CmaCh13G003080 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh13G003080
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionexopolygalacturonase-like
LocationCma_Chr13: 3282907 .. 3291711 (+)
RNA-Seq ExpressionCmaCh13G003080
SyntenyCmaCh13G003080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGGTTTGGTAGAAATTGTTGATTAAACCAACTTCCAAAAAGCGGATTGTGAGTATTGACCCTAATCCCATATTTAATCCCATATTTAATCCCATATTTAATACCAATTTAATCCCAAATTCATGAAATTAACAATTCAATTTCTACCGTAACCATCTATACTTCCATCCCTCATGCCTTCAATATTATTCCTGGTATGAGAAATTTAAACCTATTCATGTAATTTTGAAGTTTACCAATCAAATAATTACTTAAATTGATGCTAAATAAGATGTCTTAATCGTGTCATACATGATTTAGATTTAAAAATGTTTTATTATAATTTTTTTAAGATTTAAATAAATGTCTTTAAATTACCAGTGATAAGGGGTCATTATGTGTTGTTGGCTATAAAAGTTAGAATCTTTCTATTAAAACATAAGTTATTATAAATTTTATTTCTAAGGATAGAAATAGTTATTCATGTTATGCTTATATCACATTTTGGAATTAAAAAAAATAGGGTTTCTATTTTAGTTTTGTTGATAGCTAAGTTTTTACTTTCCAAATTCTTGTGTTTATTATAATTTGCATACTAGAGTCATTCAAGTGTTATTGATTAAACCTCTTTGTGGAGTGATTCGAATCACGAGTTTAGAAACGTATTTTCTTTGCTCTTGATCTTGATCATCAAGGTAATCTGATAAGATAAGGAACCACTACAAGAGGAGTAAGAACATTGTTTGAGATTCGAATCACTCCACAAACAAGATCGATCATGTCTAGTTTGAATGATTCTTGTTGATCAAATATCTCAAACACTTGTTTGAGATTCGAATCACTCCACAAGTAAGATTGATCATGTCGAGCTTGAATGATTCTGCATGCAACCTTAACTACATAGAATTGCAAATAAACTTAGTCATTGGCTAAAGAAAGCACAAATGCTCATTATATATATATTTTCCAAGTCTACTCACAAATACAGCATACATGTCTTTATATAGCCTCAAAATGAAACTATTAAAGGCATTCCAAGAGTTGTAACATTCATACTTAATGGTCATAATTAACCGTTATATAATTGTAACCTAAAGTAAATAAAAAGTTTTAAAATACATTGATGAAATACAATAACTCTAAATTGTAATCCACCCAAAATTTATAACATGAAATTCATTCTTCTTCAATGTGGCATGAATTGAAATATCTTTTGATAATTTCAACAATATTTTATTCACATCTTTGTTGAAGCATATTGTGTGATTGATGTCTCTTGGTTCATATCATAATCAATTCCAAAACTTTCCTTTGAGTTGATTCCATATCATTTAGTATCAGAGCTTCAGGCTAAAGATCGGATATATGTTTCCTTTGTGTTTTTTCTTAATTTGATTTTTCTTTATTTTTATCTTTTTAGTTTCTAATCGACTTAGAGTTTAAAATCCAATCTCGACTCTATTGAAAATTTTGAAAGGTGAGAATGAGAGTTTCATATGTGTGAATGAGTACAAGCAGGGTGGCCTAAAAATTCCTTGAGTGTATACACGTGAGAGTGTTTTGAGGTCCTTTATATTTTCATAACTTATTTTTTGTAGCATATTTCACAAATAGATTCGAAGACTAATCCTCTTGAATAATTGGAGAATGACATGAACCAAGAGATATTATACTTCAATGAAGATGTAAAGAAAATGGTGTCAAAATTATCCAAAGATGATTAAATGTGACAAAGAGGAATCAAGTTTTATGGTTATAAATGTTGGGTAAATCATAATTTTGAGTTATAGTGTTTATTTAATGTATTTTAAGGCTTATTTACATATAAGTTAATTATGGCCCTAAGATATAATAGTGACTCATTATGGTCGTGAAATATAGTTACAACTTTTGACTGATGAAGGTTAAGAGTGGTTGTTTTGAGGCTCTATAAAGCCATGTTATATTTCTAAGATGGGACTTGAAAAATGTAGTAAATTAGGGTTATTTTTTTTTTTTTTAAGCAAATGCTAAGTTTCTTTGCAATTATATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTAGATATGATCGATCTTGGTTGTGGAGTGATTCAAATCTCAAACAAGTGTTCTTTCATTGAGATATTCGATTAAAAGGTAATCCCCTTACTCCCCTTGTAGTGATTTCCATATCATTTGGTATCAGAGCTCTAGACTCAAGGTCGGATATATACTTCCTTACGTTTATCTCTTTAATGCTCGTATAATTTTTTTTTCTAGTTTGTGTAGAATGTTCCTATTCTATCTCAAAACTTATAAAAAAAAAAAAAAAAAAAATTGTTTCTGAAGTGTTAGATATGTATCTTATCAACATTTTGTTCTTCTTTAATATTTTCTAAATCTAACCTTCTTTTTGGTACATTGATGGTAAATGAAGACAACCTCTATCAATTTGAATCTCAGTCTTTTAAGGTTTTTTTTTGTTGTATTTTTCCAAATAAATAAGATGGTCGTATGTTTGAAGGAGACTCTGTGTCGTGAACAATGTAATGTTTTTAGTACCTTGACGTTATAAAATAAAATGCTTTCACTCTTATCTATATTTTTCAGTGAGTAGTATCCTTAAATTCAGTGAGTAGTATCCTTAAATCTATATTTTTCGTCAATGGTGTACATTCGATTATATTGCAATTTTTAGATCGTCTTGAAAAACATAGAATTTTAGATTAGAAAATTAAGTGACAAGTATTTGATGGTGTTAATATAACATGTGGAAGCAATTTGGATCTTAGGCACTCTAAGTACATCAATTATAGTGAATTAGCTAGCATGTTCAAAAACATTAAAACTCAATGGGTTTGAATACTAACCTTTTGTAGCTCAAGTTTCTTTTTCCTCACTAGTGTCTTCTCCACTATTCTCCGGCCTTAGAACGGGATTGTGGAATCCGGTGAGTGACTAAACTTGGGAGGGATTTAGTATATATGAAGAGAGAGTTTGTGAGAGGTTTTTCTCAAGGTTTTTTCCCTTGAGCAACCTTCCATTTACCATGATCACTCTATTTATAGAGTCATGTTTGCATGTTCATGCAAATTTGAGATCACCAAATTTTGACACTCAAAATTCCACTCAAATGTTTGGGATTACGTGGCAAACATGCATGCTTAAGTTAACCAAATTTTGACACTCAAAATTTCACTCAAATTTATGAGGTTTATTTGGCAAGCATGCAAGTTTGGTTAAACCAAATTTTGACACCTCAAAATTCCACTAACATGGATTTTTCCATTAAATGAATTCAACATTGTGACTTTCTTCATTTTGATTCAACAATCCATTTGAATTATGAATTCCAAATTAAAGTAATATTAAATGATTAATTAAGCTATTTAATTAATATTTAATATTAATTCAAATGTCAATCCCAATTAATTCCGACACATATTTGATTAAGATATTTAAATCTTATTTAAATATCTCAGATTCTCTCTTTTTGTTTAATTCGTAAATAGAACATATAGTCCTTCATTATCCTAAGATACTTGAGCATATTCTTAACGACAGTCCAATGAGCACGTCCCGGATCGGACTGATATCTGCTGAAAATTCCCACAGCATAACATATGTCGGGTCGGGTACATAGCATGGCATACATTAGACTACCGACTACTGATGCATAGGGAATGTGTCTCATATCCTCAACTTCTTGAGGTGTCTTAGGACTTTGTTCCTTTGACAAATGAACTCCATGCCTGAAAGGTAATAATCATTTCTTGGAGTCCTGCATCTTATATCGAATCAACATTTTGTCGATGTACGATGCCTGAGACAATGCTAGTGTTTTGTTCTTGCAACTCCGAACAATTTGGATTCCAAGAACAAACTGAGCCTCTCTCAAATCTTTCATTTGGAATTGTATCGCTAGCCAATACTTAATGTCAGTCAAAAATTCCACATCATTCCCAATGAGTAGAATATCGTCAACGTATAACACCAGGAATGCTACTGTAGAGTTGACTATCCTTTTATAAATACAAGGTTCGTCAACATTCTGTTTAAAGCCATAAGATTTGATCGCAGTATCAAACTTTATATTCCAGGATCGAGATGCTTGCTTCAACCCATAAATGGATCTTTTAAGCTTGTAAACTCTTTGCTTGTGATCCTATTCAATGAACCCCTCTGGTTGAGTCATATAGATACTCTCTTCAAGATTGCCATTTATAAAGACTGTCTTAACATCCATTTCCCAAATTTCATAATCATAAAATGTGGCAATAGACAAGAGTATTCTAATCGGTTTAAGCATAGCAACAAGAGAGAAGGTTTCTTCATAGTCCACCCCCTCTCTTTGGGTATAACCCTTTGCTACAAGTCGAACTTTTAAGGTCTGTACCTTGTCAGTTTGGTCTTGTTTCCTCTTATAGATCCATTTGCAACCAATAGGTTTTACCCCATCTGGTTGATCTACAAGTTCCCAGACTAAATTGAAGTACATTGACTCCATTTCAAGATTCATGGCTTTGATCCACTGATCTCTATCTTCATCATTCATTGCCTGTTTATAGGTCAATGGATCCTCAATGCCATTATTAGGTATGATGACTTGAGTTTCTGCCAAACCCAAGTAACGATCGGGTTGAGTTATAACCCTCCCACTACGTCGAGGTATTCTCAACTCTTGAGAAGGATGTGATTGACTAGAAGTGTCAGCTCCATCAACAACTCTTGTTGAAGGACCAGCTTGATCAACAACTCTGGTTGTTTTATCAGTAGCTTCTTTAGAAATCTCATTTAATACTAGTTTGTTGCGAGGTTGATGATTTCTTACGTGGTCTTCCTCTAAGAATGTAGCATTTGTTGATACAAACACTCTATTTTCTTGAGGGTCATAAAACAAACCACCTTTCGTCTCTTTGGGGTATCCTACAAATAGATATAATTTTATACGACGTTCTAATTTCTTGGGGTTTTGCAACAACACATGTGCTGGACATTCCTAAATCCTGAAGTGACGTAAACTACCTTTACGCCTTTTCCATAACTCATAAGGTGTTTCTTAAACACTCTTAGTCGGAACCATGTTTAAAATGTATGTAGCAGTCTCCACTGCATATCCCCAAAACGGATCGGGTAATTGAGTGAAGCTCATCATAGACCGAATCATGTCTAACAGAGTTCTATTTCTCCTTTCTGATACACTATTTTGTTGAGGCATACCAGGGGCTGAGAGTTGAGACTTTATTCCATATTCTATCATATAGTCCTGAAATCTTAAGTCCATATACTCTCCTCCTCGATCTGATCGAAGTGTTTTAATAGTTTTACCTAATAGATTTTCAACCTCAGTCTTATACTCTCTGAATTTTTCAAGAGCTTCGGACTTGTGATGCATTAGGTAAAGATTGTCATACCTTGAATAATCATCAATAAAACTGATGAAATATTCGTACCCTCCTCGTGCTTTGACATTTATTTGACCACAGAGATCTATATGCACGAGTTCTAAGATTTCTTTAGCTCTATAACCTTTTTCGGAAAACGGTCATTTAGTCATTTTACCCTCAAGACAAGACTCACATGGAGGTAAAGAGTTGTCTTCTAACTCATTTAGAAGTTCTCTTTTACCAATCTCTCAATCCTATTGAGATTAATGTGGTCTAGTCTTAAGTGCGAAAGATAGGTATTAGGAGAAATCTTTTGTCGTTTATTTTGAGTTTCAACTGTTTTAAACATCTCGATATTTAAAATAATTTTTGTTTCGCTCGGTTTTAACATATATAAGTTGTTTTCTAGTTTTGCATAACAAATATGAATATCTCTTTTATAAATGAACACTTCATTGATTTCAAAAGATACTTTATACAATTGTTCTACTAAATAAGAGATAGATATTAGATTTCTTTTCATTTCAGGAACAAAAAGTACATTCTCTAATATAATTAACTTATCTCCAAAAAAAAACAACTTTAAAGTTCCTACTGATCTTGCTGAGACAACCTCTCCTGTTCCAACCCTAAGTGTTATCTCGCCGTCCGTAAGCATTCTCCAGGAGCTAGTTTCCTGGTAAAAAGAACAAATATGATTAGTCGCCCCTGAATCTAGTATCCAAGTTGAGTTGTCATAGTCTACTAAACATATTTCTACAACAAGTAAATCATATTTACCTTGTTGTGTCTTTTAGTTTTAGGAAAAATGTTGATAATCTAAGAAAAATTAAATATCAAAAGAAGCGAAATGTTCTAGGAGATTACTAGACTAGAACTTATTGAAATTGTCCAAAATCTGAGGTAATTAAGGCCAAGAAACGACAAACACCAGCAAAAGAGAGAAAATAAAACAAAACTCGGTCTTAATTGATGATGCTCTGTTTTGTGTTTTCAAGTCTTAAGATATTGGTTGCTCGCGAGTTGAGCTTGGTTGTGTTGAGATATTTTTTTTAGATTTAACTCAATTATTTGTATCATAAATTTATTCAACCCAAGCAACCCTTGTTAAATAATTAAATCTTTTGATTTTTATGTTTATAGTATGATATATAAGAAGAAAAGTGGATACGAAGCTTTTTGGAAATGGCAAATGGTGCCCCATGTTGAAGCTTTGGACCGGAATTTGAAATTTGGATCCAGCAACTGATTCCCTTGACATTCCTCTCCATCAATGTGATGTGGCTACATTTCCAACTTGTCATAAATTGCTTCTAAGAGAGAAAACTATCCTCACAAATCAACACGGTTCATTTTAGCAGTCTTTTTCCTTACTCAGATGTCTCCTAAGATGTAACTTCATACCTAGAATTTGGACCCGAATTTGTAATCCAAATTTGGCACCCGATGGCCCTCACAATCCCTTTGCATCTTCAATGATATGGTCATATTATTTACTTGTTTTGAATTGCCTCTAAGAATGAAAAGTATACCTAAAAATCACATTACCTATTTTTGGTGGCTCAATCATAAAATTCAAAAGTTAAGAGGGTTTAGTTTAGAGCAATCTTATGTTAGGGGACCACTTGAAAATTTCTTAATAATCAATTGAGTAAAGACAAAGTATGCTAAAAATATTTCATTGGAGTTTGAAAAATAGTTTGAAATTTCTTCCCCTCCACCCATAAAAGTTTTCTAACATTGAAATTAATGTATACTCAAGTGCATCTTGTAATAGAAACTTCATTTGTACAAGGCTACCATTAATTTGTGGCTGTAAAGCTTGTTTCCTTCCGAGAAAAGTACTTCGTTGGGTTTGGCCAATGCCTAGTTTCTTTGAGATTCAACTGTTCATTGGCAAGTGAGAGAGGTATTGAAACACAACCATTAATGAACAACTTAGCGAAACAATAAACAACATTAAGTTATCAATTATGTTTGGATTAAGAGAGGGAGATGGAACCATAACTTTTGATAGTTCCATCCCAACTTGATTTCTATTCTTCAATTGGCATTATTAAATACATAAAGGTTCCAAATCTAAAATGAAATATCATTGTCTCTCACTAGTATTCAAGCAATATACATAACAAAAGAAAAGGAAGCAAGGGCATCATGAGTACGATCAAATCGAGTTTCTTGGTTGCTACAATCTTGACGCTATTATTGTTAGATTTTACCGTTGATACTCAATCTAGTGCCGATGTTGTTTTTCCTTTGAAAAGATATGGTAACATAGTGCTTCGTACTGACATCACAAAGGTAAATATACAGTATGAACATCAATATTATCACTCGTTGAGTTGATCAATTGTTTGCTAATTTTTGTTACTTGTGACATGTAGGCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTTAGGGAGATAATTGGATTGCTTTTGAACATATTGATAGATTGACATTGTCAGGTGAATGAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTGTAAGCAATATGCCTTCAGCTTTCCTTCTCAATCTCGTGCATCTTGTTGTTTTTAGATGTCTTCTCTAATCTTCTAACATTTATAATTTGGTAAGCGTTCTTTATTTTCTAGAGGATAATCTTTAACCATTGTAACAAAAAAAAAAAAAAAAAAATGTAAAGAAGTGAAATTCTTTTCTGAGTTTTCGATTTTATTGGGTTCTGTTAAAATTTTTGGCTTCATTACTGACGCTCACAAAATATTATTTGATTATACAAACTGTTTAGAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

mRNA sequence

ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAATTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

Coding sequence (CDS)

ATGGAGACTCAGAACAATGCTCGACTAGGCATTGACTTCATGATACTACTCCATGGACTTGGCAGTGATTTTGCAGGAAACGCTAATTCGGAATCACTCGCCCCTAATTATAAAATACTCAAAATTCTGTCGAATTTTGGATGGGGAATTTGCAAGAACCGGTGTTGTGTGATTGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGAACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAATTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATCGCCATAAACGCATAAATTGTGACCAACTCCCCATTAGTTTGAGGTTCAACTTCAATACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGATATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCATAAGCATCGAAAGTCTTGGAAAATATACTAATGAAGTACCGGTTTAA

Protein sequence

METQNNARLGIDFMILLHGLGSDFAGNANSESLAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPKIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV
Homology
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BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-52
Identity = 108/213 (50.70%), Postives = 133/213 (62.44%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +  AWK+AC S   S I++P G F V     + PC S I  QL GTL+AP          
Sbjct: 6   LTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG 65

Query: 118 ----------------IFDGQGKAAWKKNDRHKR-INCDQLPISLRFNFNTNSIVKRITS 177
                           +FDGQGK+AW +ND HK    C  L ++LR    TNSI++ +T+
Sbjct: 66  WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTT 125

Query: 178 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 237
           LDSKNFH+NV+GC NLTF    I+A E S NTDGIHIGRS+ + I  ++I TG DCISLG
Sbjct: 126 LDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLG 185

Query: 238 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DGSK INITN+TCGPGHGIS+ SLG+Y NE  V
Sbjct: 186 DGSKNINITNITCGPGHGISVGSLGRYKNEESV 218

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BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 96/210 (45.71%), Postives = 129/210 (61.43%), Query Frame = 0 

Query: 60  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK----------- 119
           +AWK+AC S   S +VIP G + + +   + PC +PI+  + GT+QAP            
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 120 --------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDS 179
                         IFDGQG  A++KN    R    +LP+++RF+F TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDS 170

Query: 180 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGS 239
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TG DCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 240 KQINITNVTCGPGHGISIESLGKYTNEVPV 245
           K + I  +TCGPGHGISI SLGK+ NE PV
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPV 260

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BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 96/210 (45.71%), Postives = 129/210 (61.43%), Query Frame = 0 

Query: 60  NAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK----------- 119
           +AWK+AC S   S +VIP G + + +   + PC +PI+  + GT+QAP            
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 120 --------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDS 179
                         IFDGQG  A++KN    R    +LP+++RF+F TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDS 170

Query: 180 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGS 239
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TG DCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 240 KQINITNVTCGPGHGISIESLGKYTNEVPV 245
           K + I  +TCGPGHGISI SLGK+ NE PV
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPV 260

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BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-47
Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGT-------------- 117
           +  A+  AC +   S ++IP G FK+ E +   PC SPI+F L G               
Sbjct: 39  VLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRW 98

Query: 118 ----------LQAPKIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLD 177
                     L     FDG+G AAWK N+ HK   C +LPIS+RF+F  N+ +K +TSLD
Sbjct: 99  VVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLD 158

Query: 178 SKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDG 237
           +KNFH NV+   N+TF NI I AP  SPNTDGIH+GR   + I  +KIATG DCIS+GDG
Sbjct: 159 AKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDG 218

Query: 238 SKQINITNVTCGPGHGISIESLGKY 239
            K + I  V CGPGHGIS+ SLG+Y
Sbjct: 219 MKNLLIEKVVCGPGHGISVGSLGRY 243

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BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-47
Identity = 98/213 (46.01%), Postives = 125/213 (58.69%), Query Frame = 0 

Query: 59  ANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP----------- 118
           A AWK+AC +   S I +P G + V+   FK PC  P+  +L G  +AP           
Sbjct: 90  AAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAG 149

Query: 119 ----------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITS 178
                            IFDGQG  AWK ND  K   C+ LPI++RF   TNS +  ITS
Sbjct: 150 WIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITS 209

Query: 179 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 238
            +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TG DC+S+G
Sbjct: 210 TNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIG 269

Query: 239 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DG++ + + NV CGPGHGISI SLG+Y NE PV
Sbjct: 270 DGTENLIVENVECGPGHGISIGSLGRYPNEQPV 300

[Close]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match: A0A6J1EWD3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match: A0A6J1EHA1 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match: A0A6J1F4C6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match: A0A6J1EHN0 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.9e-94
Identity = 176/209 (84.21%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 2   LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 61

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 62  FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 121

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 122 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 181

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHG+SI SLG+YTNE PV
Sbjct: 182 QINITNVTCGPGHGVSIGSLGRYTNEEPV 210

[Close]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match: A0A6J1F1K6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.6e-94
Identity = 176/209 (84.21%), Postives = 179/209 (85.65%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLP SLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. NCBI nr
Match: XP_022927477.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. NCBI nr
Match: XP_022932204.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. NCBI nr
Match: XP_022933298.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 6.1e-94
Identity = 177/209 (84.69%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. NCBI nr
Match: XP_022927431.1 (exopolygalacturonase-like, partial [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 8.0e-94
Identity = 176/209 (84.21%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 2   LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 61

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLPISLRFNF TNSIVKRITSLDSK
Sbjct: 62  FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSK 121

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 122 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 181

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHG+SI SLG+YTNE PV
Sbjct: 182 QINITNVTCGPGHGVSIGSLGRYTNEEPV 210

[Close]
BLAST of CmaCh13G003080 vs. NCBI nr
Match: XP_022932205.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 176/209 (84.21%), Postives = 179/209 (85.65%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAPK--------- 117
           +ANAWKDACTSNRSSAIVIPGGIFKVKEGIFK PCNSPIDFQLGGTLQAPK         
Sbjct: 51  LANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWIT 110

Query: 118 -------------IFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLDSK 177
                        +FDGQGKAAWKKND HKRINC QLP SLRFNF TNSIVKRITSLDSK
Sbjct: 111 FERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDSK 170

Query: 178 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDGSK 237
           NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATG DCISLGDGSK
Sbjct: 171 NFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSK 230

Query: 238 QINITNVTCGPGHGISIESLGKYTNEVPV 245
           QINITNVTCGPGHGISI SLG+YTNE PV
Sbjct: 231 QINITNVTCGPGHGISIGSLGRYTNEEPV 259

[Close]
BLAST of CmaCh13G003080 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-52
Identity = 105/236 (44.49%), Postives = 146/236 (61.86%), Query Frame = 0 

Query: 33  LAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPC 92
           ++ N ++  I S+ G  I +     +  A+  AC S+  S +VIP G FK+ E   + PC
Sbjct: 18  ISANAEVFTIGSSSGSDITQ----ALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPC 77

Query: 93  NSPIDFQLGGTLQAP------------------------KIFDGQGKAAWKKNDRHKRIN 152
            +PI+  L GT++A                           FDG+G AAW+ N+ HK   
Sbjct: 78  KAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFE 137

Query: 153 CDQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHI 212
           C +LPIS+RF+F  NS ++ I+S+D+KNFHINVLG  N+T +NI I APE+SPNTDGIH+
Sbjct: 138 CKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHL 197

Query: 213 GRSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           GRS+ + I  S I+TG DCIS+GDG K +++  VTCGPGHGIS+ SLG+Y +E  V
Sbjct: 198 GRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 249

[Close]
BLAST of CmaCh13G003080 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 3.1e-51
Identity = 98/211 (46.45%), Postives = 132/211 (62.56%), Query Frame = 0 

Query: 58  IANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP---------- 117
           +  A+  AC +  +S +VI  G FK+ E     PC +P++  L GTL+A           
Sbjct: 40  LLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERW 99

Query: 118 --------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITSLD 177
                          IFDG+G AAW+ N+ HK   C +LPIS+RF+F  N+ ++ I+S+D
Sbjct: 100 VVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSID 159

Query: 178 SKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLGDG 237
           +KNFHINVLG  N+TF N+ + AP  SPNTDGIH+GRS  + I  SKIATG DCIS+GDG
Sbjct: 160 AKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDG 219

Query: 238 SKQINITNVTCGPGHGISIESLGKYTNEVPV 245
            K +++ NV CGPGHGIS+ SLG+Y +E  V
Sbjct: 220 MKNLHVENVMCGPGHGISVGSLGRYVHEQDV 250

[Close]
BLAST of CmaCh13G003080 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-51
Identity = 103/232 (44.40%), Postives = 142/232 (61.21%), Query Frame = 0 

Query: 33  LAPNYKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPC 92
           L+ N KI  I S  G  I       +  A+ +AC     S ++IP G +K+ E +   PC
Sbjct: 19  LSANAKIFNINSPPGSDITN----ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPC 78

Query: 93  NSPIDFQLGGTLQAP-----------------------KIFDGQGKAAWKKNDRHKRINC 152
            +PI   L GT++A                         +FDG+G AAW+ N+ HK  NC
Sbjct: 79  KAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNC 138

Query: 153 DQLPISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIG 212
            +LPIS+RF+F T++ ++ ITSLD+K+FHINV+G  N+TF ++ I AP  SPNTDGIH+G
Sbjct: 139 KKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVG 198

Query: 213 RSNRIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNE 242
           RS+ I I  S I+TG DC+S+GDG K + +  VTCGPGHGISI SLG+Y++E
Sbjct: 199 RSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHE 246

[Close]
BLAST of CmaCh13G003080 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 5.8e-50
Identity = 99/232 (42.67%), Postives = 140/232 (60.34%), Query Frame = 0 

Query: 37  YKILKILSNFGWGICKNRCCVIANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPI 96
           +++L++ S+ G  I +     +  A+  AC S     +VIP G FK+ E +   PC SP+
Sbjct: 23  HEVLRLTSSPGSDITQ----ALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPV 82

Query: 97  DFQLGGT------------------------LQAPKIFDGQGKAAWKKNDRHKRINCDQL 156
           +  L GT                        L     FDG+G AAW+ N+ HK   C +L
Sbjct: 83  EITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKL 142

Query: 157 PISLRFNFNTNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSN 216
           PIS+RF+F TN+ ++ I+S+D+KNFHINV+G  N+TF N+ I AP  SPNTDGIH+GRS 
Sbjct: 143 PISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSV 202

Query: 217 RIAITMSKIATGYDCISLGDGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
            ++I  S+I+TG DC+S+GDG   + + NV CGPGHGIS+ SLG+Y +E  V
Sbjct: 203 GVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDV 250

[Close]
BLAST of CmaCh13G003080 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 98/213 (46.01%), Postives = 125/213 (58.69%), Query Frame = 0 

Query: 59  ANAWKDACTSNRSSAIVIPGGIFKVKEGIFKEPCNSPIDFQLGGTLQAP----------- 118
           A AWK+AC +   S I +P G + V+   FK PC  P+  +L G  +AP           
Sbjct: 90  AAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAG 149

Query: 119 ----------------KIFDGQGKAAWKKNDRHKRINCDQLPISLRFNFNTNSIVKRITS 178
                            IFDGQG  AWK ND  K   C+ LPI++RF   TNS +  ITS
Sbjct: 150 WIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITS 209

Query: 179 LDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGYDCISLG 238
            +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TG DC+S+G
Sbjct: 210 TNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIG 269

Query: 239 DGSKQINITNVTCGPGHGISIESLGKYTNEVPV 245
           DG++ + + NV CGPGHGISI SLG+Y NE PV
Sbjct: 270 DGTENLIVENVECGPGHGISIGSLGRYPNEQPV 300

The following BLAST results are available for this feature:
BLAST of CmaCh13G003080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P245484.6e-5250.70Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1[more]
Q397663.1e-4845.71Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1[more]
Q397863.1e-4845.71Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1[more]
P353371.2e-4746.83Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1[more]
P490632.0e-4746.01Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ... [more]
BLAST of CmaCh13G003080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EWD33.0e-9484.69exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=... [more]
A0A6J1EHA13.0e-9484.69exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=... [more]
A0A6J1F4C63.0e-9484.69exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=... [more]
A0A6J1EHN03.9e-9484.21exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=... [more]
A0A6J1F1K68.6e-9484.21exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=... [more]
BLAST of CmaCh13G003080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927477.16.1e-9484.69exopolygalacturonase-like [Cucurbita moschata][more]
XP_022932204.16.1e-9484.69exopolygalacturonase-like [Cucurbita moschata][more]
XP_022933298.16.1e-9484.69exopolygalacturonase-like [Cucurbita moschata][more]
XP_022927431.18.0e-9484.21exopolygalacturonase-like, partial [Cucurbita moschata][more]
XP_022932205.11.8e-9384.21exopolygalacturonase-like [Cucurbita moschata][more]
BLAST of CmaCh13G003080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07820.13.6e-5244.49Pectin lyase-like superfamily protein [more]
AT3G07840.13.1e-5146.45Pectin lyase-like superfamily protein [more]
AT5G48140.16.8e-5144.40Pectin lyase-like superfamily protein [more]
AT3G07830.15.8e-5042.67Pectin lyase-like superfamily protein [more]
AT3G07850.11.4e-4846.01Pectin lyase-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 51..243
e-value: 5.6E-45
score: 155.7
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 107..240
e-value: 4.4E-41
score: 141.0
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 109..244
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 49..108
NoneNo IPR availablePANTHERPTHR31375:SF248POLYGALACTURONASEcoord: 109..244
NoneNo IPR availablePANTHERPTHR31375:SF248POLYGALACTURONASEcoord: 49..108
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 58..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G003080.1CmaCh13G003080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004650 polygalacturonase activity