CmaCh03G003530.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003530.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 4219226 .. 4220012 (+)
Sequence length	201
RNA-Seq Expression	CmaCh03G003530.1
Synteny	CmaCh03G003530.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATAAATAGGCGCAGTGGGTGTGGCTGATGCGAAAGAATATCACAATTTCTTGTAATTCTTTTCCAAATTCTGCGTCTCCCAGAAAAAGAAAACGCCTCAAGAAGAATCGAATCCCACAGCACAAACTTCATTACTTCACTCCTTTTCTCTCTCATCCTAGAGAGAGAAAGAAAGAAAAAACGCCAAAAACTTAAACCCTTCTGTTTGTTACGATATAAATCATTCCTCTGCTTCCATACACAGTGCTAAAAAGCCCCTTTTTCTGAAGAAAAGCCTATTCGAAACTTGAAGAAACTACTGCTTCCCCTGTCAACTCTGTTTTTTTTTTATTTTTTTTTTACCCTTTTTAGATTCTCTGGCAGTCGCCGTCGCCGGCCGCCGTCTTTGGGTTGACCACCGCTGTAATGGTGGCGCATTAATTTCTGAGACTACCCTAGCTAACCCTTTTCGATTTCAGCTCGTTTATGGCGATTTGACCCCACAAAAGAAGAATAAAGTTCTTAAGGCTTTCCTCTGTTTTGAGATTTCTTGCTCTGTTTTGGACTGAACGATAAACAGATCTGTTTCTTTCTTTTTTGGGTGTTGAAGACAGTGACGTTTCGAGTAAGGTTTGTTGTTTGAAGGGAAAATTGGGGTTTTTTTTTTGTTTTGTTTTATAAATCTTTTTGTTTTCCGTTTTTGGATGATTTTGATTTGGGTTACTCTGATTTGGATCTGGGAACTTTGTCTTATATTAATGTCTTGTTTTGCGTTAATTTCCAACAGATCTGCAAAGATTTAG

mRNA sequence

ATGGCTATAAATAGGCGCAATTCTCTGGCAGTCGCCGTCGCCGGCCGCCGTCTTTGGGTTGACCACCGCTGTAATGGTGGCGCATTAATTTCTGAGACTACCCTAGCTAACCCTTTTCGATTTCAGCTCGTTTATGGCGATTTGACCCCACAAAAGAAGAATAAAACAGTGACGTTTCGAGTAAGATCTGCAAAGATTTAG

Coding sequence (CDS)

ATGGCTATAAATAGGCGCAATTCTCTGGCAGTCGCCGTCGCCGGCCGCCGTCTTTGGGTTGACCACCGCTGTAATGGTGGCGCATTAATTTCTGAGACTACCCTAGCTAACCCTTTTCGATTTCAGCTCGTTTATGGCGATTTGACCCCACAAAAGAAGAATAAAACAGTGACGTTTCGAGTAAGATCTGCAAAGATTTAG

Protein sequence

MAINRRNSLAVAVAGRRLWVDHRCNGGALISETTLANPFRFQLVYGDLTPQKKNKTVTFRVRSAKI

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh03G003530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G003530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G003530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G003530.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G003530	CmaCh03G003530	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003530.1:exon:879	CmaCh03G003530.1:exon:879	exon
CmaCh03G003530.1:exon:880	CmaCh03G003530.1:exon:880	exon
CmaCh03G003530.1:exon:881	CmaCh03G003530.1:exon:881	exon
CmaCh03G003530.1:exon:882	CmaCh03G003530.1:exon:882	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003530.1:cds	CmaCh03G003530.1:cds	CDS
CmaCh03G003530.1:cds	CmaCh03G003530.1:cds_2	CDS
CmaCh03G003530.1:cds	CmaCh03G003530.1:cds_3	CDS
CmaCh03G003530.1:cds	CmaCh03G003530.1:cds_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G003530.1	CmaCh03G003530.1-protein	polypeptide