CmaCh06G003250.1 (mRNA) Cucurbita maxima (Rimu) v1.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTTTTGTTGCTTAGTTGCAATCTAGCTCCACTTTTACTCATATTTGGTTGAAATTAAGGGATGAGGTAAATATGTTTTGTTATTCCCATGTTATGGATCCTATTTTTTTCATTGCTGGGGCTTGGTGCATTGAATTGCATGTGTCTAATCAAAGTCCTCTTTGGTTGGTGAACTTCTATTGTTCATCATGGGTGTTTGGACAAATTTTTTTAACTTTGAATCATGCCATTATGTGAATTACTTCCTACAATTTGTCCTAAACCTTCTGTAGCTTGTTGGCTTTGTGGGGAATTGAGAAAAAAGTCTTGGGGAATTCCACATGTTGCAGGTTTGATCCTTTTCGGTAGAGAGAAGGAAACCAGAAACAAAATTATTTCCTACAATTTGGCTGACAAAACCCCCCTGTTTTGGACTGAGTTAGAGCATTTCTGGCTTGTTCAAAAGCAACATTTGGTTACTTTCTTTCTTTCCCTCTCTCTCTCTCTCTCAAGGGAGAAACAGGAACTTTGAATTTTTCTCCTAAATCTTAAGTAGTGAACATTTGAATTTACTTTAGCACTGTATCTCCTTCTATTAGGGTGACTGGTGAAGATTGTACATTGCTTTTCTCCTTTCTCTTGAATCTCTAGATCTTGTTTATAAAATGGTGAAGATTGTACGGACGGTCAAGAAAGTTAGTGACCTGATGACAGGGGAGCTAGCGATCAAAGTCCCAGTGAATGGCGACTCTAACTATAACGGTCCTAAGGTAGCGAAATTCTTTGTCAGGTAAGTTCCAACCCGCACGCAAGGTATAACGGTCTGGGCATCGTCTCAGAGAGGAGCTCAATGAAATTGACATGTTTGTGAAGATGCAGACTACTTGCACCTGGACATAAAGACCCTGAAAAGCTTCACTGTTTCTTGAGATTGAAAAAAAACCGAGTCACGGTCGTAGTTTTTCAAAAGTTTTGTGTGGAATGATTAGGCTTTATGATTTAGAATAGGATTTCGAAGAAGCGGTGTGCATAAAACAGTAAAAGAGCTCTTCAAATCGAACCCTACTTCGGAAACACAAATCTGGGATGTTTAAAGTACGTGCTAAAAAACCGAGTCACGGTCGTAGTTTTTCAAAAGTTTTGGGTGGAATGATTAGGCTTTATGATTTAGAATAGGATTTCGAAGAAACGGTGTGCATAAAACAGTAAAAGAGTTCTTCAAATCGAACCCTACTTCGGAAACCCAAATCTGAAACGTTTGAAGTACGTGCTAAAAAAATCGAGTCACGGTCGTAGTTTTTCAAAAGTTTTGGGTGGAATGATTATATGATTGAGCCATATACTCTTAACCAAGGTATTAAAGATTTGAAAGAGATATTTGTATGTTTTTCTTCTTGTTTAACTTTTTAGAGTGGGTTCTACTTAGCACATAGAGTTTAGAACTAGTTTAAACTCTTAAACTAGTCATGAATAATACCCGATTATTATTGTTGATTAAAGTAGTCTTGATTTGCGTCTATTATTATGCCTAACTTTATTAAATAGTGTCCTTCCATTTGAAAATTGAAGTGGAGCACCATGGCATGCTTTTTAAATGTTTTAGGTCACCCCTTGCTTTCAACTTTTGTGGCTGTATGTCTCTTCCATGCACGACATAGCCCGTAACATCTGGCCTTTTTAATGCTCGGCTTCATTTTCTCCCTTCAAAGGACTTCGCTTCTTTTTCATTTTACTTTTACATTCTGAAGTGAGATACAGTCTTAGGTAGATGTAGATTCTCATGATGTAATAGTGTCTGTATTTGTTGGGTTTAAAAATGAATTTGAGTTTCATTTCTCTGTCATGTCGCATTAATTCATCTGGGCCATGCAATTGCAGAGGGTAAAGAACAAGTGGAGGCTTGGAGACCAAGAATTCCCCACAAGATACGACACAAAGGTTGGTCTATACATCTTCTTGGTTTCATGTGCCTCTTGATTGCTTAATATAGGACATGTCCATGATGATCTTTTTACCTGTAACTATCATCATTTCAGGTACCATTTAGTTTTTAGTTTATAACCTTTAAGCCAAGGACAGTTTTCAGGTCTCATTCAATGACCATTTTACTTTAAATTTTGGATTTTAGAAGATGAAGCTTATAAATCCTATTTCTATTCATGAATTCCTTGTTTCGATATTTACTTTTCTTACCTAACGTAAGTCAAATTTTAAAGAACTCGTTTTCGAAAACTTATTTGGTTGAAGTTTGATTAAGAATTCAAATGATCAGAAACAAATAAAGTTTTCACAAACAAAATAAAAACTAAATAAGTAATAATGAGATTACTTTTTATTTTATTTTATTATTCTTAACACTGAGAAATGATCTTTTGTTCTTTATTTTTTTGAAAAAAAAATCTTCAATGATTTAGTACAAAGTTTTTAAAAAATTTAAGTGGGTCTTTCCACTTTTTTTACCTTTTAGTTGATAATACATATCATTACCTTTCTAGTTCATAGTTTATTTTGTTTTGTTTCTGATAGAAATCCATATGTCTAAATGATGTTGCAATCTAGCTCCACTTTTACTCATATTTGGTTGAAATTAAGGGATGAGATTGTACGGACGGTCAAGAAAGTTAGTGACCTGATGACAGGGGAGCTAGCGATCAAAGTCCCAGTGAATGGCGACTCTAACTATAACGGTCCTAAGGTAGCGAAATTCTTTGTCAGAAATCCATATGTCTAA ATGATGTTGCAATCTAGCTCCACTTTTACTCATATTTGGTTGAAATTAAGGGATGAGATTGTACGGACGGTCAAGAAAGTTAGTGACCTGATGACAGGGGAGCTAGCGATCAAAGTCCCAGTGAATGGCGACTCTAACTATAACGGTCCTAAGGTAGCGAAATTCTTTGTCAGAAATCCATATGTCTAA MMLQSSSTFTHIWLKLRDEIVRTVKKVSDLMTGELAIKVPVNGDSNYNGPKVAKFFVRNPYV Homology
BLAST of CmaCh06G003250.1 vs. ExPASy TrEMBL
Match: A0A2K3LCH5 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g032188 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. ExPASy TrEMBL
Match: A0A3P6E4I6 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC143T45651Z PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 31/51 (60.78%), Postives = 34/51 (66.67%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. ExPASy TrEMBL
Match: A0A5N6MLP8 (Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.5e-05 Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. ExPASy TrEMBL
Match: A0A7J9AHP9 (Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_004117 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.5e-05 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. ExPASy TrEMBL
Match: A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.2e-05 Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. NCBI nr
Match: VDD26359.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 57.8 bits (138), Expect = 3.9e-05 Identity = 31/51 (60.78%), Postives = 34/51 (66.67%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. NCBI nr
Match: PNX76243.1 (hypothetical protein L195_g032188, partial [Trifolium pratense]) HSP 1 Score: 57.8 bits (138), Expect = 3.9e-05 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. NCBI nr
Match: KAD3640919.1 (hypothetical protein E3N88_30142 [Mikania micrantha]) HSP 1 Score: 57.4 bits (137), Expect = 5.1e-05 Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. NCBI nr
Match: MBA0723545.1 (hypothetical protein [Gossypium laxum]) HSP 1 Score: 57.4 bits (137), Expect = 5.1e-05 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of CmaCh06G003250.1 vs. NCBI nr
Match: VDD65689.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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