CmaCh09G009070.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G009070.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 4512923 .. 4520930 (+)
Sequence length1648
RNA-Seq ExpressionCmaCh09G009070.1
SyntenyCmaCh09G009070.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTTCTTTTCAATTAACCTTATCGTATGGGAATTCTCCGGAGATTTACTCTCAGCGGCTGCCGGCGATGATGAGAACGTCGGAATCAAAGCACCATGCGTCCATGTCTATAGAGGTTCAGTCCTACTTATTTCTCTCAAATTTGAAACTGAACTTCCTGATCTCCGATCCAGGGAGCATCATTTTGGGGCGCGAAGTGCAAGGTCTAGTTTGTGGATGATCCTTTTGGAATAATGGCGGCAGTCTCAGTTAAGCAATCGACTGCGGACAGTAATTGTTAGTCATTACTTCACCTGCTTGTTGTTGTTAAATTATCAAGAGTGACAATGAGTTATTGCTTCAGCTTTTAATTCATTTTGAATTGTACTTCTCAAAGTAATTATAGGCTAATTTATGCATTTGCTTTACCTGTCTTTTTATCAAGCTCAGGTTCTTAATGATTTTACTTGTCGTTCCTCAGAATTGAGTGCTTGCTCTGTTGTTTCTTTAAATTAGTCTGTTTGTGTCACATTTTTCTTCATATAGTCAATTAGTTCTAGGGATTTCGATGTCTTTGCTGTGATGGTGATGTTATACCATCGTTTTAGAATTTTTGAACTGATATGTTTAGAGGTAAGAAATTGTTCACTTATTGTTTTAAATAAAAGAAAGATACTGTCGTTGATTGTATGAAAAATACTATTGTAAAAGAAGCCACTGCGATTGGCAGAATCAGAATGGTGTTGTGATTAGGGGGAGGATAGCAAAAAGAGCGCAAACATTTTATCATTTTCGTTAATTTCCACCTGCTATTTCCTCAAAAGCTTCTTTCTTCCGTCTCCAACCAAACCTTAGTGCTTAATCACGCATAACCACAACACCTGTAGTTTCTCCTTGAAATGAATGCCATAAAAGAAGCCAGGGAATCTGTGCCATATACCTTAGTGAACAAATCTAGGCATAATTGAGAACTAATTGGTGGTGTGAAGTCCCGAATCTCTAAAACCCCAACAAACTGAATCTTCTCCAGAGCAAAAGTGGTGGCAGATATTCGATGTGAAGCTTCCATGGATTAAATTTTTGCTGCTTTCTTGAAGTGTTTGTTGCTCCTTATAGGATAGACTTCTGATCTTTGGATTTTCCCCTCACATTCATGTTCGTGAAGCCAGGTAGATCCCCTCTCTTAAAACAATTCTAGTTTAGAAAGAACTAAAATCTAATTGTTTTGACTAGTCTATGTATTCTAGTAAGTCATAATGCAAGCATATGTAGCCTCATTTATCCTATTTGAATGAAAGGATAGACATGAAAAGCTGGTAAACCTGTCGAGGTAAAAAAAGTTGGTGCTTTGTGTTAAATGTGGATTATGCTGTGTTAAACTCTCAAAATGGACTCTGATCAAAGTGTGAACTTCAAACCCAAAAGTTCTTATTTTCTATGTTTAGTAACCAGAAGAGAAATCATTTAGGCATTTCTTTTCCTCTATTTTCTGGATCAATGATGCATGCCACTGTTTTCTCACCGATCTAGTAGGTTGCTACTTCTGTGCACATAGTTTCTCAAGATTAATTATCTATCTGGAAGTTTCAGTGTTGATATAGCACTCAGTTATCTTATAGAAAGGGGTAATACTTATATTGCTGCCTTTGGTAATTGATACTGACATTTCTCATATCATAATTGGACTTTGGTAATTTATAATATACAAGTTATAGAATTGGAACAGCAATCAACAGTAGAACGAGAGAAGATGGTATTTCTTTTTTTGTAATAATAAACAGGAAGAAGTCTATACAGTTTCTTTCTTATTTATAGCTACCATTTAAATTTAATTATAATTATAAAACAACGTATGCATATCTATAATTGCATTTAATCCAAGTCCTAAATTCTATTAGAACAAGCCCAATGTGATCGCACTAGGTCCATTGAGTGCTGCTATGAGATTGAGGAAATTTTATTGAGCTTTCTTAATGGAAGAAACCAAGGTGACTGTAAATTCTCAGTTGATCGTGTCAACTCTCAAAGGAACTTCTGTAATGAATTTATGTTTTCTATGGGGTTGAGAAAACTGTGGACATGTTTATGTGTATTTGAAATTTCAGGCTGGTCACTTCAATTCCTTAGTGTTTTTCGCATGCTCAAGCAATTTACAATACGCCAAACTATTTACCATACTTATGCTGCTATTGTTATGTTTTTGGAATTCACAACTTGAGGATTGCTATTGTTATGATTTTGGTATTCACAACTTAAGGATACAGTTTTACATCCTATAAAACAGATCCTGTTCAAGTAAGGTCATTATTATATTTTTGGTATTGTAAAGCGATGAAAGGACTTTTAAGACATGTTGGCAATTTGAGATTTATTATCTTGGAGTAGAAATGGTAAAGCTGTAGATGTTGTTTTCTTGAATTGCTAGTTTGTCTAGAAGATTAAGGTTCTTCCTTGCAACTGTTTTCTTGTTCCTTCAAGTATATTTTATTCCCTTTTTTATCCTCTTGCATCTCAATTTTTAGTTATTGGTCAATATATTCGTGTTTTGTTTTATATTTTTTAATAAGACTATTGAGCAATTTTATTTAATCAAACTTTTTAAAGAGTTGAAATTGTGTTATTTCTTTTGAGTTTATCAATGCTATCCTATCCCTTTCCCCAGAAAACTAGTAGTAAGTCCTTTCAATGTCATTATCATCTGTCTAAAAGTGTGCTGTCCATTTCATTTTCTTTTCATGTTTTTCATTTCATCTGATGTAAATCCTAATCTGTGTGCTTTTTGGACTTCTTGAAAGCTATTGCATAGAAAAATGGAAGAAGTTTCTCCAAACTCCATTATCTTGAATTTCATATTAGTTTCCCATCAGATCAAGATTGATGTTTATATTTTTGGTCATATCACTTGTAATTCTCAGTAAGATAGAGATATTTCTCTTGTTCCTGTTTAGTAGTTTGACTTCAAATTCCCGTTCAACAAGTTTATAATAGGCACGTTTGTGCAAAGGAAATTGCTTGGAAAATTGCACATATTGCTGCTATGTCTTATCAATTGCTCACCTGCATATAGTACATTTGTCCCTTTACATAAACATATTCTTTGGTAGTAATCAGGTAACAGTGTGACTTTTTTTCTTTTATCTTTTATGTACATAGAATAGAATAGCATTTAATATATATATATATATTGAATTCTTGATGCATTTGCACAGACCTATCATTTACTTCGGTCTAGTAGAATTTAGATTGCAACCTTTCCAACTCTTCTGTCAAGCTAGATTTTTTCAAGGGCATGAAAGAAATGTGAACTTAGAGTCTCAGCTCGAAGTTCGACATCAGCATGGATGCAAAAAGCTTATCTGCAGTTCATCAGATGGTTCAAGTTGACCGCAAGCCTGCAATGCTTAGCTTCTTTGGACAGCCAAGTCATATAAACGAGCTTTAATAGACCATCTTTTTGATCTGGCCTAACATGATCCCTCCGTGCAGCAGAATGGAGATGTTGCAGGGATCGAGTAATACAACTTGAATTTTATTGTTCATCTGTGATAGTCTTTTCCTAGAGATAGAAATATGAAGTTTAAATTCTATCTTTTAACATTGGTTGCGCATGGCATGGAAATCGGGACAGACATTCATCTACAAGAAATTGTGTAAGTTTAGTTATTCGCTTTTGCGTTTCTTTTGTTTCTTTGTTTTCTTTTTTCACCTTCAGATTTTTTTCTATATGTAGAAGTGTATTACTATTAGGCAGGAGCTTCCCATGGAAGGTTTCTGGAAGTTTCTTCATTGCATTGTTTTCCATTCTTACTGGTTTTTATTCTATATTGGGCTCCTATAAGGCCCATTCCTGAATAGAGTAGCAATTAAACTCCTGGTCTTGCTCTTCTGTTCAATAATTATTTCTAAGAATGACATAACATTTTTGGATGCAATGTTTTGAAATCGTTCAGCATAATCATTCTCTCGGCAATTATTGTCTTTTGAGGATTAAAGAATCTATTTCTTTTCAATCTCTCATTTTCTGTTCTCCTCCGGTTTGGTTTGAGTCACAGAGTAAGATTGCATATTTCTAATTGTTTACGAGTAAGAATCTAATAGTGACAATATTTGCTGCCTATAATTATAGTTTCTGTCGCAGGGTGCAAGTGTTGGAACTACAAAGACATGCAACAGTTAAAATTGTCAACCATTCTTCTTAGCATAGAGTATCCCTCTCATTTATTAGTTGTGAAATTGATTTTTACTTCTCTTGAAGAAACTTGGCCATCTATAATCTAAATTAAATTTGCATATTCAATTTATTTTTACCATTGAGAATTTTGGGGGTTTTAGGAATATTTGGCCTTATTGTCTTGAATTGAATATCAATTCTTACTGCCTTAGATTACTTCAAATTTTAGTGAAATTCACCCCAGACCAAGTGCGTGAGACAATCCATGCAGGACAGTAGGAAAATATAAGTTTCCTGTACATTTATCTTCTGCTTTTATTGAGTTAATTTAATTTAGATGATGTAGCCTGTGAAAGGATTCAACATTGAGAGCCATCATCAGTTTTTTGACAAACTAGTAGTGGTTGGCGCACACATTTAGAGTTCTTGTCTAGGTACTTCTAATCCTTACCTTCCATCAGATGAACGCGGATGAACGGCTCACTTCACCGAAGAAAGAGCTGTGTGGGGGCATTTTCAAGTTGTGCTAAGGTACATCCACTTCTTCATGAGATGAAATTAGGAACGGTGGGAGTGGGGGGGCCGGAATTAGTATGCTTAAGAAGACATAATTATGCAACCCTTTTTCATTCTTTCATGGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTACAGATGCATTTGAAATGGGGCCAACATTCTCTCTCATACCCCATGTCTCTTCGCACCACCTCACCAACCGGGCACAGTTTCAAATATCTATTGGTCAAACACAGTGCGATGGAAAGGAAAAACATCCTTATATCTATATGTTCTGTAACACTGCCAGACAGACTGGTAATACTGTAGAGCACATATATGGTCCTTGAACCCTCATAAAACTCTTATTAATTTGCACTTGCAATTCCTTACCCTATTAGAAGAACAGAGCAACACTGTTTCTTAGCATATTTCCTTGTGTGCATTGTTTTTCAACTGCTGCATGAATATGTTCCCCACCATTACCCCTTCTCTATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAAAAAAAGAAATGGGAAAGGTTGAAAGAGAGAGAGAGACAGAAACCCACAAAAAAGGAAGCTTAAATATGCTCTTCTTGTATTTATGATTTTTATCATAATCTAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAGCAGGTGTTCGTGCTGTAAGGACCCACTGACTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGTTGAAACCTAAGAAGCCATATTGCTCTTTTGTATTGGACATAAACTTCAAGGTCTAATCACTTTGATGCTTTGAATTTGCTTTTGTAGGAACCAGAAACAAATATTATATGAATTACAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAATCACAAAACACTTTCTTGTCATCTTCATGATTTTTAAATCTCCTTTTGGTCCATCATGTCAGGTATTTTCTTTTTAAATTAATGTTTATCCTTTGCTACATGCTACACCATAATCAAAATGCATGTTATATGCCTCGGCACAAAGTGTTATACATCACCAGCCATCCAATCCTGGCCTCCAAAAGTAGCCGACCAACAGAAACTTAAAAACTCATCTTATTGGTGATAAAATGTGATTTGTGGCCTCAATCCCAGAATCCCATTGGCTGATTTTTCCTTTTCTTTTCCTTTTCCTGTCTCTTCCAATTTTTTATTTAATATTTCGAAGCAGCGACAATGACTTGCTAATGGTTTTTTCTTACCTAATCAGGAAGTGTACCTTAGTTGGTCTTTTGTTTGGTCACTGGAGTCATCATTATAGCTCTGACTTCCATTTTCTTATCTACGAAACAACGTCAAAATATTGGCAAAATGTTCCATAGATACATCTAATCCGAACCTCGCCTAAAGAAGATGTAGTGGTTAAAAGTAAAGATATCCTATAAAGTTAGAGATAAGATGTTTGATTAATGACTCCATTTGTTGGATAAACAAGAAGCTGAGTCCAGCTAGAACCCAGTTCTTGTTCTTAATTATCTTAGATTCTAAACCCTATTATGCTTTTTATTTAAAGCAATTTGATTTGAAATAACCTTTAATACTAATATTCAGTCATATTTTTCACTTTTCTTATTGTAGTCTGATAGGACAATAATTTGTTGAATAAATATTCTATTAATGTTTTCGAGTTTACTTGAAGCTTAATACAATAATCCCACAGCTCGAATTCTTCTGAATGAAGTCAATATTTAGTTAAATATAAAGGTGATCTCACTGTTGCTCGCAAAAGATGTCATTAATTCATATGAAATGAAAACAAAGCTATAAGAATCTCTAACAATTGATATTCTGACTAAAAGAGCTTCTTGTGTTGCAAATTAATGCTTGATGATTTGGATGTTCATCGTTAGCGTTTGATTTTATGTGAAGCTCTCCTGTCATAAAAATGTGTGATGCCATTTTTGACGATGTTTGGAAGCTTTTCTTTTGCTAGTTCCACAGCATAAACACGTGGATAACCTGAAGTCACTGTAGTTGACTGAAAAGATTCAATGTTAATCATAAATCTTTGGGGGCATTCTTGGCAAGGGACTGTGCACTCAAGCACACAGTGAAGAATAAAAGTGTACCATCGAGCTCCTTATCTCAATAAGTAACATTTTATAGTTTCTTTCACTGTATCCGATTTCTGCAGCAGCTTTGAGATACTGTTTTCATTTACATATTTAATGTCAGGTAATTGGCAAGGGGAGACAGGCCATCATTTGTAATAATGCTGATGATGATCCTGTTGTCGAGGAAAACATGCATGGAATGAACTACGTGTCGATATGAGGCAAATTAGCTTCAAGGGAATGGAGAGAGACTGGAAAGCATCGCAGAAATTAATCAAGTATCTGACCACCCTATTATGCTTGTTCTTTTTTTTAGTGGAGGAAGAATTATGCATGCACACCAACTTTAAATTACTGTTCTTTTGGTCGATTTAGACGAACATTTCTTTACTCTCCCTACCAAGTTTAAATTCATTGCATATCACCGAAAGAATTTTAACATAGTTGACGACAAAAGACTCCTCTTTTTTTCTTTTTTTCCTCTCTATATGTTATTCGGATGACCACCACCATAATTCTTCTTTCTTTATTGACTAAATATAGCATTTCAATTCTTGAACTATATACTATTTTTTCAATTGTCTTTCTTGAAATATTTAGGAGACTGAAGAATGATAATATATATATTTTAGGTAGGAAATGTGACATATATTTTGTCTTATTTTTTTCTTAGTATATAGAATTATTAATAACTGTGGATGTCAGAATAGTTCCCACTTCTCAGTATATTTATTTCTGTCTGAATATGTTTTGAAACATGTTATTGATATAATAATGTCAGACATTGCTTTGTTCCCTAGTAGAGACTGTTTTTACCTCATCATTTACACAGAAGACAATGGTATTTTTACATGTGAACCTTGGCATGTAAAGGAGGAACACCTGGAGGTATAGCTTAATTTCATCACATGCTTCATATTTCCACATTGTTTTTCTTGTTTGAACATGATTGTTGAAGGTCATTATTTGTTTGTTTTCTTCGTTGCTTTTTCTTGGATATTAATAATGAAAAGTGCCCCCATTGAAGCAGGTTAAAGCTGAGAGACCATCAAATCTGCCATGAATTGAAAGCTACGTGTCAATTTTTGGTTAGTTCTATTTTAATTCTTATTGATCTTTCAATAAAGCTTAGATTTAGTCACTATGACAGTTTTTCTTTGTTCATTTAAAAAAAAAAAAACAACTATTGGTTATCTTAATAAATTATTTTATTA

