CmaCh04G019470.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G019470.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
Location	Cma_Chr04: 10726757 .. 10736006 (+)
Sequence length	395
RNA-Seq Expression	CmaCh04G019470.1
Synteny	CmaCh04G019470.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCGATTATCAGGAGTCTGTTCTTCAACTGAGATATTCACACTCAAGCTCACGAACCGGAGACGACGGGCGAAGAAATCAGATCGATATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGTATGACGTCATTCCTTAATCAGGTTCGCTCAAATCTTCTTAAACGTTAGTGATTCTATTGATTTCTTGTTATTTTTACCGTGTCATCGATTTCTCATGATCTTGGTTCGAATGTTCAAAGTTCTATGTTTTCTTTTTCTCCTTTCGTATTAGGGCTATGATCTTTCTGACCTGAGACCGGATCGTGGATTGACCCCTATAGCATGATTAGATTATATTTTTCTCTTGATTTATGTTGGAACGGGTAAGAAAACGCATAAACTTATGGGTGAAGGCGTTTATGAAATTCTAGTATGACTTACACGTAGCAATTTGTGTGCAATATACGCCAGAATTGGAGGAATGAAAAAATTTGGGAATTTTTATGAAGGAAGAGCTGTTCTTCTGGGCTACCTAAAGTAAAGTAAAATAAGAAGATCATTATTTCCCAAGCTCGGGTGCTTGGGCACTACTTAGGGAACCAGTTATTTCCCCACCTTTGTCAATGAAAATAGAAACTCCTAATTGGTGGAAACAATTGGGCAAATAGTAAATCTTTCTCTAAAAGACCAAGGACCTATAGTGGGGTCTTGTTGTATTCACTTGTGCTTTATGAAATGAACCTACTCGATTGACTACTTGAGATAGGTCCATTCATCATTTCTTCTGGTCTGCCTCAAAACTCTCAAAGTTCACTTGGAACTTCTTATTGTGAGAGGGTATGTGCTCTTTTAGTTCTACTACTATGCTGCATTTGTTCAAATTTCTAAGGTCTTATAGTAGTATATTGTGTAAGCTTGTGCAGTAGGAAATTCTGTTTTCTAGGATAGTTAAAAGAAAATTATAAATGATTCACACCCCACAAGCATAATATTCTACCATTTTAAATTAGAAACTTTCACCATCCTAAGTGCAAATGATGCTCCAAAGTTACACAACTTATGTGAGTCTATTTTTCAACGGTAAAAGGATCATTATCATTTATCACAGCGGCCACACAAGCTTTCCCATTATTTAATCTATGCTCACAGTGCTTGTTCTTATTGTGTATTAGGAAATTTCTAAGAATTCCTCCCTCAGACGGGTCAAAAGAGTGCTTGTTATATCAAATAGGAGATTATCAAATTTACTTGTCTACTTTTTTAATCTTCACTACTTATTTCTTGATTCTGGGAACTCTAAAATTTTAGTGATGAAGCTTCATATGAAACTAAATTTTTATGATGTAGTAGAAAGTTACAAATAGTAAAAAACAACCCCCATTGCACTCTGTTTAAGAAAAGATTGCATCATAGCAGTTTCTGCAAAAATTATCTCCAAATAGACAACTTCCAACCCAGACCCAGAGCCTCTAGGAAAAACTTTCCCATCTTGAATTTATTATAGTATAGAGAAAGAATAACAACAGAACTCTCTTTCTAAAGAAACCCAAAATGAACTATTTTCTTTGCAACATAGTACCACCTCCAGTCTACAATCAATGCCAAAAAGACCTCAATAAATGGTCTATTATTCCTTTCCAACCAAATATTTAGTTTGAGGGATTGTACAGCATTGATCGAAAGCTTCTTTACTATTCCTTTGATCCATATTCTTAAAAAAAAAAATTGCTTCTCATGTTTTCTTTATTAAAGAATGATGAAAAAACCCCAAGAGAACCCCAACATTAGAAATAAAGAGTTACACATTTTCTTGCTAAAAGAGCGTAAATCAAATAAGAGCAATGTATCCACATTGAAAATTGTTCTCAGACAGTGTACTCAGGGTACACTCATGTGATTGCACATAGCAAGTGGTTGAGTGATATCTTAAGCGAGCATGTTCAATAAGGCACTTCTTTTCACTCACAAATGAAGAGGAATCAAATAAAGAAGAAGAGGGGGAGAGGAGAAGGAGGAAGAGTTAGAAAAAGAAGAAGAGTGGGAGGCTGAAGAGATGGGAAAAGAAGAAGAAAAGAGGGAGGAGGAGACAAAGTCAAAAGGCTCATTCTTACATTTGCTAGAAGCACTAATGAAGTGCTAACTACATGGCATTTGAATTGTCAAATGACAATATTCCTCGAATAAATGCTCGGGTTTTTATTTACAACTTTGTTGAAATGGTTGCTTGAGGCACAAGACATGAGGTTGTTTTTATACAAAATAAAAGACTTGTTGCTTATTTTAATGATGTTCTTTTGGAGTGGTACACCGAAAACTAACTTATGAGAGCTTGTTGTCATTGCTTTAGAACTACAAAAAATGGAGATATCATGTTTTGGGTAGGAGCATTGGATGATTTATCAAGTTCATCTTCATTGTTTTCTTTTTCAAGCTTTTCAATCATCCATTCTTACTTGACCCCATTATCATTAAAACCTTTATTCTTTTCTAATGAAGAATCAAACTTTCTCTGAGGAAAAAATGAAAGAATACAAAGGTTTCCTAAAAAACAAGTGTGCAAAAGAAAGATTTGCTAAAGGAAAGGATTCAAAATGAGTGAGCCTAACAAATAGTTACAAAAAGACTTCATCATCAACCCAATTGAGAAACATTGAACTTATCTAGGGAGTAGAAATCACAAGGGCCTCTCTCCACTCTAAAGATTCTATTGTTCCTTTCCTCCTTACATAACCCATAATAAATCACACACGTTGGCTTGCCACAAAAACCTCCATTCCTCTCAAAAAGGCAAATGAAGAAGGAACTTTTCAACATCTCCCTCTGGCTCCCTAAAGGCCCAACAATAAAAATACTCGATATAGATTGAGAAAAGTTGCAATTTCTTAGATATGATCTAAGCTTTCCTTTGCCTTTTGACAAAGAATGCAACGGAATGGTAATTTGATCAAAGAAGAAAACTTGATCAGAAGCCAATTTAACATGCTCTGATAAGGCAACCTCCTCAACCTGACGATCCAAGCTTTTGTTGAAGTTAAAACCCTTGAATCAAAGAAATTAACACCTTATACGAAATTCGGATCAACCAAGAGATAAAGCTAGAATTAAACTTGATCAAGGCTTGATTGAATGACTCGGATGCAACCTACCACAAGAATTGCATGAAACTTAGAAAGGACAATCGAACTTGATCAAGACTTGATTGAATGGCCCGAATGAAATCTACCACAAGAATTGCATGAAATTTAGAAATGACAAAGATGCTTAAATTTCTAAGGGTGAAAGTCTCAACTTGAGAGCTTAATTTCATTCATAAAAAGTTTGTTTTTTACCTACTAATTTGTGGGTATTTATAGTCTCTCCACAAAAGAAACTTCCAACTCTAAAAATGTTCACTAAAAGATGTTAGTGGCCATGATTGGTAAGTTACTCCCCACTGCCCTTCAAATGCCCACTAAAAAAGAAGTTAAAAGGCCATTTTGATGAGTAACTTCCGACCCTTTTGCCCACTCCAAGAAGTTATGGAATTAAAATAATAAATAAAGTTTGCGAATAAATTATCAATCAAGTGATATTTATAGCAACTCCATGCTCCACTTCAATTGTGCAAATATTCACTTTCGAAGCTCCAAATGTTTCTTCCTCAATCAAATTAGCTTGTAACACATGAAATAAAAGTTGAACTGAGCCTATCCAATTTTCTAGATGAAGAATGAATGCTTGTTGAATTTTCTTGGCCTTGGATCTTGTAATAGGTCTAGTTGGAACATTTGGAACACCGTGATCCAAGGCCAAGAAGATGCATTTGTTTTTGGAAATTTTACATTCTATGAAGATAAGAAAACATACTCACTAGACAAACCCCTTGTAGGATCAGTACTCCAAAGGCAAAAATCTGAACTCTCCAATCAATGATAAGAGAGCCATGACATTCATCGTTTTCTTCTTGGACAATGAACGCTAGAAACCAAGTGATAAAAAAGGAGAGCTCATAGATTGAACGACGTCAACCACAAAATAGTTTATGTAGATGTCAAATAATACAAACGAGGAAATGTAATGCAAAGTGGTCAATCCCCCCACCCATTTATCATACAAAACGTATGTTTCCTTCCGAACATAAGAAAAAGTGTACCAAGTGAGAAAAGAAGGGAGCTCATTGGATATTTCTCTCTACAAGTTTGTGCCTTTAAACTCCTTAATTTTAACCTCCAAGGTTCACCAGCTTCCCCACCACCTCCCAACTCGCTAAATGAGCACCTTTCCCCTCTTCAATCTCTTTCTGTAAAAAGTCCCTCCCAAGCTTCTCTAAATTATTGCAAACAGAATAGGGAAGCTTTAAAAAGGAGAAAAAGTATAAACCATAGTAGGTTTGTCACCGTCAACAAGCCTTAAAACAAAAACTAAGAGTCTTGGTGTCTTTAAACTATGCACAACTGAGTATCTAAAAGATGATATCAAAACAGTGTCAGCTCTGCTTTCTTACCCTTTGGTTCCTTTGCCCGTCTACAATTTGTCTATATCTCATAAATGAGCATTTTCCTCAAATCAGCTTTATTCCTATGAATATTTGCTAGTGTAAGGTGAGGTCACAAAACAGGTAGTAGTTCGTCTTATCAATCTACGGTGATTTGTGGAACTCTCATCTTGTTTAGCACATACATGTGGTGATAAATAGGACTACTAAGTGCCACAACTCTTGTAAGACACCTTTGGTCCTTTCCAACATCTTCCATAATTAAATCTGAATAATGAACAACACATTGCTTCCACTACATAAATAAATGGGGCCGTTTTGCTTTTAAATATTTTCTAGCTCGGTTGAGATCTATAGCAATGCAGATTACATTTTCTTCTCCAATTTTCTCCACCATGCCATGGCATCTGAGCAGTTCAAATCTATTTTCATCGAAATTGATGTTGGAAGATGCATCAATGGATTTCAAAAAAAAATTTCAGCAGAAAGATAAACTAAAAAGATTATTAGAGTTTTGTCCTTCCTATTAGTTCTGACTCTGCTGAGATCAATGAACAACCACTTTTTTCCTTTCAACCTCATGACTAGTTAATAGATCATTTGTGAGTTCTACTTTCTTTTCCAAATAGGTTACTCTAGCCTCATAATAAGGAGATATCAGACTGAGACCAAATTGCCCACAACTTCTAGCATCACATGAAAACTTCTTTAAGCGAATAATACTTCTAGGATCAAATGAAAACTTCTTTAAGTGAATAATGCTGCTTGATAAATACGACATGTGATGAATTGTATTGTTCTATCCTTCCCCTCTTAGTTCTATAAAATGGTTGTTTGCTCAAGCTGTTTCAATCTATTTCTATCATTAACAAGTTTATTCGAATGTGGACAAACAAATTTATGCAAAGCCCCACTTTTCCATGGTGGCTTTGCTTTTGATCGAGATTGACGTTCAGAGCTGGAACTAGCTCTTTCTCTTCTTCCTTAACACATTGCAACTCATGGTTATTTGCTTTCTAGATGTTCCACATTTTTACCCCCAACCACTTTCATTACATCCTCCTTTATCTTTTTCATCACATCCTCCTTTAAATCAATAAGCATCATAGCTTGAGAGGGCATTACTCTCTTCCCTCTTTGCTTTTGACCTTATTTGGTACTGTTTCATTTCATCTCTTACACTTCAAACATGCTTTTATACATTCCTATTTCCTCAACTAAATGTGCTGCTCAACGAGTGCTACCTTTGAGAATTTTTTTGCAAATATAAATTAGCAAGTGCTTGTATCCTATTCATTTCCCCAAAGGGCATGTTTCTCCTCAAGAAGTTTGCATTTTTACTCCACTTCTCCCATCTCACTGTAATACTATATTTTTATAATTTAATTATTTAAATAGAGGATTCAATAAATTGTCTCTTATTAAAAAAAAAGATTGAGGATTCAGCAACAACCTTAAAAAAAGGCTCAAGAGAGATCCTTTTGGGATGTGGTATTCCCGATGGCATTTGGAGTGTTTGTTTTTAGGCATTTAACTTTCGTACTACCTGCTCTTAGAGTTGTAAAGAGACAATTGAGGAGTTTCCTCTTTGTTTGTTTTTCATGAGAAAAGGTTTTTCATACATCTCCTTTTTGTATGGCTTGCTCGTTAGGCCTCGAGGACAGTTTTGCTCAAGGAACTTATCTCTTTAGAGGAAGTTAAAAAGGTTGTTTTTGGGTTGGATAGAAACTAAGCTCGTGGACTAGATAGTTTTTCTTTGGCCTTTTTCCAAGACAACTGGGAGCGTATCAAGATGATTTGTGGAAAGTATGTAGCGAGTTCCATGAGAGAGACAGTTTAGATAAATCGTTACATGAAACTTGATACGAAATAAGGCGTCTTAATCATGTCAGAAAGACTTTAAGGTGGATGATGGAGTTTGTACCCTACTTGCTGTTCCTGATGACAAAATAGAGTTGCATTTAGTGAACTCAATTGCAACTCATGCTTCATTAAAAACAAATCAAGTTTCATTTATGGAAATAGTACCCCAATCTATTGCAAACCACTTCAAGAAAAGCTTTAATTACTTTCAGATAGGTTACAAACTTTTGGTTGACCGATTAACATATTAACTCTCGGACTTAGTGAGGTTTCATTGTATTTTTCAATGTTAAAATATTATTTTCAATGTTTTAGGTTATAGTTTTGCTGTGGCCATAATGATATTGATGGGTGTGAGAGTTACAACCTTTCAATTGACAATGAGTTATTTTCAAGGTGGTTATAAATAGTCATTTCTGTTGCTTTATAATTTAGATTTTGGATATTGTAATGAAAGTGGTATATTTTGCTTCTTAGAGCCAGAGTCTTTGTGGCCCATGATTGTTGTACATAAATGTGTCTGTTTCTAGGCTGGTCATTCCTGTGGTCTCCAGATGCACATTTAGAAGTCCTTAGAAAATCACCCATTGCTTACCTTGTTTTATTAATGAATTCAAATTCTTGGTGGTTAATGGGGCTTGCATTCCGCTGTGGAAAGATTTGTGGTTCAATTAGTGCTATGGATGATTTCCTCCTCCATTTTGATTTTGATTTTAGAGTGCCTCTTTGAGATGCTGTGTTTGAAGACTTGTCTTAAACTTTTTGTGTTACAAGCTATTTGTCTCGTGTTATAAACATTAGCAACTCATGTAGGTGGGTCTTGAGTCTTCGACATTTCTTATCAAGTCTTCTTTTCACTAAATTTCACATCCCATTTACCTTGCCCCCACCCTTCTTTCAATCTGATTGGTTAGCTAGAATTCCAAAGTTCAAGTTGTCTGAATGTCTATTTCCTTGGTATGTCAAACATTGAGGACTTTGTCCGAAAATCTTCTTGGTCTTGGGTCCCTAGTGGTCTTGAGTGAAGTAGGAGAGCTTTTAAAAATATAAGAAGTCGAGAGACTGTTTGGAGTAGGTGCATTCCATGTCTCTCTTTGGACATGCTCATCTAATGATTTTGATTATTTTTTATCCTTCGTATTCCTTTTCATTTGTTCCTTTGTTTTGGCCCTTCTATTTTGTAGACCTCTCTACGTTATTCTTCCGTATGACTTGATAAAAGCTAGTTTCTTATAATAATTTTTTTTAGGCATTTAACACTTTTTTTATAAATCTTTCTGTAGTCTCTGATTTCACAACCAAAACTATTTTTATTGCCTATGGTATTTATGTAGTTGGGAAAATCATGAGATTTATCCATATGTCAATTATTTTGTGTGGATAATTCAATCTATGTTCTCTTTAGGTGTTTGTGGTTGCCCTTGCTTTCTTATATTTGGATTAGGCTGTTGGGTAAAATATGCAATTGCTAAATAAGTGATTCAAGAGTCTTGAGGTATGGAAGTAATTTCCTTGGTTGAGGTTCTCAGCAGCGTGGGTTTTCCCTGCTTCATTACCTGACCTTCCATTTGAGTTGTTTTGAAGGGATGCTTTTCTTAAAATGTTACTGTTGAATCTCTTTGTTGAAAACCACGGAGGGTGGAAACATGAATTTGTCATCATTGGAAAGGTTTTGCTCCATATTTGGGGTGCAAATAGGGGAGAGATTTGAACCTTCGAAAATATATGTCTTAATATGCTTAGGTTAGAGAAATTTGGTAGGTTTTTGTCTTTCACTACAGTGATTCAAAAAGTACATTAAAAGAACATTTCCTTTATATTCATTCTTCAGAGGTGTATCACCATTTCTCGTGATGATATCCATATGTCTGACATGTTGATTCTAGTGGATTCTTCTTCTAGGAATTTTTTTTCAATTATTTCGAATGGTTTTATGTACCTTGATTTTGGAATCTCATTGGAACATTATTACTACATTTTTGTCTTTTTACTTGTCCACATCGAGCACATTAAAGATTAGAAGTTGATCTTACAACTTTGTTGCATAGAGAAAATGGGCTTGGACTGTTACATTAATGTGAAAATTCAAAATTTCTGGGTGTCAAATTATAAAATTTCTTGATTTACTTTGCATGCATCATGTGGAGTTACCTATTAACTGTTTCACGTAAATCTGACAGGAAGCCGTAAACTGCTGAGACGCGTGTCATGTTCACTATTTTCCGGCGCCAGCAATTGGTTGGCATTTGAAACTGTTTGGTCGTTTGTAAAAACTCTTAGTTTCTATTATCATCTTTCCAAACTTTAAATCTGTTGAGAATTCTCCATCAGCATTTGGAATAAAGTTATCCCTTACCAAAAAACGTGTAAACTTGATCCTTTGATTTCTTTGTTAAAATATCATCATGTTGATGTGTATTGAATCTTGAATATCATTTTGCTTTGTGGATTTAGTCTGATGTCTCAAATTTTGAAACTTTTAGTCGAGGTTTAGCCAGAGCACCTGATCTACTCAGGTTGATAATGTGAAATGAGATTGGAGGGGTTCACATTTTCACATTTTTCTTCCCCTGAGTTTATATTGGAATTTAATAATTTGAATGTATTTTTTTTTAACCTTTTTATTTAATTATTTGATTATGTTTTAGATTTTTTAGCGTCCAGGTTCAACATCTTAA

mRNA sequence

ATTGCGATTATCAGGAGTCTGTTCTTCAACTGAGATATTCACACTCAAGCTCACGAACCGGAGACGACGGGCGAAGAAATCAGATCGATATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATCGTCCAGGTTCAACATCTTAA

Coding sequence (CDS)

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATCGTCCAGGTTCAACATCTTAA

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANRPGSTS

Homology

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BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot
Match: Q9SKC9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-34
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

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BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot
Match: Q54V61 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC +E+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEEAKFKKGIPLIPK 93
          + R  +++K  ++EA+  K   +I K
Sbjct: 75 LYR--KIKKSEQDEAERIKREVVIEK 98

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot
Match: Q0MQE4 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes OX=9598 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot
Match: Q0MQE3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot
Match: Q0MQE2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX=9600 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL
Match: A0A6J1K1V5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111490278 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL
Match: A0A6J1EVU8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111436457 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL
Match: A0A6J1E0D5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charantia OX=3673 GN=LOC111025235 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL
Match: A0A0A0KMK8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.6e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL
Match: A0A5A7VND2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001810 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK K+GI LIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. NCBI nr
Match: XP_022930015.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata] >XP_022994625.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita maxima] >XP_023553585.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. NCBI nr
Match: KAG7032461.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. NCBI nr
Match: XP_022158769.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. NCBI nr
Match: XP_038892568.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIRE+EAK KKG+PLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREQEAKLKKGVPLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. NCBI nr
Match: XP_031741352.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucumis sativus] >XP_031741831.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]

BLAST of CmaCh04G019470.1 vs. TAIR 10
Match: AT2G02050.1 (NADH-ubiquinone oxidoreductase B18 subunit, putative )

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-35
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

The following BLAST results are available for this feature:

BLAST of CmaCh04G019470.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKC9	3.1e-34	72.55	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali...	[more]
Q54V61	1.4e-15	46.51	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis...	[more]
Q0MQE4	4.9e-08	39.76	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes O...	[more]
Q0MQE3	6.4e-08	39.76	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g...	[more]
Q0MQE2	6.4e-08	39.76	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX...	[more]

BLAST of CmaCh04G019470.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1V5	1.6e-46	100.00	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima ...	[more]
A0A6J1EVU8	1.6e-46	100.00	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschat...	[more]
A0A6J1E0D5	3.1e-45	97.89	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charant...	[more]
A0A0A0KMK8	7.6e-44	95.79	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus O...	[more]
A0A5A7VND2	4.1e-42	92.63	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var....	[more]

BLAST of CmaCh04G019470.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930015.1	3.4e-46	100.00	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata]...	[more]
KAG7032461.1	3.4e-46	100.00	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita ...	[more]
XP_022158769.1	6.3e-45	97.89	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia...	[more]
XP_038892568.1	1.8e-44	95.79	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida]	[more]
XP_031741352.1	1.6e-43	95.79	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucumis sativu...	[more]

BLAST of CmaCh04G019470.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02050.1	2.2e-35	72.55	NADH-ubiquinone oxidoreductase B18 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008698	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7	PFAM	PF05676	NDUF_B7	coord: 11..73 e-value: 4.2E-30 score: 103.2
IPR008698	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7	PANTHER	PTHR20900	NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT	coord: 1..95
None	No IPR available	PANTHER	PTHR20900:SF2	BNAC09G20920D PROTEIN	coord: 1..95
None	No IPR available	PROSITE	PS51808	CHCH	coord: 27..69 score: 13.253136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G019470	CmaCh04G019470	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G019470.1:exon:2293	CmaCh04G019470.1:exon:2293	exon
CmaCh04G019470.1:exon:2294	CmaCh04G019470.1:exon:2294	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G019470.1:five_prime_utr	CmaCh04G019470.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G019470.1:cds	CmaCh04G019470.1:cds	CDS
CmaCh04G019470.1:cds	CmaCh04G019470.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G019470.1	CmaCh04G019470.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005747	mitochondrial respiratory chain complex I