CmaCh04G019470 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G019470
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
LocationCma_Chr04: 10726757 .. 10736006 (+)
RNA-Seq ExpressionCmaCh04G019470
SyntenyCmaCh04G019470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGCGATTATCAGGAGTCTGTTCTTCAACTGAGATATTCACACTCAAGCTCACGAACCGGAGACGACGGGCGAAGAAATCAGATCGATATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGTATGACGTCATTCCTTAATCAGGTTCGCTCAAATCTTCTTAAACGTTAGTGATTCTATTGATTTCTTGTTATTTTTACCGTGTCATCGATTTCTCATGATCTTGGTTCGAATGTTCAAAGTTCTATGTTTTCTTTTTCTCCTTTCGTATTAGGGCTATGATCTTTCTGACCTGAGACCGGATCGTGGATTGACCCCTATAGCATGATTAGATTATATTTTTCTCTTGATTTATGTTGGAACGGGTAAGAAAACGCATAAACTTATGGGTGAAGGCGTTTATGAAATTCTAGTATGACTTACACGTAGCAATTTGTGTGCAATATACGCCAGAATTGGAGGAATGAAAAAATTTGGGAATTTTTATGAAGGAAGAGCTGTTCTTCTGGGCTACCTAAAGTAAAGTAAAATAAGAAGATCATTATTTCCCAAGCTCGGGTGCTTGGGCACTACTTAGGGAACCAGTTATTTCCCCACCTTTGTCAATGAAAATAGAAACTCCTAATTGGTGGAAACAATTGGGCAAATAGTAAATCTTTCTCTAAAAGACCAAGGACCTATAGTGGGGTCTTGTTGTATTCACTTGTGCTTTATGAAATGAACCTACTCGATTGACTACTTGAGATAGGTCCATTCATCATTTCTTCTGGTCTGCCTCAAAACTCTCAAAGTTCACTTGGAACTTCTTATTGTGAGAGGGTATGTGCTCTTTTAGTTCTACTACTATGCTGCATTTGTTCAAATTTCTAAGGTCTTATAGTAGTATATTGTGTAAGCTTGTGCAGTAGGAAATTCTGTTTTCTAGGATAGTTAAAAGAAAATTATAAATGATTCACACCCCACAAGCATAATATTCTACCATTTTAAATTAGAAACTTTCACCATCCTAAGTGCAAATGATGCTCCAAAGTTACACAACTTATGTGAGTCTATTTTTCAACGGTAAAAGGATCATTATCATTTATCACAGCGGCCACACAAGCTTTCCCATTATTTAATCTATGCTCACAGTGCTTGTTCTTATTGTGTATTAGGAAATTTCTAAGAATTCCTCCCTCAGACGGGTCAAAAGAGTGCTTGTTATATCAAATAGGAGATTATCAAATTTACTTGTCTACTTTTTTAATCTTCACTACTTATTTCTTGATTCTGGGAACTCTAAAATTTTAGTGATGAAGCTTCATATGAAACTAAATTTTTATGATGTAGTAGAAAGTTACAAATAGTAAAAAACAACCCCCATTGCACTCTGTTTAAGAAAAGATTGCATCATAGCAGTTTCTGCAAAAATTATCTCCAAATAGACAACTTCCAACCCAGACCCAGAGCCTCTAGGAAAAACTTTCCCATCTTGAATTTATTATAGTATAGAGAAAGAATAACAACAGAACTCTCTTTCTAAAGAAACCCAAAATGAACTATTTTCTTTGCAACATAGTACCACCTCCAGTCTACAATCAATGCCAAAAAGACCTCAATAAATGGTCTATTATTCCTTTCCAACCAAATATTTAGTTTGAGGGATTGTACAGCATTGATCGAAAGCTTCTTTACTATTCCTTTGATCCATATTCTTAAAAAAAAAAATTGCTTCTCATGTTTTCTTTATTAAAGAATGATGAAAAAACCCCAAGAGAACCCCAACATTAGAAATAAAGAGTTACACATTTTCTTGCTAAAAGAGCGTAAATCAAATAAGAGCAATGTATCCACATTGAAAATTGTTCTCAGACAGTGTACTCAGGGTACACTCATGTGATTGCACATAGCAAGTGGTTGAGTGATATCTTAAGCGAGCATGTTCAATAAGGCACTTCTTTTCACTCACAAATGAAGAGGAATCAAATAAAGAAGAAGAGGGGGAGAGGAGAAGGAGGAAGAGTTAGAAAAAGAAGAAGAGTGGGAGGCTGAAGAGATGGGAAAAGAAGAAGAAAAGAGGGAGGAGGAGACAAAGTCAAAAGGCTCATTCTTACATTTGCTAGAAGCACTAATGAAGTGCTAACTACATGGCATTTGAATTGTCAAATGACAATATTCCTCGAATAAATGCTCGGGTTTTTATTTACAACTTTGTTGAAATGGTTGCTTGAGGCACAAGACATGAGGTTGTTTTTATACAAAATAAAAGACTTGTTGCTTATTTTAATGATGTTCTTTTGGAGTGGTACACCGAAAACTAACTTATGAGAGCTTGTTGTCATTGCTTTAGAACTACAAAAAATGGAGATATCATGTTTTGGGTAGGAGCATTGGATGATTTATCAAGTTCATCTTCATTGTTTTCTTTTTCAAGCTTTTCAATCATCCATTCTTACTTGACCCCATTATCATTAAAACCTTTATTCTTTTCTAATGAAGAATCAAACTTTCTCTGAGGAAAAAATGAAAGAATACAAAGGTTTCCTAAAAAACAAGTGTGCAAAAGAAAGATTTGCTAAAGGAAAGGATTCAAAATGAGTGAGCCTAACAAATAGTTACAAAAAGACTTCATCATCAACCCAATTGAGAAACATTGAACTTATCTAGGGAGTAGAAATCACAAGGGCCTCTCTCCACTCTAAAGATTCTATTGTTCCTTTCCTCCTTACATAACCCATAATAAATCACACACGTTGGCTTGCCACAAAAACCTCCATTCCTCTCAAAAAGGCAAATGAAGAAGGAACTTTTCAACATCTCCCTCTGGCTCCCTAAAGGCCCAACAATAAAAATACTCGATATAGATTGAGAAAAGTTGCAATTTCTTAGATATGATCTAAGCTTTCCTTTGCCTTTTGACAAAGAATGCAACGGAATGGTAATTTGATCAAAGAAGAAAACTTGATCAGAAGCCAATTTAACATGCTCTGATAAGGCAACCTCCTCAACCTGACGATCCAAGCTTTTGTTGAAGTTAAAACCCTTGAATCAAAGAAATTAACACCTTATACGAAATTCGGATCAACCAAGAGATAAAGCTAGAATTAAACTTGATCAAGGCTTGATTGAATGACTCGGATGCAACCTACCACAAGAATTGCATGAAACTTAGAAAGGACAATCGAACTTGATCAAGACTTGATTGAATGGCCCGAATGAAATCTACCACAAGAATTGCATGAAATTTAGAAATGACAAAGATGCTTAAATTTCTAAGGGTGAAAGTCTCAACTTGAGAGCTTAATTTCATTCATAAAAAGTTTGTTTTTTACCTACTAATTTGTGGGTATTTATAGTCTCTCCACAAAAGAAACTTCCAACTCTAAAAATGTTCACTAAAAGATGTTAGTGGCCATGATTGGTAAGTTACTCCCCACTGCCCTTCAAATGCCCACTAAAAAAGAAGTTAAAAGGCCATTTTGATGAGTAACTTCCGACCCTTTTGCCCACTCCAAGAAGTTATGGAATTAAAATAATAAATAAAGTTTGCGAATAAATTATCAATCAAGTGATATTTATAGCAACTCCATGCTCCACTTCAATTGTGCAAATATTCACTTTCGAAGCTCCAAATGTTTCTTCCTCAATCAAATTAGCTTGTAACACATGAAATAAAAGTTGAACTGAGCCTATCCAATTTTCTAGATGAAGAATGAATGCTTGTTGAATTTTCTTGGCCTTGGATCTTGTAATAGGTCTAGTTGGAACATTTGGAACACCGTGATCCAAGGCCAAGAAGATGCATTTGTTTTTGGAAATTTTACATTCTATGAAGATAAGAAAACATACTCACTAGACAAACCCCTTGTAGGATCAGTACTCCAAAGGCAAAAATCTGAACTCTCCAATCAATGATAAGAGAGCCATGACATTCATCGTTTTCTTCTTGGACAATGAACGCTAGAAACCAAGTGATAAAAAAGGAGAGCTCATAGATTGAACGACGTCAACCACAAAATAGTTTATGTAGATGTCAAATAATACAAACGAGGAAATGTAATGCAAAGTGGTCAATCCCCCCACCCATTTATCATACAAAACGTATGTTTCCTTCCGAACATAAGAAAAAGTGTACCAAGTGAGAAAAGAAGGGAGCTCATTGGATATTTCTCTCTACAAGTTTGTGCCTTTAAACTCCTTAATTTTAACCTCCAAGGTTCACCAGCTTCCCCACCACCTCCCAACTCGCTAAATGAGCACCTTTCCCCTCTTCAATCTCTTTCTGTAAAAAGTCCCTCCCAAGCTTCTCTAAATTATTGCAAACAGAATAGGGAAGCTTTAAAAAGGAGAAAAAGTATAAACCATAGTAGGTTTGTCACCGTCAACAAGCCTTAAAACAAAAACTAAGAGTCTTGGTGTCTTTAAACTATGCACAACTGAGTATCTAAAAGATGATATCAAAACAGTGTCAGCTCTGCTTTCTTACCCTTTGGTTCCTTTGCCCGTCTACAATTTGTCTATATCTCATAAATGAGCATTTTCCTCAAATCAGCTTTATTCCTATGAATATTTGCTAGTGTAAGGTGAGGTCACAAAACAGGTAGTAGTTCGTCTTATCAATCTACGGTGATTTGTGGAACTCTCATCTTGTTTAGCACATACATGTGGTGATAAATAGGACTACTAAGTGCCACAACTCTTGTAAGACACCTTTGGTCCTTTCCAACATCTTCCATAATTAAATCTGAATAATGAACAACACATTGCTTCCACTACATAAATAAATGGGGCCGTTTTGCTTTTAAATATTTTCTAGCTCGGTTGAGATCTATAGCAATGCAGATTACATTTTCTTCTCCAATTTTCTCCACCATGCCATGGCATCTGAGCAGTTCAAATCTATTTTCATCGAAATTGATGTTGGAAGATGCATCAATGGATTTCAAAAAAAAATTTCAGCAGAAAGATAAACTAAAAAGATTATTAGAGTTTTGTCCTTCCTATTAGTTCTGACTCTGCTGAGATCAATGAACAACCACTTTTTTCCTTTCAACCTCATGACTAGTTAATAGATCATTTGTGAGTTCTACTTTCTTTTCCAAATAGGTTACTCTAGCCTCATAATAAGGAGATATCAGACTGAGACCAAATTGCCCACAACTTCTAGCATCACATGAAAACTTCTTTAAGCGAATAATACTTCTAGGATCAAATGAAAACTTCTTTAAGTGAATAATGCTGCTTGATAAATACGACATGTGATGAATTGTATTGTTCTATCCTTCCCCTCTTAGTTCTATAAAATGGTTGTTTGCTCAAGCTGTTTCAATCTATTTCTATCATTAACAAGTTTATTCGAATGTGGACAAACAAATTTATGCAAAGCCCCACTTTTCCATGGTGGCTTTGCTTTTGATCGAGATTGACGTTCAGAGCTGGAACTAGCTCTTTCTCTTCTTCCTTAACACATTGCAACTCATGGTTATTTGCTTTCTAGATGTTCCACATTTTTACCCCCAACCACTTTCATTACATCCTCCTTTATCTTTTTCATCACATCCTCCTTTAAATCAATAAGCATCATAGCTTGAGAGGGCATTACTCTCTTCCCTCTTTGCTTTTGACCTTATTTGGTACTGTTTCATTTCATCTCTTACACTTCAAACATGCTTTTATACATTCCTATTTCCTCAACTAAATGTGCTGCTCAACGAGTGCTACCTTTGAGAATTTTTTTGCAAATATAAATTAGCAAGTGCTTGTATCCTATTCATTTCCCCAAAGGGCATGTTTCTCCTCAAGAAGTTTGCATTTTTACTCCACTTCTCCCATCTCACTGTAATACTATATTTTTATAATTTAATTATTTAAATAGAGGATTCAATAAATTGTCTCTTATTAAAAAAAAAGATTGAGGATTCAGCAACAACCTTAAAAAAAGGCTCAAGAGAGATCCTTTTGGGATGTGGTATTCCCGATGGCATTTGGAGTGTTTGTTTTTAGGCATTTAACTTTCGTACTACCTGCTCTTAGAGTTGTAAAGAGACAATTGAGGAGTTTCCTCTTTGTTTGTTTTTCATGAGAAAAGGTTTTTCATACATCTCCTTTTTGTATGGCTTGCTCGTTAGGCCTCGAGGACAGTTTTGCTCAAGGAACTTATCTCTTTAGAGGAAGTTAAAAAGGTTGTTTTTGGGTTGGATAGAAACTAAGCTCGTGGACTAGATAGTTTTTCTTTGGCCTTTTTCCAAGACAACTGGGAGCGTATCAAGATGATTTGTGGAAAGTATGTAGCGAGTTCCATGAGAGAGACAGTTTAGATAAATCGTTACATGAAACTTGATACGAAATAAGGCGTCTTAATCATGTCAGAAAGACTTTAAGGTGGATGATGGAGTTTGTACCCTACTTGCTGTTCCTGATGACAAAATAGAGTTGCATTTAGTGAACTCAATTGCAACTCATGCTTCATTAAAAACAAATCAAGTTTCATTTATGGAAATAGTACCCCAATCTATTGCAAACCACTTCAAGAAAAGCTTTAATTACTTTCAGATAGGTTACAAACTTTTGGTTGACCGATTAACATATTAACTCTCGGACTTAGTGAGGTTTCATTGTATTTTTCAATGTTAAAATATTATTTTCAATGTTTTAGGTTATAGTTTTGCTGTGGCCATAATGATATTGATGGGTGTGAGAGTTACAACCTTTCAATTGACAATGAGTTATTTTCAAGGTGGTTATAAATAGTCATTTCTGTTGCTTTATAATTTAGATTTTGGATATTGTAATGAAAGTGGTATATTTTGCTTCTTAGAGCCAGAGTCTTTGTGGCCCATGATTGTTGTACATAAATGTGTCTGTTTCTAGGCTGGTCATTCCTGTGGTCTCCAGATGCACATTTAGAAGTCCTTAGAAAATCACCCATTGCTTACCTTGTTTTATTAATGAATTCAAATTCTTGGTGGTTAATGGGGCTTGCATTCCGCTGTGGAAAGATTTGTGGTTCAATTAGTGCTATGGATGATTTCCTCCTCCATTTTGATTTTGATTTTAGAGTGCCTCTTTGAGATGCTGTGTTTGAAGACTTGTCTTAAACTTTTTGTGTTACAAGCTATTTGTCTCGTGTTATAAACATTAGCAACTCATGTAGGTGGGTCTTGAGTCTTCGACATTTCTTATCAAGTCTTCTTTTCACTAAATTTCACATCCCATTTACCTTGCCCCCACCCTTCTTTCAATCTGATTGGTTAGCTAGAATTCCAAAGTTCAAGTTGTCTGAATGTCTATTTCCTTGGTATGTCAAACATTGAGGACTTTGTCCGAAAATCTTCTTGGTCTTGGGTCCCTAGTGGTCTTGAGTGAAGTAGGAGAGCTTTTAAAAATATAAGAAGTCGAGAGACTGTTTGGAGTAGGTGCATTCCATGTCTCTCTTTGGACATGCTCATCTAATGATTTTGATTATTTTTTATCCTTCGTATTCCTTTTCATTTGTTCCTTTGTTTTGGCCCTTCTATTTTGTAGACCTCTCTACGTTATTCTTCCGTATGACTTGATAAAAGCTAGTTTCTTATAATAATTTTTTTTAGGCATTTAACACTTTTTTTATAAATCTTTCTGTAGTCTCTGATTTCACAACCAAAACTATTTTTATTGCCTATGGTATTTATGTAGTTGGGAAAATCATGAGATTTATCCATATGTCAATTATTTTGTGTGGATAATTCAATCTATGTTCTCTTTAGGTGTTTGTGGTTGCCCTTGCTTTCTTATATTTGGATTAGGCTGTTGGGTAAAATATGCAATTGCTAAATAAGTGATTCAAGAGTCTTGAGGTATGGAAGTAATTTCCTTGGTTGAGGTTCTCAGCAGCGTGGGTTTTCCCTGCTTCATTACCTGACCTTCCATTTGAGTTGTTTTGAAGGGATGCTTTTCTTAAAATGTTACTGTTGAATCTCTTTGTTGAAAACCACGGAGGGTGGAAACATGAATTTGTCATCATTGGAAAGGTTTTGCTCCATATTTGGGGTGCAAATAGGGGAGAGATTTGAACCTTCGAAAATATATGTCTTAATATGCTTAGGTTAGAGAAATTTGGTAGGTTTTTGTCTTTCACTACAGTGATTCAAAAAGTACATTAAAAGAACATTTCCTTTATATTCATTCTTCAGAGGTGTATCACCATTTCTCGTGATGATATCCATATGTCTGACATGTTGATTCTAGTGGATTCTTCTTCTAGGAATTTTTTTTCAATTATTTCGAATGGTTTTATGTACCTTGATTTTGGAATCTCATTGGAACATTATTACTACATTTTTGTCTTTTTACTTGTCCACATCGAGCACATTAAAGATTAGAAGTTGATCTTACAACTTTGTTGCATAGAGAAAATGGGCTTGGACTGTTACATTAATGTGAAAATTCAAAATTTCTGGGTGTCAAATTATAAAATTTCTTGATTTACTTTGCATGCATCATGTGGAGTTACCTATTAACTGTTTCACGTAAATCTGACAGGAAGCCGTAAACTGCTGAGACGCGTGTCATGTTCACTATTTTCCGGCGCCAGCAATTGGTTGGCATTTGAAACTGTTTGGTCGTTTGTAAAAACTCTTAGTTTCTATTATCATCTTTCCAAACTTTAAATCTGTTGAGAATTCTCCATCAGCATTTGGAATAAAGTTATCCCTTACCAAAAAACGTGTAAACTTGATCCTTTGATTTCTTTGTTAAAATATCATCATGTTGATGTGTATTGAATCTTGAATATCATTTTGCTTTGTGGATTTAGTCTGATGTCTCAAATTTTGAAACTTTTAGTCGAGGTTTAGCCAGAGCACCTGATCTACTCAGGTTGATAATGTGAAATGAGATTGGAGGGGTTCACATTTTCACATTTTTCTTCCCCTGAGTTTATATTGGAATTTAATAATTTGAATGTATTTTTTTTTAACCTTTTTATTTAATTATTTGATTATGTTTTAGATTTTTTAGCGTCCAGGTTCAACATCTTAA

mRNA sequence

ATTGCGATTATCAGGAGTCTGTTCTTCAACTGAGATATTCACACTCAAGCTCACGAACCGGAGACGACGGGCGAAGAAATCAGATCGATATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATCGTCCAGGTTCAACATCTTAA

Coding sequence (CDS)

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTACAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAGTATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATCGTCCAGGTTCAACATCTTAA

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANRPGSTS
Homology
[Close]
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match: Q9SKC9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-34