mRNA sequence

ATTCTTCTTTTCAATTAACCTTATCGTATGGGAATTCTCCGGAGATTTACTCTCAGCGGCTGCCGGCGATGATGAGAACGTCGGAATCAAAGCACCATGCGTCCATGTCTATAGAGGTTCAGTCCTACTTATTTCTCTCAAATTTGAAACTGAACTTCCTGATCTCCGATCCAGGGAGCATCATTTTGGGGCGCGAAGTGCAAGGTCTAGTTTGTGGATGATCCTTTTGGAATAATGGCGGCAGTCTCAGTTAAGCAATCGACTGCGGACAGTAATTACCTATCATTTACTTCGGTCTAGTAGAATTTAGATTGCAACCTTTCCAACTCTTCTGTCAAGCTAGATTTTTTCAAGGGCATGAAAGAAATGTGAACTTAGAGTCTCAGCTCGAAGTTCGACATCAGCATGGATGCAAAAAGCTTATCTGCAGTTCATCAGATGGTTCAAGTTGACCGCAAGCCTGCAATGCTTAGCTTCTTTGGACAGCCAAGTCATATAAACGAGCTTTAATAGACCATCTTTTTGATCTGGCCTAACATGATCCCTCCGTGCAGCAGAATGGAGATGTTGCAGGGATCGAGTAATACAACTTGAATTTTATTGTTCATCTGTGATAGTCTTTTCCTAGAGATAGAAATATGAAGTTTAAATTCTATCTTTTAACATTGGTTGCGCATGGCATGGAAATCGGGACAGACATTCATCTACAAGAAATTGTGGTGCAAGTGTTGGAACTACAAAGACATGCAACAGTTAAAATTGTCAACCATTCTTCTTAGCATAGAATGAACGCGGATGAACGGCTCACTTCACCGAAGAAAGAGCTGTGTGGGGGCATTTTCAAGTTGTGCTAAGATGCATTTGAAATGGGGCCAACATTCTCTCTCATACCCCATGTCTCTTCGCACCACCTCACCAACCGGGCACAGTTTCAAATATCTATTGACAGACTGGTGTTCGTGCTGTAAGGACCCACTGACTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGAACCAGAAACAAATATTATATGAATTACAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAATCACAAAACACTTTCTTGTCATCTTCATGATTTTTAAATCTCCTTTTGGTCCATCATGTCAGTTCCACAGCATAAACACGGACTGTGCACTCAAGCACACAGTGAAGAATAAAAGTGTAATTGGCAAGGGGAGACAGGCCATCATTTGTAATAATGCTGATGATGATCCTGTTGTCGAGGAAAACATGCATGGAATGAACTACGTGTCGATATGAGGCAAATTAGCTTCAAGGGAATGGAGAGAGACTGGAAAGCATCGCAGAAATTAATCAAACATTGCTTTGTTCCCTAGTAGAGACTGTTTTTACCTCATCATTTACACAGAAGACAATGGTATTTTTACATGTGAACCTTGGCATGTAAAGGAGGAACACCTGGAGGTTAAAGCTGAGAGACCATCAAATCTGCCATGAATTGAAAGCTACGTGTCAATTTTTGGTTAGTTCTATTTTAATTCTTATTGATCTTTCAATAAAGCTTAGATTTAGTCACTATGACAGTTTTTCTTTGTTCATTTAAAAAAAAAAAAACAACTATTGGTTATCTTAATAAATTATTTTATTA

Coding sequence (CDS)

ATGAACGGCTCACTTCACCGAAGAAAGAGCTGTGTGGGGGCATTTTCAAGTTGTGCTAAGATGCATTTGAAATGGGGCCAACATTCTCTCTCATACCCCATGTCTCTTCGCACCACCTCACCAACCGGGCACAGTTTCAAATATCTATTGACAGACTGGTGTTCGTGCTGTAAGGACCCACTGACTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGAACCAGAAACAAATATTATATGAATTACAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAATCACAAAACACTTTCTTGTCATCTTCATGATTTTTAAATCTCCTTTTGGTCCATCATGTCAGTTCCACAGCATAAACACGGACTGTGCACTCAAGCACACAGTGAAGAATAAAAGTGTAATTGGCAAGGGGAGACAGGCCATCATTTGTAATAATGCTGATGATGATCCTGTTGTCGAGGAAAACATGCATGGAATGAACTACGTGTCGATATGA

Protein sequence

MNGSLHRRKSCVGAFSSCAKMHLKWGQHSLSYPMSLRTTSPTGHSFKYLLTDWCSCCKDPLTILSSDKKRWAERNQKQILYELQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQFHSINTDCALKHTVKNKSVIGKGRQAIICNNADDDPVVEENMHGMNYVSI
Homology
[Close]
BLAST of CmaCh09G009070.1 vs. NCBI nr
Match: KAG6592004.1 (hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 117/167 (70.06%), Postives = 118/167 (70.66%), Query Frame = 0 

Query: 1   MNGSLHRRKSCVGAFSSCAKMHLKWGQHSLSYPMSLRTTSPTGHSFKYLLTDWCSCCKDP 60
           MNG+LHRRKSCVGAFSSCAK                              TDWCSCCKDP
Sbjct: 1   MNGTLHRRKSCVGAFSSCAK------------------------------TDWCSCCKDP 60

Query: 61  LTILSSDKKRWAERNQKQILYELQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQFHS 120
           LTILSSDKKRWAERNQKQILYE QALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQ   
Sbjct: 61  LTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQ--- 119

Query: 121 INTDCALKHTVKNKSVIGKGRQAIICNNADDDPVVEENMHGMNYVSI 168
                          VIGKGRQAIICNNADDDPVVEENMHGMNYVSI
Sbjct: 121 ---------------VIGKGRQAIICNNADDDPVVEENMHGMNYVSI 119

[Close]
BLAST of CmaCh09G009070.1 vs. NCBI nr
Match: KAG7024879.1 (hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.2 bits (487), Expect = 3.6e-45
Identity = 97/119 (81.51%), Postives = 98/119 (82.35%), Query Frame = 0 

Query: 49  LLTDWCSCCKDPLTILSSDKKRWAERNQKQILYELQALSLAMENRCFGITKHFLVIFMIF 108
           LL+  CSCCKDPLTILSSDKKRWAERNQKQILYE QALSLAMENRCFGITKHFLVIFMIF
Sbjct: 18  LLSIECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIF 77

Query: 109 KSPFGPSCQFHSINTDCALKHTVKNKSVIGKGRQAIICNNADDDPVVEENMHGMNYVSI 168
           KSPFGPSCQ                  VIGKGRQAIICNNADDDPVVEENMHGMNYVSI
Sbjct: 78  KSPFGPSCQ------------------VIGKGRQAIICNNADDDPVVEENMHGMNYVSI 118

[Close]
BLAST of CmaCh09G009070.1 vs. NCBI nr
Match: XP_038896213.1 (uncharacterized protein LOC120084489 [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 54  CSCCKDPLTILSSDKKRWAERNQKQILYELQALSLAMENRCFGITKHFLVIFMIFKSPFG 113
           CSCCKDPL ILSSDKKRWAERNQK ILYE QALSLAMENRCFGITK FLVIFMIFKS FG
Sbjct: 14  CSCCKDPLAILSSDKKRWAERNQKLILYEFQALSLAMENRCFGITKPFLVIFMIFKSLFG 73

Query: 114 PSCQ 118
           PSCQ
Sbjct: 74  PSCQ 77

The following BLAST results are available for this feature:
BLAST of CmaCh09G009070.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G009070.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G009070.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592004.11.1e-5470.06hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7024879.13.6e-4581.51hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038896213.11.2e-2492.19uncharacterized protein LOC120084489 [Benincasa hispida][more]
BLAST of CmaCh09G009070.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh09G009070CmaCh09G009070gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G009070.1:exon:1589CmaCh09G009070.1:exon:1589exon
CmaCh09G009070.1:exon:1590CmaCh09G009070.1:exon:1590exon
CmaCh09G009070.1:exon:1591CmaCh09G009070.1:exon:1591exon
CmaCh09G009070.1:exon:1592CmaCh09G009070.1:exon:1592exon
CmaCh09G009070.1:exon:1593CmaCh09G009070.1:exon:1593exon
CmaCh09G009070.1:exon:1594CmaCh09G009070.1:exon:1594exon
CmaCh09G009070.1:exon:1595CmaCh09G009070.1:exon:1595exon
CmaCh09G009070.1:exon:1596CmaCh09G009070.1:exon:1596exon
CmaCh09G009070.1:exon:1597CmaCh09G009070.1:exon:1597exon
CmaCh09G009070.1:exon:1598CmaCh09G009070.1:exon:1598exon
CmaCh09G009070.1:exon:1599CmaCh09G009070.1:exon:1599exon
CmaCh09G009070.1:exon:1600CmaCh09G009070.1:exon:1600exon
CmaCh09G009070.1:exon:1601CmaCh09G009070.1:exon:1601exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G009070.1:five_prime_utrCmaCh09G009070.1:five_prime_utrfive_prime_UTR
CmaCh09G009070.1:five_prime_utrCmaCh09G009070.1:five_prime_utr_2five_prime_UTR
CmaCh09G009070.1:five_prime_utrCmaCh09G009070.1:five_prime_utr_3five_prime_UTR
CmaCh09G009070.1:five_prime_utrCmaCh09G009070.1:five_prime_utr_4five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G009070.1:cdsCmaCh09G009070.1:cdsCDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_2CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_3CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_4CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_5CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_6CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_7CDS
CmaCh09G009070.1:cdsCmaCh09G009070.1:cds_8CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh09G009070.1:three_prime_utrCmaCh09G009070.1:three_prime_utrthree_prime_UTR
CmaCh09G009070.1:three_prime_utrCmaCh09G009070.1:three_prime_utr_2three_prime_UTR
CmaCh09G009070.1:three_prime_utrCmaCh09G009070.1:three_prime_utr_3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh09G009070.1CmaCh09G009070.1-proteinpolypeptide