATTGATTAAACCTCTTTGTGGAGTGATTCGAATCACGAGTTTAGAAACGTATTTTCTTTGCTCTTGATCTTGATCATCAAGGTAATCTGATAAGATAAGGAACCACTACAAGAGGAGTAAGAACATTGTTTGAGATTCGAATCACTCCACAAACAAGATCGATCATGTCTAGTTTGAATGATTCTTGTTGATCAAATATCTCAAACACTTGTTTGAGATTCGAATCACTCCACAAGTAAGATTGATCATGTCGAGCTTGAATGATTCTGCATGCAACCTTAACTACATAGAATTGCAAATAAACTTAGTCATTGGCTAAAGAAAGCACAAATGCTCATTATATATATATTTTCCAAGTCTACTCACAAATACAGCATACATGTCTTTATATAGCCTCAAAATGAAACTATTAAAGGCATTCCAAGAGTTGTAACATTCATACTTAATGGTCATAATTAACCGTTATATAATTGTAACCTAAAGTAAATAAAAAGTTTTAAAATACATTGATGAAATACAATAACTCTAAATTGTAATCCACCCAAAATTTATAACATGAAATTCATTCTTCTTCAATGTGGCATGAATTGAAATATCTTTTGATAATTTCAACAATATTTTATTCACATCTTTGTTGAAGCATATTGTGTGATTGATGTCTCTTGGTTCATATCATAATCAATTCCAAAACTTTCCTTTGAGTTGATTCCATATCATTTAGTATCAGAGCTTCAGGCTAAAGATCGGATATATGTTTCCTTTGTGTTTTTTCTTAATTTGATTTTTCTTTATTTTTATCTTTTTAGTTTCTAATCGACTTAGAGTTTAAAATCCAATCTCGACTCTATTGAAAATTTTGAAAGGTGAGAATGAGAGTTTCATATGTGTGAATGAGTACAAGCAGGGTGGCCTAAAAATTCCTTGAGTGTATACACGTGAGAGTGTTTTGAGGTCCTTTATATTTTCATAACTTATTTTTTGTAGCATATTTCACAAATAGATTCGAAGACTAATCCTCTTGAATAATTGGAGAATGACATGAACCAAGAGATATTATACTTCAATGAAGATGTAAAGAAAATGGTGTCAAAATTATCCAAAGATGATTAAATGTGACAAAGAGGAATCAAGTTTTATGGTTATAAATGTTGGGTAAATCATAATTTTGAGTTATAGTGTTTATTTAATGTATTTTAAGGCTTATTTACATATAAGTTAATTATGGCCCTAAGATATAATAGTGACTCATTATGGTCGTGAAATATAGTTACAACTTTTGACTGATGAAGGTTAAGAGTGGTTGTTTTGAGGCTCTATAAAGCCATGTTATATTTCTAAGATGGGACTTGAAAAATGTAGTAAATTAGGGTTATTTTTTTTTTTTTTAAGCAAATGCTAAGTTTCTTTGCAATTATATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTAGATATGATCGATCTTGGTTGTGGAGTGATTCAAATCTCAAACAAGTGTTCTTTCATTGAGATATTCGATTAAAAGGTAATCCCCTTACTCCCCTTGTAGTGATTTCCATATCATTTGGTATCAGAGCTCTAGACTCAAGGTCGGATATATACTTCCTTACGTTTATCTCTTTAATGCTCGTATAATTTTTTTTTCTAGTTTGTGTAGAATGTTCCTATTCTATCTCAAAACTTATAAAAAAAAAAAAAAAAAAAATTGTTTCTGAAGTGTTAGATATGTATCTTATCAACATTTTGTTCTTCTTTAATATTTTCTAAATCTAACCTTCTTTTTGGTACATTGATGGTAAATGAAGACAACCTCTATCAATTTGAATCTCAGTCTTTTAAGGTTTTTTTTTGTTGTATTTTTCCAAATAAATAAGATGGTCGTATGTTTGAAGGAGACTCTGTGTCGTGAACAATGTAATGTTTTTAGTACCTTGACGTTATAAAATAAAATGCTTTCACTCTTATCTATATTTTTCAGTGAGTAGTATCCTTAAATTCAGTGAGTAGTATCCTTAAATCTATATTTTTCGTCAATGGTGTACATTCGATTATATTGCAATTTTTAGATCGTCTTGAAAAACATAGAATTTTAGATTAGAAAATTAAGTGACAAGTATTTGATGGTGTTAATATAACATGTGGAAGCAATTTGGATCTTAGGCACTCTAAGTACATCAATTATAGTGAATTAGCTAGCATGTTCAAAAACATTAAAACTCAATGGGTTTGAATACTAACCTTTTGTAGCTCAAGTTTCTTTTTCCTCACTAGTGTCTTCTCCACTATTCTCCGGCCTTAGAACGGGATTGTGGAATCCGGTGAGTGACTAAACTTGGGAGGGATTTAGTATATATGAAGAGAGAGTTTGTGAGAGGTTTTTCTCAAGGTTTTTTCCCTTGAGCAACCTTCCATTTACCATGATCACTCTATTTATAGAGTCATGTTTGCATGTTCATGCAAATTTGAGATCACCAAATTTTGACACTCAAAATTCCACTCAAATGTTTGGGATTACGTGGCAAACATGCATGCTTAAGTTAACCAAATTTTGACACTCAAAATTTCACTCAAATTTATGAGGTTTATTTGGCAAGCATGCAAGTTTGGTTAAACCAAATTTTGACACCTCAAAATTCCACTAACATGGATTTTTCCATTAAATGAATTCAACATTGTGACTTTCTTCATTTTGATTCAACAATCCATTTGAATTATGAATTCCAAATTAAAGTAATATTAAATGATTAATTAAGCTATTTAATTAATATTTAATATTAATTCAAATGTCAATCCCAATTAATTCCGACACATATTTGATTAAGATATTTAAATCTTATTTAAATATCTCAGATTCTCTCTTTTTGTTTAATTCGTAAATAGAACATATAGTCCTTCATTATCCTAAGATACTTGAGCATATTCTTAACGACAGTCCAATGAGCACGTCCCGGATCGGACTGATATCTGCTGAAAATTCCCACAGCATAACATATGTCGGGTCGGGTACATAGCATGGCATACATTAGACTACCGACTACTGATGCATAGGGAATGTGTCTCATATCCTCAACTTCTTGAGGTGTCTTAGGACTTTGTTCCTTTGACAAATGAACTCCATGCCTGAAAGGTAATAATCATTTCTTGGAGTCCTGCATCTTATATCGAATCAACATTTTGTCGATGTACGATGCCTGAGACAATGCTAGTGTTTTGTTCTTGCAACTCCGAACAATTTGGATTCCAAGAACAAACTGAGCCTCTCTCAAATCTTTCATTTGGAATTGTATCGCTAGCCAATACTTAATGTCAGTCAAAAATTCCACATCATTCCCAATGAGTAGAATATCGTCAACGTATAACACCAGGAATGCTACTGTAGAGTTGACTATCCTTTTATAAATACAAGGTTCGTCAACATTCTGTTTAAAGCCATAAGATTTGATCGCAGTATCAAACTTTATATTCCAGGATCGAGATGCTTGCTTCAACCCATAAATGGATCTTTTAAGCTTGTAAACTCTTTGCTTGTGATCCTATTCAATGAACCCCTCTGGTTGAGTCATATAGATACTCTCTTCAAGATTGCCATTTATAAAGACTGTCTTAACATCCATTTCCCAAATTTCATAATCATAAAATGTGGCAATAGACAAGAGTATTCTAATCGGTTTAAGCATAGCAACAAGAGAGAAGGTTTCTTCATAGTCCACCCCCTCTCTTTGGGTATAACCCTTTGCTACAAGTCGAACTTTTAAGGTCTGTACCTTGTCAGTTTGGTCTTGTTTCCTCTTATAGATCCATTTGCAACCAATAGGTTTTACCCCATCTGGTTGATCTACAAGTTCCCAGACTAAATTGAAGTACATTGACTCCATTTCAAGATTCATGGCTTTGATCCACTGATCTCTATCTTCATCATTCATTGCCTGTTTATAGGTCAATGGATCCTCAATGCCATTATTAGGTATGATGACTTGAGTTTCTGCCAAACCCAAGTAACGATCGGGTTGAGTTATAACCCTCCCACTACGTCGAGGTATTCTCAACTCTTGAGAAGGATGTGATTGACTAGAAGTGTCAGCTCCATCAACAACTCTTGTTGAAGGACCAGCTTGATCAACAACTCTGGTTGTTTTATCAGTAGCTTCTTTAGAAATCTCATTTAATACTAGTTTGTTGCGAGGTTGATGATTTCTTACGTGGTCTTCCTCTAAGAATGTAGCATTTGTTGATACAAACACTCTATTTTCTTGAGGGTCATAAAACAAACCACCTTTCGTCTCTTTGGGGTATCCTACAAATAGATATAATTTTATACGACGTTCTAATTTCTTGGGGTTTTGCAACAACACATGTGCTGGACATTCCTAAATCCTGAAGTGACGTAAACTACCTTTACGCCTTTTCCATAACTCATAAGGTGTTTCTTAAACACTCTTAGTCGGAACCATGTTTAAAATGTATGTAGCAGTCTCCACTGCATATCCCCAAAACGGATCGGGTAATTGAGTGAAGCTCATCATAGACCGAATCATGTCTAACAGAGTTCTATTTCTCCTTTCTGATACACTATTTTGTTGAGGCATACCAGGGGCTGAGAGTTGAGACTTTATTCCATATTCTATCATATAGTCCTGAAATCTTAAGTCCATATACTCTCCTCCTCGATCTGATCGAAGTGTTTTAATAGTTTTACCTAATAGATTTTCAACCTCAGTCTTATACTCTCTGAATTTTTCAAGAGCTTCGGACTTGTGATGCATTAGGTAAAGATTGTCATACCTTGAATAATCATCAATAAAACTGATGAAATATTCGTACCCTCCTCGTGCTTTGACATTTATTTGACCACAGAGATCTATATGCACGAGTTCTAAGATTTCTTTAGCTCTATAACCTTTTTCGGAAAACGGTCATTTAGTCATTTTACCCTCAAGACAAGACTCACATGGAGGTAAAGAGTTGTCTTCTAACTCATTTAGAAGTTCTCTTTTACCAATCTCTCAATCCTATTGAGATTAATGTGGTCTAGTCTTAAGTGCGAAAGATAGGTATTAGGAGAAATCTTTTGTCGTTTATTTTGAGTTTCAACTGTTTTAAACATCTCGATATTTAAAATAATTTTTGTTTCGCTCGGTTTTAACATATATAAGTTGTTTTCTAGTTTTGCATAACAAATATGAATATCTCTTTTATAAATGAACACTTCATTGATTTCAAAAGATACTTTATACAATTGTTCTACTAAATAAGAGATAGATATTAGATTTCTTTTCATTTCAGGAACAAAAAGTACATTCTCTAATATAATTAACTTATCTCCAAAAAAAAACAACTTTAAAGTTCCTACTGATCTTGCTGAGACAACCTCTCCTGTTCCAACCCTAAGTGTTATCTCGCCGTCCGTAAGCATTCTCCAGGAGCTAGTTTCCTGGTAAAAAGAACAAATATGATTAGTCGCCCCTGAATCTAGTATCCAAGTTGAGTTGTCATAGTCTACTAAACATATTTCTACAACAAGTAAATCATATTTACCTTGTTGTGTCTTTTAGTTTTAGGAAAAATGTTGATAATCTAAGAAAAATTAAATATCAAAAGAAGCGAAATGTTCTAGGAGATTACTAGACTAGAACTTATTGAAATTGTCCAAAATCTGAGGTAATTAAGGCCAAGAAACGACAAACACCAGCAAAAGAGAGAAAATAAAACAAAACTCGGTCTTAATTGATGATGCTCTGTTTTGTGTTTTCAAGTCTTAAGATATTGGTTGCTCGCGAGTTGAGCTTGGTTGTGTTGAGATATTTTTTTTAGATTTAACTCAATTATTTGTATCATAAATTTATTCAACCCAAGCAACCCTTGTTAAATAATTAAATCTTTTGATTTTTATGTTTATAGTATGATATATAAGAAGAAAAGTGGATACGAAGCTTTTTGGAAATGGCAAATGGTGCCCCATGTTGAAGCTTTGGACCGGAATTTGAAATTTGGATCCAGCAACTGATTCCCTTGACATTCCTCTCCATCAATGTGATGTGGCTACATTTCCAACTTGTCATAAATTGCTTCTAAGAGAGAAAACTATCCTCACAAATCAACACGGTTCATTTTAGCAGTCTTTTTCCTTACTCAGATGTCTCCTAAGATGTAACTTCATACCTAGAATTTGGACCCGAATTTGTAATCCAAATTTGGCACCCGATGGCCCTCACAATCCCTTTGCATCTTCAATGATATGGTCATATTATTTACTTGTTTTGAATTGCCTCTAAGAATGAAAAGTATACCTAAAAATCACATTACCTATTTTTGGTGGCTCAATCATAAAATTCAAAAGTTAAGAGGGTTTAGTTTAGAGCAATCTTATGTTAGGGGACCACTTGAAAATTTCTTAATAATCAATTGAGTAAAGACAAAGTATGCTAAAAATATTTCATTGGAGTTTGAAAAATAGTTTGAAATTTCTTCCCCTCCACCCATAAAAGTTTTCTAACATTGAAATTAATGTATACTCAAGTGCATCTTGTAATAGAAACTTCATTTGTACAAGGCTACCATTAATTTGTGGCTGTAAAGCTTGTTTCCTTCCGAGAAAAGTACTTCGTTGGGTTTGGCCAATGCCTAGTTTCTTTGAGATTCAACTGTTCATTGGCAAGTGAGAGAGGTATTGAAACACAACCATTAATGAACAACTTAGCGAAACAATAAACAACATTAAGTTATCAATTATGTTTGGATTAAGAGAGGGAGATGGAACCATAACTTTTGATAGTTCCATCCCAACTTGATTTCTATTCTTCAATTGGCATTATTAAATACATAAAGGTTCCAAATCTAAAATGAAATATCATTGTCTCTCACTAGTATTCAAGCAATATACATAACAAAAGAAAAGGAAGCAAGGGCATCATGAGTACGATCAAATCGAGTTTCTTGGTTGCTACAATCTTGACGCTATTATTGTTAGATTTTACCGTTGATACTCAATCTAGTGCCGATGTTGTTTTTCCTTTGAAAAGATATGGTAACATAGTGCTTCGTACTGACATCACAAAGGTAAATATACAGTATGAACATCAATATTATCACTCGTTGAGTTGATCAATTGTTTGCTAATTTTTGTTACTTGTGACATGTAGGCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTTAGGGAGATAATTGGATTGCTTTTGAACATATTGATAGATTGACATTGTCAGGTGAATGAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTGTAAGCAATATGCCTTCAGCTTTCCTTCTCAATCTCGTGCATCTTGTTGTTTTTAGATGTCTTCTCTAATCTTCTAACATTTATAATTTGGTAAGCGTTCTTTATTTTCTAGAGGATAATCTTTAACCATTGTAACAAAAAAAAAAAAAAAAAAATGTAAAGAAGTGAAATTCTTTTCTGAGTTTTCGATTTTATTGGGTTCTGTTAAAATTTTTGGCTTCATTACTGACGCTCACAAAATATTATTTGATTATACAAACTGTTTAGAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

mRNA sequence

ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAATTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

Coding sequence (CDS)

ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAATTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

Protein sequence

METQNNARLGIDFMILLHGLGSDFAGNANSESLAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPKIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV

Homology

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BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-52
Identity = 108/213 (50.70%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +  AWK+AC S   S I++P G F V     + PC S I  QL GTL+AP          
Sbjct: 6   LTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG 65

Query: 118 ----------------IFDGQGKAAWKKNDRHKR-INCDQLPISLRFNFNTNSIVKRITS 177
                           +FDGQGK+AW +ND HK    C  L ++LR    TNSI++ +T+
Sbjct: 66  WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTT 125

Query: 178 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 237
           LDSKNFH+NV+GC NLTF    I+A E S NTDGIHIGRS+ + I  ++I TG DCISLG
Sbjct: 126 LDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLG 185

Query: 238 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DGSK INITN+TCGPGHGIS+ SLG+Y NE  V
Sbjct: 186 DGSKNINITNITCGPGHGISVGSLGRYKNEESV 218

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BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 96/210 (45.71%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 60  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK----------- 119
           +AWK+AC S   S +VIP G + + +   + PC +PI+  + GT+QAP            
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 120 --------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDS 179
                         IFDGQG  A++KN    R    +LP+++RF+F TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDS 170

Query: 180 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGS 239
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TG DCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 240 KQINITNVTCGPGHGISIESLGKYTNEVPV 245
           K + I  +TCGPGHGISI SLGK+ NE PV
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPV 260

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BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 96/210 (45.71%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 60  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK----------- 119
           +AWK+AC S   S +VIP G + + +   + PC +PI+  + GT+QAP            
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 120 --------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDS 179
                         IFDGQG  A++KN    R    +LP+++RF+F TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDS 170

Query: 180 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGS 239
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TG DCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 240 KQINITNVTCGPGHGISIESLGKYTNEVPV 245
           K + I  +TCGPGHGISI SLGK+ NE PV
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPV 260

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BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-47
Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGT-------------- 117
           +  A+  AC +   S ++IP G FK+ E +   PC SPI+F L G               
Sbjct: 39  VLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRW 98

Query: 118 ----------LQAPKIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLD 177
                     L     FDG+G AAWK N+ HK   C +LPIS+RF+F  N+ +K +TSLD
Sbjct: 99  VVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLD 158

Query: 178 SKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDG 237
           +KNFH NV+   N+TF NI I AP  SPNTDGIH+GR   + I  +KIATG DCIS+GDG
Sbjct: 159 AKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDG 218

Query: 238 SKQINITNVTCGPGHGISIESLGKY 239
            K + I  V CGPGHGIS+ SLG+Y
Sbjct: 219 MKNLLIEKVVCGPGHGISVGSLGRY 243

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BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-47
Identity = 98/213 (46.01%), Postives = 125/213 (58.69%), Query Frame = 0


Query: 59  ANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP----------- 118
           A AWK+AC +   S I +P G + V+   FK PC  P+  +L G  +AP           
Sbjct: 90  AAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAG 149

Query: 119 ----------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITS 178
                            IFDGQG  AWK ND  K   C+ LPI++RF   TNS +  ITS
Sbjct: 150 WIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITS 209

Query: 179 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 238
            +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TG DC+S+G
Sbjct: 210 TNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIG 269

Query: 239 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DG++ + + NV CGPGHGISI SLG+Y NE PV
Sbjct: 270 DGTENLIVENVECGPGHGISIGSLGRYPNEQPV 300

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BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL
Match: A0A6J1EWD3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL
Match: A0A6J1EHA1 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL
Match: A0A6J1F4C6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL
Match: A0A6J1EHN0 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.9e-94
Identity = 176/209 (84.21%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 2   LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 61

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 62  FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 121

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 122 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 181

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHG+SI SLG+YTNE PV
Sbjct: 182 QINITNVTCGPGHGVSIGSLGRYTNEEPV 210

[Close]

BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL
Match: A0A6J1F1K6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.6e-94
Identity = 176/209 (84.21%), Postives = 179/209 (85.65%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLP SLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. NCBI nr
Match: XP_022927477.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. NCBI nr
Match: XP_022932204.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. NCBI nr
Match: XP_022933298.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. NCBI nr
Match: XP_022927431.1 (exopolygalacturonase-like, partial [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 8.0e-94
Identity = 176/209 (84.21%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 2   LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 61

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 62  FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 121

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 122 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 181

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHG+SI SLG+YTNE PV
Sbjct: 182 QINITNVTCGPGHGVSIGSLGRYTNEEPV 210

[Close]

BLAST of CmaCh13G003080.1 vs. NCBI nr
Match: XP_022932205.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 176/209 (84.21%), Postives = 179/209 (85.65%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLP SLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]

BLAST of CmaCh13G003080.1 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-52
Identity = 105/236 (44.49%), Postives = 146/236 (61.86%), Query Frame = 0


Query: 33  LAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPC 92
           ++ N ++  I S+ G  I +     +  A+  AC S+  S +VIP G FK+ E   + PC
Sbjct: 18  ISANAEVFTIGSSSGSDITQ----ALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPC 77

Query: 93  NSPIDFQLGGTLQAP------------------------KIFDGQGKAAWKKNDRHKRIN 152
            +PI+  L GT++A                           FDG+G AAW+ N+ HK   
Sbjct: 78  KAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFE 137

Query: 153 CDQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHI 212
           C +LPIS+RF+F  NS ++ I+S+D+KNFHINVLG  N+T +NI I APE+SPNTDGIH+
Sbjct: 138 CKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHL 197

Query: 213 GRSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           GRS+ + I  S I+TG DCIS+GDG K +++  VTCGPGHGIS+ SLG+Y +E  V
Sbjct: 198 GRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 249

[Close]

BLAST of CmaCh13G003080.1 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 3.1e-51
Identity = 98/211 (46.45%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP---------- 117
           +  A+  AC +  +S +VI  G FK+ E     PC +P++  L GTL+A           
Sbjct: 40  LLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERW 99

Query: 118 --------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLD 177
                          IFDG+G AAW+ N+ HK   C +LPIS+RF+F  N+ ++ I+S+D
Sbjct: 100 VVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSID 159

Query: 178 SKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDG 237
           +KNFHINVLG  N+TF N+ + AP  SPNTDGIH+GRS  + I  SKIATG DCIS+GDG
Sbjct: 160 AKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDG 219

Query: 238 SKQINITNVTCGPGHGISIESLGKYTNEVPV 245
            K +++ NV CGPGHGIS+ SLG+Y +E  V
Sbjct: 220 MKNLHVENVMCGPGHGISVGSLGRYVHEQDV 250

[Close]

BLAST of CmaCh13G003080.1 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-51
Identity = 103/232 (44.40%), Postives = 142/232 (61.21%), Query Frame = 0


Query: 33  LAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPC 92
           L+ N KI  I S  G  I       +  A+ +AC     S ++IP G +K+ E +   PC
Sbjct: 19  LSANAKIFNINSPPGSDITN----ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPC 78

Query: 93  NSPIDFQLGGTLQAP-----------------------KIFDGQGKAAWKKNDRHKRINC 152
            +PI   L GT++A                         +FDG+G AAW+ N+ HK  NC
Sbjct: 79  KAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNC 138

Query: 153 DQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIG 212
            +LPIS+RF+F T++ ++ ITSLD+K+FHINV+G  N+TF ++ I AP  SPNTDGIH+G
Sbjct: 139 KKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVG 198

Query: 213 RSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNE 242
           RS+ I I  S I+TG DC+S+GDG K + +  VTCGPGHGISI SLG+Y++E
Sbjct: 199 RSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHE 246

[Close]

BLAST of CmaCh13G003080.1 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 5.8e-50
Identity = 99/232 (42.67%), Postives = 140/232 (60.34%), Query Frame = 0


Query: 37  YKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPI 96
           +++L++ S+ G  I +     +  A+  AC S     +VIP G FK+ E +   PC SP+
Sbjct: 23  HEVLRLTSSPGSDITQ----ALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPV 82

Query: 97  DFQLGGT------------------------LQAPKIFDGQGKAAWKKNDRHKRINCDQL 156
           +  L GT                        L     FDG+G AAW+ N+ HK   C +L
Sbjct: 83  EITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKL 142

Query: 157 PISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSN 216
           PIS+RF+F TN+ ++ I+S+D+KNFHINV+G  N+TF N+ I AP  SPNTDGIH+GRS 
Sbjct: 143 PISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSV 202

Query: 217 RIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
            ++I  S+I+TG DC+S+GDG   + + NV CGPGHGIS+ SLG+Y +E  V
Sbjct: 203 GVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDV 250

[Close]

BLAST of CmaCh13G003080.1 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 98/213 (46.01%), Postives = 125/213 (58.69%), Query Frame = 0


Query: 59  ANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP----------- 118
           A AWK+AC +   S I +P G + V+   FK PC  P+  +L G  +AP           
Sbjct: 90  AAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAG 149

Query: 119 ----------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITS 178
                            IFDGQG  AWK ND  K   C+ LPI++RF   TNS +  ITS
Sbjct: 150 WIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITS 209

Query: 179 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 238
            +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TG DC+S+G
Sbjct: 210 TNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIG 269

Query: 239 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DG++ + + NV CGPGHGISI SLG+Y NE PV
Sbjct: 270 DGTENLIVENVECGPGHGISIGSLGRYPNEQPV 300

The following BLAST results are available for this feature:

BLAST of CmaCh13G003080.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	4.6e-52	50.70	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q39766	3.1e-48	45.71	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	3.1e-48	45.71	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
P35337	1.2e-47	46.83	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
P49063	2.0e-47	46.01	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of CmaCh13G003080.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWD3	3.0e-94	84.69	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=...	[more]
A0A6J1EHA1	3.0e-94	84.69	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=...	[more]
A0A6J1F4C6	3.0e-94	84.69	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=...	[more]
A0A6J1EHN0	3.9e-94	84.21	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=...	[more]
A0A6J1F1K6	8.6e-94	84.21	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=...	[more]

BLAST of CmaCh13G003080.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927477.1	6.1e-94	84.69	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022932204.1	6.1e-94	84.69	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022933298.1	6.1e-94	84.69	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022927431.1	8.0e-94	84.21	exopolygalacturonase-like, partial [Cucurbita moschata]	[more]
XP_022932205.1	1.8e-93	84.21	exopolygalacturonase-like [Cucurbita moschata]	[more]

BLAST of CmaCh13G003080.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	3.6e-52	44.49	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	3.1e-51	46.45	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	6.8e-51	44.40	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	5.8e-50	42.67	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	1.4e-48	46.01	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 51..243 e-value: 5.6E-45 score: 155.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 107..240 e-value: 4.4E-41 score: 141.0
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 109..244
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 49..108
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 109..244
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 49..108
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 58..240

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh13G003080	CmaCh13G003080	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G003080.1:exon:231	CmaCh13G003080.1:exon:231	exon
CmaCh13G003080.1:exon:232	CmaCh13G003080.1:exon:232	exon
CmaCh13G003080.1:exon:233	CmaCh13G003080.1:exon:233	exon
CmaCh13G003080.1:exon:234	CmaCh13G003080.1:exon:234	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G003080.1:cds	CmaCh13G003080.1:cds	CDS
CmaCh13G003080.1:cds	CmaCh13G003080.1:cds_2	CDS
CmaCh13G003080.1:cds	CmaCh13G003080.1:cds_3	CDS
CmaCh13G003080.1:cds	CmaCh13G003080.1:cds_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh13G003080.1	CmaCh13G003080.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity