CmaCh11G013550.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G013550.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	signal recognition particle 43 kDa protein, chloroplastic
Location	Cma_Chr11: 8965816 .. 8972313 (-)
Sequence length	2035
RNA-Seq Expression	CmaCh11G013550.1
Synteny	CmaCh11G013550.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGTTTGATTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCCTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTCCTCGCCTGAGACGATATCAGAGCTCAAGAAGCAACCATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGTGCGGCTGGTTTCCCTTGTTCTTACAATTTTAATATCGAAACGAATCCAGAACGTCTATATCACCTTGATTGTTTGTTATCTCGCTCTTTGTTCCTTCTCGCCGTTTGTTAGGTTTGATTGTTTAATCCAATTTGTTAGAACTTGTGTTCATAACAATGAAATAGGAAAGTTTAACCAGAAATGGATGTCTGCAAACGACATATTGAACGAAAGACTGGGTCATAGAAGCTTATTCTAGGATCAACTATGGTAGTATGAATGTTGGGCACCTGTTATCTTGAGGCCTGCTGCAAATTTTTTAGCGAGTTATATTGTTGTAATCTATTGGAAATCGAAATCTAACAGAACAGCTTCTAAATTTTGAAATACCTTCTTTAGGAGTAAGCATTGTATCAATCATGTCACTCACTACTACATAAGTAATCAACAGTTCAGGTAACTTGACTTCTTGTGTTGCTGCTTCTCTTAGGATAGAATATGTCTACTAGTGAGTGATGCGAGGAGTTGGATTTATTCTGTGAAGGGAATTAGTTTTTGTCGACTTCCCTTCACTCTTATTTGCTCTTGGATTGCGCTCTTTATGCCCCGCTGTGAGATGCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGAAAACCTCTCCCTAGAAGACGTGTTTTAAAAAGCTTGAAGGGAAGCCTGAAAGGAAAAACCCAAAGATGACAATATCTGCTAGTGGCGGGCTTGGGCTATTACAAATGGTATCAGAGCCAGACATTAAGCAGTGTGTCAGTGAAAACGCTGGCCCCCGAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGAGAGAGGAACAAGTGCTAGCAAGGACGCTGGGTTCCGAAGGAGGTGAACTGTGAGATCCTATATCAATTGGAGAGGGGAACGAGTGCCAGCGAGGATGCTGGGCCTTGAAGGGGGTGGATTGCGAGATCCCACATTGATTGCGGAGGGCAACGAAACATTATTTATAAGGGTGTGAAAATCTCTCCCTAACCGACGCATTTTAAAAACCTTGAGGCAAAGAGGACAATATCTACTAGTGGTGGGTTTGGGCTGTTACACCCCTCTTTGCACGCACTTTATTTATGATATCTTTGAATGCACTTTATTTCTGATATGATATTTGTCCATCTTCAGAATGTTTATGGTGATGGTACCTGTTGGTAACTTGTCTGGTTCTGATCTTTTAACATAGTTACTTGTGATCTCCCTGAGTTGCTGTTTTTTCTTCATAGCTTTTATGATAATGGCTTTTGTCTCCAACCAAAAAAAAAATTAATTTCTACATCTTTGTTTTTGAATCGACGGGCTTTCTGATGTTATCTCAGCTCCTATCATGTGGCAAGTAGAATTAACCTGTTTCTACACTTATGTTTTGGATAGACAGTCTTTTCACTGAATTTTCACTTGTATTTCATGCCTAATGTAAGATCCTACGTTGGTTGGAGAAGGGAACGAATCATTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGAGTTTTAAAACCTTGAGGGGAAGTCCTTAAAGGGAAAGCTCAAAGAAGATAATATCTGCTTGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGTTAGACACCGGGCGGTTGCCAGCGAGGACGCTGGCCCCGAGGGGTGGATTGTAAGATCCTACATCGGTTGGAGAGGGAAACGAAACATTTCTTATAAGAATGTGAAAACCTTTTCCTAGTAGACGTGTTTTAAAACCTTGAGGGGAAGCCTTTGAAGAGAAAGTCCAAAAAGGACAATATTTGCTAGCGGTGAGCTTGGGTTGTTATACCCAATTTTTTTTTTTTAAAGAATCATGTTAAATTATTTGTTCTTGTTTTAACAACTTGCCTTTTTCTGTTCATATCATCAACTAAATGCTTTGATTCACATTTAAAAAAAAATTGCCCCCTCCTGAGAAGTTCATAGATTATCGATCAACTATTTTGGATGGAGGTGAAGTGGTTAATTATTCATAAAATTGAGACCACAAGCTTTGGAAACATGAAACGCAGGATATTTTTCATCTAAATCTACTGCCAACCAACTCAATACTGCCAGTGAAAAACCCTTAACAATAATAACTAATGAATGTCATCGGGATATTTAGGAGCATATTAGTCATCAGGTTAGGAATTTATAGGTGGGAGATGGTTATAAGTAAGGTGAGATTGGATAGAGGGGATGAAGAAAAGCTGTGGTTTGTTTATTTGTGTAACAGCTCAAGCTCACCGCTAGCAGATATTGTCCTCCTCTTTGGGCTTTCTCTCGAGGGTTTTGAAACGTGTTTACTAGGTAGAGGTTTCCACATCCTTATAAAGAATGCTTCGTTATCCTCCCCAACCGATGTGGGATCTCACAATTTGAGTCTAGAGGGAGGTGTCCAAGTTCCCCGAGTTACCTAGGATATTGCATTCTACTTTTCTCTTCAAGTTTTTACTGCAATTTCAATTATTTGGTTCTTGTGGGAGTTGTTAGATCTTTGCAACAAACGTGGATCGTTGGACAGTTTTGTTGGAATTATACGAAATACCGAAAGGAAGAAACGACTTCAGTTAAATTAAACCCATTTGAGGGGATAAAATTAAAACCCTGATGTTTCCTATAAAATAAAAATGTACTTTTACTGAGTTTTCTTTGCCCCTGGTGTTCTGATGATTAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTAGCTTAATGCACAACTTTTTTAAAGAACATTATTCTGGTTTTTCCTTCTTCCTTAGAACCGTGCATGCTTTTATATTTTGTGGTGGTAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCATAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGCTAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTTCGTAAATGCATATAAATAGTTTTGGGTCCTATGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTAAATCCTTGAGGTTTTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGATGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAAGAAGGATATAACTTCTTGATGTCTGTCTATAATCGACTATCTAATCAAAATACTATGATCTAGATGTGAACCTTAATGCTAGAGTGCTTTTTCCATACTGAGGTTCACTTCTCAAGTGCTTAATTATGTGAGATCCTATATCGGTTGGAGAAGGGAACGAAACATTTCTTATAAAAGTGTCGAAACCTCTCCCTAACAGACGCAGTTTAAAACCGTGAAGCTAGCGACGATATGTAATGGGTTAAAATGGACAACATCTGCTAGCGGTGTGCGTGGACTGTTACAAATGGTTTTAGAGCTAGACACTAGGCGGGGTGCCAGCGAGGACACTGGCCTCTAGGAGTGGATTGTGAGATCTTGCATCAGATGGAGAGGCGAACAAAACATTCCTTATACGGGTGCGGAAAACTCTCCTTAACAGACGCGTTTTAAAACTGTGAAACTGGCAGTGATACGTACAAATGCCCTCTGGGTTATAAAGATGTTCGTTTTTCTCTACTCACTCATGGATGCTTGATGCCAATCAAATGGCAAGATCAAAAGCGCTTGCTTCTCGTTCTAAAGTTCTTTTTCAGTGCACTTTACCGGATCATTGTTTAACGTAGGGCCTTCTGTGATAATTATTAGGGTAGATAGTTGGCTGATGATGCAGTTTGATTGTTGTATGCTCGTTCTATCTCTTTAATGTTGTAGCTAAGATAGATAGTTATCGTTTAGGGGCAAATCTGTGATAATTATTATCAAGTGAATTCGGGATAGTTATCAATCTTTCTTATTTTTCATACAAGTTTCCCACTTTTGATGGATTCTGTTTTCTTTGAATGAAATAGTTTTAAATCTTGATACAAAAAGTTTCGAGAATAGTTCAATTTACGATGCTCACCGAGTCCAAGTTTACATTAATTGATCTAGGATCAAGATAGCATGAATTTATTAATTTTTTTTTATCCATATTTGTTTTTAGAAGTATTTTTTATTTTTGATTTTTTTTAAATAATGGTATTTTTAAGAATTTAGGAATATTTTTATTAGTTTTATCTCAAAATTATAACTTAAAAATACTCGAAATAAAATTAAAGAAAAAAAAAAAAAACATTTAGAATCCTGTAAGCAAATGAGAGCCACGAATGGATGGAATTTCTTATCCACAATTCCTCATCTTCGGTTATCCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA

mRNA sequence

CGGGGTTTGATTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCCTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTCCTCGCCTGAGACGATATCAGAGCTCAAGAAGCAACCATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA

Coding sequence (CDS)

ATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA

Protein sequence

MPKKMGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKRAEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEQAELQRKAEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP

Homology

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BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 409.1 bits (1050), Expect = 9.3e-113
Identity = 219/367 (59.67%), Postives = 271/367 (73.84%), Query Frame = 0


Query: 261 AMD--AVFVNQSLSSLKL-PPKPPLPK----LPSPILHLHLRRTFKSFTAYAVNEPLTQQ 320
           AMD  A+ ++QSLS +KL PPK          P  +    +   F+     AV     + 
Sbjct: 7   AMDTCALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEET 66

Query: 321 TQQPDNFPEDDE---SYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVV 380
           T   +   EDDE   SYGEV+ IIGSR+  +   MEYLI+WKDGHSPSWVPS +IA DVV
Sbjct: 67  TSSVEEAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVV 126

Query: 381 AEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEA 440
           +EYETPWWTAA+KADE AL  L+   + RD +AVDE+GRTALLFVAGLGS+ CVR+LAEA
Sbjct: 127 SEYETPWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA 186

Query: 441 GADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATP 500
           GADLDHRD  GG TALHMAAGYV+P  VE L+ELGAD EV+D++G T L LAREI+K TP
Sbjct: 187 GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP 246

Query: 501 R---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKA 560
           +   +QF RR+GLE+VI  LE  VFE+AEV+E++EKRGKG+++EYLV+WKDG D EWVK 
Sbjct: 247 KGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKG 306

Query: 561 ALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGK-MEYLVKWTDIEDATWEPEGNVDSDLI 614
             +AED+  D+E GLEYAVAE+V+GKR+GDDGK +EYLVKWTD+ DATWEP+ NVDS L+
Sbjct: 307 VHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLV 366

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 3.9e-95
Identity = 194/378 (51.32%), Postives = 249/378 (65.87%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKPPLPKLP--SPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDN 321
           M+AV  + SLS LK PP P   + P  S  +   LR   +  TA AV +  T        
Sbjct: 1   MEAVLRHPSLSRLK-PPNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPASK 60

Query: 322 FPEDDESYGEVDGIIGSRSLAD-----------ATGMEYLIKWKDGHSPSWVPSDFIAKD 381
             +DDE+YGEVD I+ SR++ +            T  EYL++WKDGH PSW+P++ IA D
Sbjct: 61  GGDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAAD 120

Query: 382 VVAEYETPWWTAAKKADESALKSLI-DAADSRDFNAVDEDGRTALLFVAGLGSEPCVRIL 441
           VVAEYETPWWTAAKKAD + + +L+ D    RD +A D  GRTA+ F AGLGSE CVR L
Sbjct: 121 VVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRAL 180

Query: 442 AEAGADLDHRDKS-GGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIV 501
           AEAGAD+   +++ GG T LH+A GY +P  V  LLELGA+PE  D +GRTPL L ++++
Sbjct: 181 AEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVL 240

Query: 502 KATPR---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNE 561
             TP+     F RRL LE     LE+ V+E+ EVE++++ RG+G+  EYLV+W+DG D E
Sbjct: 241 AKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDRE 300

Query: 562 WVKAALIAEDLVADFEAGLEYAVAEAVVGKR--LGDDGKMEYLVKWTDIEDATWEPEGNV 620
           WV+AA +AEDLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DIE+ATWEP  NV
Sbjct: 301 WVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENV 360

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BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot
Match: Q2TBV6 (Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-23
Identity = 92/235 (39.15%), Postives = 140/235 (59.57%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+ AARAR+  A+     ++ +E  D YWR+ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWRDEDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRK--NKEVEQAEL 120
            E   RK E +RL E+E+ +L+        KA RV+    KVT  Q+ +   ++ +  E 
Sbjct: 61  LEQLERKKETQRLLEEEDSKLKGG------KAPRVAAS-SKVTRAQIEETLRRDHQHKES 120

Query: 121 QRKAEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHP 180
              AE+AK  L    EE    R++       ++  +EART+EDAI+ +SV +   VDRHP
Sbjct: 121 PDPAEKAKSHLEVPLEENVNRRVL-------EEGSVEARTIEDAIAVLSVTEE-AVDRHP 180

Query: 181 ERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQSPPPQN 233
           ERR++A++ AFEEA+LPRLK+E P +  +Q K M+ K W +SPDNP+NQ   P N
Sbjct: 181 ERRMRAAYTAFEEAQLPRLKQENPNMRLSQLKQMLKKEWLRSPDNPMNQRAVPFN 220

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot
Match: Q9D8X2 (Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-22
Identity = 92/233 (39.48%), Postives = 135/233 (57.94%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKR 60
           MPKK  G NSK+ AARAR+  A+     ++ +E  D YW++ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEQAELQR 120
            E   RK E +RL E+E+  L+        KA RV+    KVT  Q+  +   EQ     
Sbjct: 61  LEQLERKKETQRLLEEEDSRLKGG------KAPRVA--PAKVTRAQIEDSLRREQR--AE 120

Query: 121 KAEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPER 180
             E+AK  L    EE    R+       +++  +EARTVEDAI+ +SVA+    DRHPER
Sbjct: 121 PVEKAKSHLELPLEENLNRRL-------QEEGSVEARTVEDAIAVLSVAEE--ADRHPER 180

Query: 181 RLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQSPPPQN 233
           R++A+F AFEE +LPRLK+E P +  +Q K ++ K W +SPDNP+NQ   P N
Sbjct: 181 RMRAAFTAFEEVQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRALPFN 214

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot
Match: Q96CT7 (Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-22
Identity = 90/235 (38.30%), Postives = 139/235 (59.15%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+ AARAR+  A+     ++ +E  D YW++ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRK--NKEVEQAEL 120
            +   RK E +RL E+E+ +L+        KA RV+    KVT  Q+     ++ +  E 
Sbjct: 61  LDQLERKKETQRLLEEEDSKLKGG------KAPRVATS-SKVTRAQIEDTLRRDHQLREA 120

Query: 121 QRKAEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHP 180
              AE+AK  L    EE    R++       ++  +EART+EDAI+ +SVA+    DRHP
Sbjct: 121 PDTAEKAKSHLEVPLEENVNRRVL-------EEGSVEARTIEDAIAVLSVAEE-AADRHP 180

Query: 181 ERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQSPPPQN 233
           ERR++A+F AFEEA+LPRLK+E P +  +Q K ++ K W +SPDNP+NQ   P N
Sbjct: 181 ERRMRAAFTAFEEAQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRAVPFN 220

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 3.7e-229
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 226 QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL 285
           QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL
Sbjct: 14  QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL 73

Query: 286 PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM 345
           PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM
Sbjct: 74  PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM 133

Query: 346 EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD 405
           EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD
Sbjct: 134 EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD 193

Query: 406 EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG 465
           EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG
Sbjct: 194 EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG 253

Query: 466 ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG 525
           ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG
Sbjct: 254 ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG 313

Query: 526 KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV 585
           KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV
Sbjct: 314 KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV 373

Query: 586 KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 634
           KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP
Sbjct: 374 KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 421

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.9e-217
Identity = 385/392 (98.21%), Postives = 389/392 (99.23%), Query Frame = 0


Query: 242 LPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSF 301
           LPLPSQPHSAISSATAFSPAMDAVFVNQSLS LKLPPKPPLPKLPSPILHLHLRRTFKSF
Sbjct: 37  LPLPSQPHSAISSATAFSPAMDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLRRTFKSF 96

Query: 302 TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVP 361
           TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHSPSWVP
Sbjct: 97  TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVP 156

Query: 362 SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE 421
           SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE
Sbjct: 157 SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE 216

Query: 422 PCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL 481
           PC+RILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL
Sbjct: 217 PCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL 276

Query: 482 AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED 541
           AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED
Sbjct: 277 AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED 336

Query: 542 NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNV 601
           NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEGNV
Sbjct: 337 NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNV 396

Query: 602 DSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 634
           DSDL+ EFETGQKSVGPGP SDLEAQSSNGGP
Sbjct: 397 DSDLVTEFETGQKSVGPGPISDLEAQSSNGGP 428

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160
Identity = 291/354 (82.20%), Postives = 318/354 (89.83%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDN 321
           M+AVF+NQSLS LKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+   
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK--- 60

Query: 322 FPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 381
            PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT
Sbjct: 61  -PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120

Query: 382 AAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDK 441
           AAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  CVRILA+AG +L+HRD 
Sbjct: 121 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 180

Query: 442 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 501
           SGGFTALHMAAGYVKP TVELL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLG
Sbjct: 181 SGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLG 240

Query: 502 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 561
           LE+VI A+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Sbjct: 241 LEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE 300

Query: 562 AGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQ 614
           AGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q
Sbjct: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 349

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 6.2e-160
Identity = 290/357 (81.23%), Postives = 320/357 (89.64%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKPPLP---KLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQ 321
           M+AVF+NQSLS LKLPPKPPLP     PS I HL+LRR F  FTAYAV  ++P+TQQT +
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 322 PDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 381
               PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP
Sbjct: 61  ----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120

Query: 382 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDH 441
           WWTAAKKAD+SAL+SLID+ D RDF+AVDEDGRTALLFV+GLGS  CVRILAEAG +L+H
Sbjct: 121 WWTAAKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNH 180

Query: 442 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 501
           RD SGGFTALHMAAGYVKP TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF R
Sbjct: 181 RDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMR 240

Query: 502 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 561
           RLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Sbjct: 241 RLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 300

Query: 562 DFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQ 614
           D+EAGLEYAVAEAVVGKR+GD+GKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q
Sbjct: 301 DYEAGLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 353

[Close]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 3.0e-146
Identity = 280/377 (74.27%), Postives = 314/377 (83.29%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPK-PPLPKL-PSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQP 321
           MDA+F+NQS+S LK+ PK  PLP L PS I + +L+     F+A AV  ++ L QQ+   
Sbjct: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60

Query: 322 DNFPE--DDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 381
            +  +  +DE+YGEVDGIIGSR+L D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120

Query: 382 PWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLD 441
           PWWTAAKKADESALKSLIDAAD RD +AVDEDGRTALLFVAGLGSE CVR+LAE GA++D
Sbjct: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180

Query: 442 HRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFA 501
           HRD SGGFTALHMAAGYVKPG VE LL+LGA PEV+D+KGRT L LAREI+KATPR+QF 
Sbjct: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240

Query: 502 RRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLV 561
           RR+GLERV+GALE+ VFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVKA LIA DLV
Sbjct: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300

Query: 562 ADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKS 621
           ADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDIEDATWEP  NVD DLI EFE     
Sbjct: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFE----- 360

Query: 622 VGPGPSSDLEAQSSNGG 633
                  D +AQSSNGG
Sbjct: 361 -------DAQAQSSNGG 360

[Close]

BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: XP_022989400.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 804.3 bits (2076), Expect = 7.6e-229
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 226 QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL 285
           QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL
Sbjct: 14  QSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKL 73

Query: 286 PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM 345
           PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM
Sbjct: 74  PSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGM 133

Query: 346 EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD 405
           EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD
Sbjct: 134 EYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVD 193

Query: 406 EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG 465
           EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG
Sbjct: 194 EDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELG 253

Query: 466 ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG 525
           ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG
Sbjct: 254 ADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRG 313

Query: 526 KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV 585
           KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV
Sbjct: 314 KGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLV 373

Query: 586 KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 634
           KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP
Sbjct: 374 KWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 421

[Close]

BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: XP_022928488.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 765.4 bits (1975), Expect = 3.9e-217
Identity = 385/392 (98.21%), Postives = 389/392 (99.23%), Query Frame = 0


Query: 242 LPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSF 301
           LPLPSQPHSAISSATAFSPAMDAVFVNQSLS LKLPPKPPLPKLPSPILHLHLRRTFKSF
Sbjct: 37  LPLPSQPHSAISSATAFSPAMDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLRRTFKSF 96

Query: 302 TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVP 361
           TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHSPSWVP
Sbjct: 97  TAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVP 156

Query: 362 SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE 421
           SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE
Sbjct: 157 SDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSE 216

Query: 422 PCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL 481
           PC+RILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL
Sbjct: 217 PCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVL 276

Query: 482 AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED 541
           AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED
Sbjct: 277 AREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGED 336

Query: 542 NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNV 601
           NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEGNV
Sbjct: 337 NEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNV 396

Query: 602 DSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP 634
           DSDL+ EFETGQKSVGPGP SDLEAQSSNGGP
Sbjct: 397 DSDLVTEFETGQKSVGPGPISDLEAQSSNGGP 428

[Close]

BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 730.3 bits (1884), Expect = 1.4e-206
Identity = 365/372 (98.12%), Postives = 369/372 (99.19%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFP 321
           MDAVFVNQSLS LKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFP
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFP 60

Query: 322 EDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 381
           EDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA
Sbjct: 61  EDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 120

Query: 382 KKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSG 441
           KKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPC+RILAEAGADLDHRDKSG
Sbjct: 121 KKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSG 180

Query: 442 GFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLE 501
           GFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLE
Sbjct: 181 GFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLE 240

Query: 502 RVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAG 561
           RVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAG
Sbjct: 241 RVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAG 300

Query: 562 LEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPS 621
           LEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEGNVDSDL+ EFETGQKSVGPGP 
Sbjct: 301 LEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPGPI 360

Query: 622 SDLEAQSSNGGP 634
           SDLEAQSSNGGP
Sbjct: 361 SDLEAQSSNGGP 372

[Close]

BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: XP_023529738.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719.5 bits (1856), Expect = 2.5e-203
Identity = 363/374 (97.06%), Postives = 368/374 (98.40%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKPPLPKLPSPI--LHLHLRRTFKSFTAYAVNEPLTQQTQQPDN 321
           MDAVFVNQSLS LKLPPKPPLPKLPSPI  LHLHLRRTFKSFTAYAVNEPLTQQTQQPD+
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLHLRRTFKSFTAYAVNEPLTQQTQQPDD 60

Query: 322 FPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 381
           FPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT
Sbjct: 61  FPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120

Query: 382 AAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDK 441
           AAKKADESALKSLIDAADSRDFNAVDED RTALLFVAGLGSEPCVRILAEAGA+LDHRDK
Sbjct: 121 AAKKADESALKSLIDAADSRDFNAVDEDSRTALLFVAGLGSEPCVRILAEAGANLDHRDK 180

Query: 442 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 501
           SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG
Sbjct: 181 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 240

Query: 502 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 561
           LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE
Sbjct: 241 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 300

Query: 562 AGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPG 621
           AGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEGNVDSDL+ EFETGQKSVGPG
Sbjct: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPG 360

Query: 622 PSSDLEAQSSNGGP 634
           P SDLEAQSSNGGP
Sbjct: 361 PISDLEAQSSNGGP 374

[Close]

BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: KAG7022747.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 665.2 bits (1715), Expect = 5.5e-187
Identity = 334/343 (97.38%), Postives = 337/343 (98.25%), Query Frame = 0


Query: 262 MDAVFVNQSLSSLKLPPKP-----PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQ 321
           MDAVFVNQSLS LKLPPKP     PLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQ
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQ 60

Query: 322 PDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 381
           PDNFPEDDESYGEVDGIIGSR+LADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP
Sbjct: 61  PDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120

Query: 382 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDH 441
           WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPC+RILAEAGADLDH
Sbjct: 121 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDH 180

Query: 442 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 501
           RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR
Sbjct: 181 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 240

Query: 502 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 561
           RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA
Sbjct: 241 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 300

Query: 562 DFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEG 600
           DFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDIEDATWEPEG
Sbjct: 301 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEG 343

[Close]

BLAST of CmaCh11G013550.1 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 409.1 bits (1050), Expect = 6.6e-114
Identity = 219/367 (59.67%), Postives = 271/367 (73.84%), Query Frame = 0


Query: 261 AMD--AVFVNQSLSSLKL-PPKPPLPK----LPSPILHLHLRRTFKSFTAYAVNEPLTQQ 320
           AMD  A+ ++QSLS +KL PPK          P  +    +   F+     AV     + 
Sbjct: 7   AMDTCALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEET 66

Query: 321 TQQPDNFPEDDE---SYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVV 380
           T   +   EDDE   SYGEV+ IIGSR+  +   MEYLI+WKDGHSPSWVPS +IA DVV
Sbjct: 67  TSSVEEAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVV 126

Query: 381 AEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEA 440
           +EYETPWWTAA+KADE AL  L+   + RD +AVDE+GRTALLFVAGLGS+ CVR+LAEA
Sbjct: 127 SEYETPWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA 186

Query: 441 GADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATP 500
           GADLDHRD  GG TALHMAAGYV+P  VE L+ELGAD EV+D++G T L LAREI+K TP
Sbjct: 187 GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP 246

Query: 501 R---VQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKA 560
           +   +QF RR+GLE+VI  LE  VFE+AEV+E++EKRGKG+++EYLV+WKDG D EWVK 
Sbjct: 247 KGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKG 306

Query: 561 ALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGK-MEYLVKWTDIEDATWEPEGNVDSDLI 614
             +AED+  D+E GLEYAVAE+V+GKR+GDDGK +EYLVKWTD+ DATWEP+ NVDS L+
Sbjct: 307 VHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLV 366

[Close]

BLAST of CmaCh11G013550.1 vs. TAIR 10
Match: AT1G16210.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). )

HSP 1 Score: 313.5 bits (802), Expect = 3.8e-85
Identity = 166/227 (73.13%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKRA 60
           MPKKMG+NSKAE A++RKN+AE E+K+R+TREK +QYWREAEGPKS+A KKRE+E+EK+A
Sbjct: 1   MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60

Query: 61  EAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEQAELQRK 120
           E AA+K EA+RLAEQEEKELEKA+KKPDKKANRV++PVPKVTE +L + +E +Q  L +K
Sbjct: 61  ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120

Query: 121 AEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERR 180
           AE++KKK  R A E+EYE+MVLV+NTNRDDS+IEA TV++A+++I+V+DNLPVDRHPE+R
Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180

Query: 181 LKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQS 228
           LKASFKA+EE ELPRLK EKPGLTH QYKD+IWK+WKKSPDNPLNQ+
Sbjct: 181 LKASFKAYEEVELPRLKSEKPGLTHTQYKDLIWKMWKKSPDNPLNQA 227

[Close]

BLAST of CmaCh11G013550.1 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 63.9 bits (154), Expect = 5.2e-10
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 381 AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKS 440
           A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+
Sbjct: 226 ASLGDVEGLKAALASGGNKD--EEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 441 GGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAR-----EIVKATPRVQF 495
              T LH AAGY +   V LLLE GA   +Q+   +TP+ +A+     E+VK   +  F
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAF 341

[Close]

BLAST of CmaCh11G013550.1 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 63.9 bits (154), Expect = 5.2e-10
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 381 AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKS 440
           A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+
Sbjct: 188 ASLGDVEGLKAALASGGNKD--EEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 247

Query: 441 GGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAR-----EIVKATPRVQF 495
              T LH AAGY +   V LLLE GA   +Q+   +TP+ +A+     E+VK   +  F
Sbjct: 248 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAF 303

[Close]

BLAST of CmaCh11G013550.1 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 63.9 bits (154), Expect = 5.2e-10
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 381 AKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKS 440
           A   D   LK+ + +  ++D    D +GRTAL F  G G   C ++L +AGA ++  DK+
Sbjct: 226 ASLGDVEGLKAALASGGNKD--EEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 441 GGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAR-----EIVKATPRVQF 495
              T LH AAGY +   V LLLE GA   +Q+   +TP+ +A+     E+VK   +  F
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAF 341

The following BLAST results are available for this feature:

BLAST of CmaCh11G013550.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	9.3e-113	59.67	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	3.9e-95	51.32	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
Q2TBV6	1.4e-23	39.15	Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 ...	[more]
Q9D8X2	1.5e-22	39.48	Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE...	[more]
Q96CT7	2.0e-22	38.30	Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=...	[more]

BLAST of CmaCh11G013550.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM92	3.7e-229	100.00	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1EP65	1.9e-217	98.21	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A0A0K634	2.1e-160	82.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]
A0A1S3BHX6	6.2e-160	81.23	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A6J1C248	3.0e-146	74.27	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]

BLAST of CmaCh11G013550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989400.1	7.6e-229	100.00	signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima]	[more]
XP_022928488.1	3.9e-217	98.21	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moscha...	[more]
KAG6589032.1	1.4e-206	98.12	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]
XP_023529738.1	2.5e-203	97.06	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo s...	[more]
KAG7022747.1	5.5e-187	97.38	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of CmaCh11G013550.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	6.6e-114	59.67	chloroplast signal recognition particle component (CAO)	[more]
AT1G16210.1	3.8e-85	73.13	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014...	[more]
AT4G35450.3	5.2e-10	36.13	ankyrin repeat-containing protein 2	[more]
AT4G35450.4	5.2e-10	36.13	ankyrin repeat-containing protein 2	[more]
AT4G35450.2	5.2e-10	36.13	ankyrin repeat-containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..86
None	No IPR available	COILS	Coil	Coil	coord: 11..33
None	No IPR available	COILS	Coil	Coil	coord: 103..138
None	No IPR available	GENE3D	2.40.50.40		coord: 561..613 e-value: 3.3E-25 score: 89.4
None	No IPR available	GENE3D	2.40.50.40		coord: 511..560 e-value: 2.6E-18 score: 67.3 coord: 325..371 e-value: 3.3E-15 score: 57.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 615..633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 610..633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..251
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 262..615
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 441..473 score: 10.365044
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 407..439 score: 9.409914
None	No IPR available	CDD	cd18628	CD3_cpSRP43_like	coord: 562..610 e-value: 2.27917E-11 score: 57.3912
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 441..470 e-value: 0.0025 score: 27.1 coord: 407..436 e-value: 4.4 score: 16.3 coord: 372..403 e-value: 340.0 score: 8.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 407..439 score: 10.7663
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 441..473 score: 11.727859
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 564..614 e-value: 4.2E-8 score: 42.9 coord: 513..563 e-value: 1.3E-8 score: 44.6 coord: 326..378 e-value: 1.1E-4 score: 31.6
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 565..601 score: 11.019001
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 515..544 score: 8.865101
IPR010422	Coiled-coil domain-containing protein 124/Oxs1	PFAM	PF06244	Ccdc124	coord: 109..226 e-value: 2.1E-38 score: 131.8
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 380..472 e-value: 6.1E-10 score: 39.6
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 372..510 e-value: 4.6E-36 score: 125.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 373..484
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 567..610 e-value: 2.3E-7 score: 30.6
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 262..615
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 513..561
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 567..612
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 323..377

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G013550	CmaCh11G013550	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G013550.1:exon:48	CmaCh11G013550.1:exon:48	exon
CmaCh11G013550.1:exon:47	CmaCh11G013550.1:exon:47	exon
CmaCh11G013550.1:exon:46	CmaCh11G013550.1:exon:46	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G013550.1:cds	CmaCh11G013550.1:cds_3	CDS
CmaCh11G013550.1:cds	CmaCh11G013550.1:cds_2	CDS
CmaCh11G013550.1:cds	CmaCh11G013550.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G013550.1:five_prime_utr	CmaCh11G013550.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G013550.1	CmaCh11G013550.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0009644	response to high light intensity
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0005515	protein binding
molecular_function	GO:0097718	disordered domain specific binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity