CmaCh06G003140.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003140.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Actin-depolymerizing factor
Location	Cma_Chr06: 1484670 .. 1486524 (-)
Sequence length	420
RNA-Seq Expression	CmaCh06G003140.1
Synteny	CmaCh06G003140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGTCCTCTGAAATTTTACAGACTCTGTTCTCTTTCATGGTTTGATGATCTGTTTAGTTCTTGAGAATGTTCGATTGCATTTCTAGTTTGCCTCTTTTGAAAATTACTGCACTCTAAGTTTCTTGCGTGTATTTCTGAAATTAAACGTGTGTGGAAGCTTTGAAGCTATGTTTTTAGATTTGAAGTTTTGATTTGCATGCAGTTTCATCGGCGATCCGACTTGAATTCTTCTGTGATTTTTTCAACTAAACGAAATGTTGTTTTCTGTAATTTATTATAAAATTTGAGTGATCGAGTGGCCGTGGATCTACAATGATTTGATCACTGTTTTTGTTACTGTACTTAAATTTTGTTACATTGAAATTTCTGTCAAGGCTTGCAGTTATAAGTTATATTAGTGTATTTCCCCTTTTTGAGTTGCTATTAATCACCCCGTGCATGTCGTTAATGAAGTGAAAACTCTGTGAAGTTGTGATGTCTACAAGGTGTTGGATGGAAGTCCATCCTCGCCTAATTCCCATAGGGAATGATCATGAGTTTATAATCAAGAAATACTATCCCCATTGGTTTGAGGTCTTTTAGGGAGCTCAAAGCAAATCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACAATTGTGGAGATCCATGATTCCTAACACAAGGGATCCATATTTTGGTTATGCCTTTGTTTTAAATTTTGGTGGAAATCAATATCAGGATATGGATAAAAGCTTGTGGGGGAAAATCTTATACTGCCCATATTCCTATGTTGCGCTATCATCTTATTTTGACTAAATATGACCAGATGATGATGTCTAAGGTGAAGATATCTGATTTAGCATGAGATGTTAGATAATTAGTCTATTTTAGTTAACATTAATTTTGCCATTAATTTTTTTCATCAATTAGTACCTTTTATTTTAGATTTAACTCGTTGTTTTTATTAATTTTATTGTAGAGCGATAAACAGACCCATTTAGAATTATAAAGGGGCTTTGGAATATTATTTTGAAATAGAACTTTTCTCTTACAGAGTGTTTTTTCAAGTTTTGGAATGGATTTGGCCTAATCACAAATCTGTTTGCATCACTATCAGGGGAGAAGCAAAACAATTTTTGAAATTTTGCGAAATATTATCAGATCAGAAAAATTCTCTATGTTCTGCCTTTCCAGTGTTTAGATTGAACACTATTTACCTCGTTGATTTGCTTTGCAGCCATTGGTTTTATAGATGTGTTATCAAGAACGTTTTAGTTTCCAATTTTGTTATGCCTTTTGAGCTTTTTCGTGCCTCTCTTCTGGATTTTGAAATTATATTAAGCAGTTTCCTTCTGCATTACATAGGCCAATGCAGCATCGGGAATGGCTGTGAATGATGATTGCAAACTGAAGTTTTTGGCGCTCAAAGCCAAAAGAACATATCGCTTTATTGTGTTTAAGATTGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGCGAGCCAACTCAAAGTTATGAGGACTTTGCTGCAAGCCTTCCTTCGGATGAATGTCGTTACGCTGTCTATGATTTTGACTTTGTTACTGAAGAGAACTGTCAAAAGAGCAGGATCTTCTTCATTGCCTGGTATAGCGAAGATCTCCTTTACTGCATTCCTTTCATGTTTTTCCTTTCAATTATCCCGCCCATAAGAAAACACCATTGATTATAGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCCAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGATTCCAGGTTGAGCTGCAAGCAACTGACCCAACCGAGATGGGTCTTGATGTCATCCGAAGCCGAGCTGGGTGA

mRNA sequence

ATGGCCAATGCAGCATCGGGAATGGCTGTGAATGATGATTGCAAACTGAAGTTTTTGGCGCTCAAAGCCAAAAGAACATATCGCTTTATTGTGTTTAAGATTGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGCGAGCCAACTCAAAGTTATGAGGACTTTGCTGCAAGCCTTCCTTCGGATGAATGTCGTTACGCTGTCTATGATTTTGACTTTGTTACTGAAGAGAACTGTCAAAAGAGCAGGATCTTCTTCATTGCCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCCAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGATTCCAGGTTGAGCTGCAAGCAACTGACCCAACCGAGATGGGTCTTGATGTCATCCGAAGCCGAGCTGGGTGA

Coding sequence (CDS)

ATGGCCAATGCAGCATCGGGAATGGCTGTGAATGATGATTGCAAACTGAAGTTTTTGGCGCTCAAAGCCAAAAGAACATATCGCTTTATTGTGTTTAAGATTGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGCGAGCCAACTCAAAGTTATGAGGACTTTGCTGCAAGCCTTCCTTCGGATGAATGTCGTTACGCTGTCTATGATTTTGACTTTGTTACTGAAGAGAACTGTCAAAAGAGCAGGATCTTCTTCATTGCCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCCAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGATTCCAGGTTGAGCTGCAAGCAACTGACCCAACCGAGATGGGTCTTGATGTCATCCGAAGCCGAGCTGGGTGA

Protein sequence

MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRAG

Homology

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-65
Identity = 122/139 (87.77%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKFL LKAKRTYRFI++KIEEKQK+VVVEK+GEPT+SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAVYDFDF+T+EN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDV RSRAG
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.9e-65
Identity = 122/138 (88.41%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQVVVEK+GEPT+SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P +ECRYAVYDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQA DPTEMGLDVI+SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 7.4e-63
Identity = 116/138 (84.06%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+D+CKLKFL LKAKRTYRFI++KI+EK+K VVVEKVGEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P++ECRYA++D+DFVTEENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTE+GLDVIR RA
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.8e-62
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-62
Identity = 116/137 (84.67%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL
Match: A0A6J1L3B8 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498729 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDVIRSRAG
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL
Match: A0A6J1G2E2 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450067 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDVIRSRAG
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL
Match: A0A6J1KUA9 (actin-depolymerizing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498729 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 19  ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 78

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 79  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 138

Query: 122 QATDPTEMGLDVIRSRAG 140
           QATDPTEMGLDVIRSRAG
Sbjct: 139 QATDPTEMGLDVIRSRAG 156

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL
Match: A0A6J1G2I6 (actin-depolymerizing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450067 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 30  ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 89

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 90  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 149

Query: 122 QATDPTEMGLDVIRSRAG 140
           QATDPTEMGLDVIRSRAG
Sbjct: 150 QATDPTEMGLDVIRSRAG 167

[Close]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL
Match: A0A6J1F4F4 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh06G003140.1 vs. NCBI nr
Match: XP_022945981.1 (actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >XP_023005853.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >KAG6596418.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 9.2e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDVIRSRAG
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh06G003140.1 vs. NCBI nr
Match: XP_023540242.1 (actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDN+RVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNARVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDVIRSRAG
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh06G003140.1 vs. NCBI nr
Match: XP_022971269.1 (actin-depolymerizing factor 1-like isoform X1 [Cucurbita maxima] >XP_022971270.1 actin-depolymerizing factor 1-like isoform X1 [Cucurbita maxima] >XP_023005851.1 actin-depolymerizing factor 1-like isoform X1 [Cucurbita maxima] >XP_023005852.1 actin-depolymerizing factor 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 19  ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 78

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 79  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 138

Query: 122 QATDPTEMGLDVIRSRAG 140
           QATDPTEMGLDVIRSRAG
Sbjct: 139 QATDPTEMGLDVIRSRAG 156

[Close]

BLAST of CmaCh06G003140.1 vs. NCBI nr
Match: XP_022945978.1 (actin-depolymerizing factor 1-like isoform X1 [Cucurbita moschata] >XP_022945980.1 actin-depolymerizing factor 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 30  ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 89

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 90  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 149

Query: 122 QATDPTEMGLDVIRSRAG 140
           QATDPTEMGLDVIRSRAG
Sbjct: 150 QATDPTEMGLDVIRSRAG 167

[Close]

BLAST of CmaCh06G003140.1 vs. NCBI nr
Match: XP_023540241.1 (actin-depolymerizing factor 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 6.0e-70
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 19  ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 78

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDN+RVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 79  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNARVRSKMIYASSKDRFKRELDGFQVEL 138

Query: 122 QATDPTEMGLDVIRSRAG 140
           QATDPTEMGLDVIRSRAG
Sbjct: 139 QATDPTEMGLDVIRSRAG 156

[Close]

BLAST of CmaCh06G003140.1 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-63
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CmaCh06G003140.1 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-63
Identity = 116/137 (84.67%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmaCh06G003140.1 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 237.3 bits (604), Expect = 7.6e-63
Identity = 116/137 (84.67%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  SDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           +DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRA 139
           QATDPTEM LDV RSRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of CmaCh06G003140.1 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKF+ LKAKRT+R IV+KIE+  KQV+VEK+GEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+D+CRY +YDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDG QVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

[Close]

BLAST of CmaCh06G003140.1 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-59
Identity = 109/130 (83.85%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 8   MAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRY 67
           MAV+DDCKL+FL LKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASLP+DECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPT 127
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMGLDVIRSR 138
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:

BLAST of CmaCh06G003140.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	2.7e-65	87.77	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9FVI2	7.9e-65	88.41	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q0DLA3	7.4e-63	84.06	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	2.8e-62	84.78	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9ZSK3	3.7e-62	84.67	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]

BLAST of CmaCh06G003140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L3B8	4.5e-71	100.00	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G2E2	4.5e-71	100.00	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KUA9	1.3e-70	100.00	actin-depolymerizing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G2I6	1.3e-70	100.00	actin-depolymerizing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1F4F4	4.2e-69	96.40	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017...	[more]

BLAST of CmaCh06G003140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945981.1	9.2e-71	100.00	actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271...	[more]
XP_023540242.1	2.1e-70	99.28	actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022971269.1	2.7e-70	100.00	actin-depolymerizing factor 1-like isoform X1 [Cucurbita maxima] >XP_022971270.1...	[more]
XP_022945978.1	2.7e-70	100.00	actin-depolymerizing factor 1-like isoform X1 [Cucurbita moschata] >XP_022945980...	[more]
XP_023540241.1	6.0e-70	99.28	actin-depolymerizing factor 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh06G003140.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	2.0e-63	84.78	actin depolymerizing factor 1	[more]
AT5G59890.1	2.6e-63	84.67	actin depolymerizing factor 4	[more]
AT3G46010.2	7.6e-63	84.67	actin depolymerizing factor 1	[more]
AT3G46000.1	2.1e-60	81.02	actin depolymerizing factor 2	[more]
AT5G59890.2	1.3e-59	83.85	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 4.6E-59 score: 212.2
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 3.1E-37 score: 127.1
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 7..139 score: 39.218735
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 2.0E-53 score: 181.6
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 1.59184E-65 score: 193.542
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G003140	CmaCh06G003140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003140.1:exon:2363	CmaCh06G003140.1:exon:2363	exon
CmaCh06G003140.1:exon:2362	CmaCh06G003140.1:exon:2362	exon
CmaCh06G003140.1:exon:2361	CmaCh06G003140.1:exon:2361	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003140.1:cds	CmaCh06G003140.1:cds_3	CDS
CmaCh06G003140.1:cds	CmaCh06G003140.1:cds_2	CDS
CmaCh06G003140.1:cds	CmaCh06G003140.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G003140.1	CmaCh06G003140.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003779	actin binding
molecular_function	GO:0051015	actin filament binding