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CmaCh02G015860.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA MEFLDEDAKPRFLFHCRANPSSAPELHIEPQSCKLFCSITVVLSSILLILSILFVQFEPFRSILIWMSLSLLLGPFAPISITGGDIRVGRGPILEIPDEESEMEDDSKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKVENRNGALGSSNNGVDFAIEEAEWDEGELKVLKKQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGDEDSYAQFLKKRKPMDKRIENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKAGNDI Homology
BLAST of CmaCh02G015860.1 vs. ExPASy Swiss-Prot
Match: Q9ASQ2 (Transcription factor MAMYB OS=Arabidopsis thaliana OX=3702 GN=MAMYB PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 7.4e-71 Identity = 163/316 (51.58%), Postives = 204/316 (64.56%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. ExPASy Swiss-Prot
Match: Q6P2Y3 (DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis OX=8364 GN=dnajc2 PE=2 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 8.3e-14 Identity = 55/189 (29.10%), Postives = 88/189 (46.56%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. ExPASy Swiss-Prot
Match: Q6NWJ4 (DnaJ homolog subfamily C member 2 OS=Danio rerio OX=7955 GN=dnajc2 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.2e-13 Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. ExPASy Swiss-Prot
Match: Q1RMH9 (DnaJ homolog subfamily C member 2 OS=Bos taurus OX=9913 GN=DNAJC2 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12 Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. ExPASy Swiss-Prot
Match: Q99543 (DnaJ homolog subfamily C member 2 OS=Homo sapiens OX=9606 GN=DNAJC2 PE=1 SV=4) HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12 Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. TAIR 10
Match: AT5G45420.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 268.9 bits (686), Expect = 5.2e-72 Identity = 163/316 (51.58%), Postives = 204/316 (64.56%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. TAIR 10
Match: AT3G11450.1 (DnaJ domain ;Myb-like DNA-binding domain ) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19 Identity = 58/181 (32.04%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. TAIR 10
Match: AT5G06110.1 (DnaJ domain ;Myb-like DNA-binding domain ) HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14 Identity = 64/254 (25.20%), Postives = 103/254 (40.55%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. TAIR 10
Match: AT5G06110.2 (DnaJ domain ;Myb-like DNA-binding domain ) HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14 Identity = 64/254 (25.20%), Postives = 103/254 (40.55%), Query Frame = 0
BLAST of CmaCh02G015860.1 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator ) HSP 1 Score: 55.5 bits (132), Expect = 9.1e-08 Identity = 23/72 (31.94%), Postives = 43/72 (59.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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