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match: Q54V61 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC +E+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEEAKFKKGIPLIPK 93
          + R  +++K  ++EA+  K   +I K
Sbjct: 75 LYR--KIKKSEQDEAERIKREVVIEK 98

[Close]
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match: Q0MQE4 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes OX=9598 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match: Q0MQE3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match: Q0MQE2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX=9600 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEY-ELV 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+ + V
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  M--------ERMLQMQKIREEEA 82
           M         R+LQ +K RE++A
Sbjct: 97  MRMKEFERERRLLQRKKRREKKA 119

[Close]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match: A0A6J1K1V5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111490278 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match: A0A6J1EVU8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111436457 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match: A0A6J1E0D5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charantia OX=3673 GN=LOC111025235 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match: A0A0A0KMK8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.6e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match: A0A5A7VND2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001810 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK K+GI LIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]
BLAST of CmaCh04G019470 vs. NCBI nr
Match: XP_022930015.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata] >XP_022994625.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita maxima] >XP_023553585.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. NCBI nr
Match: KAG7032461.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. NCBI nr
Match: XP_022158769.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. NCBI nr
Match: XP_038892568.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIRE+EAK KKG+PLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREQEAKLKKGVPLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. NCBI nr
Match: XP_031741352.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucumis sativus] >XP_031741831.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of CmaCh04G019470 vs. TAIR 10
Match: AT2G02050.1 (NADH-ubiquinone oxidoreductase B18 subunit, putative )

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-35
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

The following BLAST results are available for this feature:
BLAST of CmaCh04G019470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SKC93.1e-3472.55NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali... [more]
Q54V611.4e-1546.51NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis... [more]
Q0MQE44.9e-0839.76NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes O... [more]
Q0MQE36.4e-0839.76NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g... [more]
Q0MQE26.4e-0839.76NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX... [more]
BLAST of CmaCh04G019470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K1V51.6e-46100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita maxima ... [more]
A0A6J1EVU81.6e-46100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucurbita moschat... [more]
A0A6J1E0D53.1e-4597.89NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Momordica charant... [more]
A0A0A0KMK87.6e-4495.79NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis sativus O... [more]
A0A5A7VND24.1e-4292.63NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo var.... [more]
BLAST of CmaCh04G019470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022930015.13.4e-46100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata]... [more]
KAG7032461.13.4e-46100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, partial [Cucurbita ... [more]
XP_022158769.16.3e-4597.89NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia... [more]
XP_038892568.11.8e-4495.79NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Benincasa hispida][more]
XP_031741352.11.6e-4395.79NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucumis sativu... [more]
BLAST of CmaCh04G019470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02050.12.2e-3572.55NADH-ubiquinone oxidoreductase B18 subunit, putative [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PFAMPF05676NDUF_B7coord: 11..73
e-value: 4.2E-30
score: 103.2
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 1..95
NoneNo IPR availablePANTHERPTHR20900:SF2BNAC09G20920D PROTEINcoord: 1..95
NoneNo IPR availablePROSITEPS51808CHCHcoord: 27..69
score: 13.253136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019470.1CmaCh04G019470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005739 mitochondrion