CmaCh02G015860 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G015860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	dnaJ homolog subfamily C member 2-like
Location	Cma_Chr02: 9023256 .. 9024188 (+)
RNA-Seq Expression	CmaCh02G015860
Synteny	CmaCh02G015860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA

mRNA sequence

ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA

Coding sequence (CDS)

ATGGAGTTCCTGGATGAAGATGCGAAGCCCAGGTTCCTCTTCCACTGTCGCGCCAATCCATCTTCGGCGCCTGAGCTCCATATCGAACCGCAATCCTGCAAGCTCTTCTGCTCAATCACCGTCGTACTATCTTCCATTTTACTCATTCTCTCAATTTTGTTCGTCCAGTTCGAACCATTCAGATCTATTCTTATCTGGATGTCTCTCTCGCTTCTACTCGGCCCATTCGCTCCCATATCCATTACCGGCGGCGACATTCGAGTCGGTCGAGGTCCGATTCTCGAAATTCCAGACGAAGAATCCGAAATGGAGGACGATTCAAAGACGAAACCAGTTCAAAAGCGCTCAAAACCGCGCAGATCCGGGGAAATCGCCGCTGGTGTAATTGAAGTTGTCGAAAAGGCCTCTTCAAAAGTGGAGAACAGGAATGGAGCTCTTGGGAGTAGCAACAACGGTGTCGATTTTGCGATCGAGGAGGCGGAGTGGGACGAAGGGGAATTAAAGGTTTTAAAGAAGCAGTTAGCGAAGCATCCTGTGGGGAAGCCGAGGCGATGGGAGATAATTGCAGAGGCATTTGGCGGGAGGCTTAAAGTGGAGAGTGTGATCAAGATGGCTAAGGAAATGGAAGAGAAGAAATTAGGCGATGAGGATTCGTATGCCCAATTTCTGAAGAAAAGGAAGCCGATGGATAAGAGAATTGAAAACGTGGATGAAGAACGGGCAGGTGGCGTCGTCGACGGTCAGGCCGTCTGTTGGAACTCTAGTGAGGACATTGCGTTGCTCAATGCTTTGAAGGCTTTTCCAAAGGAGGTGCCAATGAGATGGGAGAAGATTGCAGCTGCTCTACCAGGGAAGACGAAGGCAGCTTGTATGAAAAGAGTTGGGGAATTGAAAAGGGATTTTCGAAATTCGAAGGCTGGGAATGACATCTGA

Protein sequence

MEFLDEDAKPRFLFHCRANPSSAPELHIEPQSCKLFCSITVVLSSILLILSILFVQFEPFRSILIWMSLSLLLGPFAPISITGGDIRVGRGPILEIPDEESEMEDDSKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKVENRNGALGSSNNGVDFAIEEAEWDEGELKVLKKQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGDEDSYAQFLKKRKPMDKRIENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKAGNDI

Homology

[Close]

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot
Match: Q9ASQ2 (Transcription factor MAMYB OS=Arabidopsis thaliana OX=3702 GN=MAMYB PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.4e-71
Identity = 163/316 (51.58%), Postives = 204/316 (64.56%), Query Frame = 0


Query: 1   MEFLDEDAKPRFLFHCRANPSSAPELHIEPQ-SCKLFCSITVVLSSILLILSILFVQFEP 60
           M+F DED +PRF+F  R + S   E   E +   KLF SI+V +S I+L LS  + + EP
Sbjct: 1   MDFFDED-RPRFVFQSRPSSSHTAEEEEEARIPNKLFISISVSISLIILSLSFFYFESEP 60

Query: 61  FRSILIWMSLSLLLGPFAPISITGGDIRVGRGPILE---IPDEES-EMEDDSKTKPVQKR 120
            +S+L+W+SLS L+GPFAP S+TGG IRVG G ILE   I DE S + E +S+ K V KR
Sbjct: 61  AKSLLLWLSLSFLVGPFAPSSLTGGKIRVGYGQILEPEQIHDESSTDNERESRRKSVNKR 120

Query: 121 SKPRRSG----EIAAGVIEVVEKASSKVENRNGALGSSNNGVDFAIEEAEWDEGELKVLK 180
           SK         E A+ V EV  K        +G++           E  +W   E+++LK
Sbjct: 121 SKGSTKSDNPPENASAVTEVSRKVVIPQSKESGSVN----------ETKDWTAEEIEILK 180

Query: 181 KQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGDEDSYAQFLKKRKPMDK 240
           KQL KHP GKP RWE +A AFGGR K E+VIK AKE+ EKK+ + D YAQFLK RK  D 
Sbjct: 181 KQLIKHPAGKPGRWETVASAFGGRYKTENVIKKAKEIGEKKIYESDDYAQFLKNRKASDP 240

Query: 241 RI--ENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAA 300
           R+  EN +   AGG  +G    W++ EDIALLNALKAFPKE  MRWEKIAAA+PGK+KAA
Sbjct: 241 RLVDENEENSGAGGDAEGTKEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAA 300

Query: 301 CMKRVGELKRDFRNSK 306
           CMKRV ELK+ FR+SK
Sbjct: 301 CMKRVTELKKGFRSSK 305

[Close]

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot
Match: Q6P2Y3 (DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis OX=8364 GN=dnajc2 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 8.3e-14
Identity = 55/189 (29.10%), Postives = 88/189 (46.56%), Query Frame = 0


Query: 133 EKASSKVENRNGALGSSNNGVDFAIEEAEWDEGELKVLKKQLAKHPVGKPRRWEIIAEAF 192
           EK   +   +    G+ N+ +        W E +L++L K +   P G   RWE+IA   
Sbjct: 423 EKEQEEARMKQSTKGAENSAIGGGSGSKSWSEDDLQLLIKAVNLFPAGTNARWEVIANYM 482

Query: 193 ------GGRLKVESVIKMAKEMEEKKLGDED-----SYAQFLKKRKPMDKRIEN-VDEER 252
                 G +   + VI  AK +++     +D     ++ +F K+ + + + ++N V  ER
Sbjct: 483 NLHSISGIKRTSKDVINKAKSLQKLDPQQKDDINKKAFDKFKKEHRVVPQSVDNAVPSER 542

Query: 253 AGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACMKRVGELKRD 310
             G     +  W + E   L  ALK +P   P RWEKIA A+PG++K  CMKR  EL   
Sbjct: 543 FEGPAADMSP-WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEM 602

[Close]

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot
Match: Q6NWJ4 (DnaJ homolog subfamily C member 2 OS=Danio rerio OX=7955 GN=dnajc2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.2e-13
Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 99  EESEMEDDSKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKVENRNGALGSSNNGVDFAIE 158
           E+S+   + + + V  + +  +  E+ A      ++A+   E+ + A G +N G      
Sbjct: 402 EQSKAALEKQVQEVNMQLQKEKDAELQA------QQAARGSEHSSAAGGQNNRG------ 461

Query: 159 EAEWDEGELKVLKKQLAKHPVGKPRRWEIIA------EAFGGRLKVESVIKMAKEMEEKK 218
              W E +L++L K +   P G   RWE+IA       + G R   + VI  AK +++  
Sbjct: 462 ---WSEEDLQLLIKAVNLFPAGTNARWEVIANYMNQHSSSGVRRTAKDVINKAKTLQKLD 521

Query: 219 LGDED-----SYAQFLKKRKPMDKRIEN-VDEERAGGV-VDGQAVCWNSSEDIALLNALK 278
              +D     ++ +F K+   +   ++N +  ER   V  D  A  W + E   L  ALK
Sbjct: 522 PHQKDEINRKAFEKFKKEHSAVPPTVDNAMPSERFDAVGADSNAAAWTTEEQKLLEQALK 581

Query: 279 AFPKEVPMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKAGND 310
            +P     RWE+I+ A+PG++K  CMKR  EL    +  KA  +
Sbjct: 582 TYPVSTAERWERISEAVPGRSKKDCMKRYKELVEMIKAKKAAQE 610

[Close]

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot
Match: Q1RMH9 (DnaJ homolog subfamily C member 2 OS=Bos taurus OX=9913 GN=DNAJC2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 0


Query: 107 SKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKV----ENRNGALGSSNNGVDFAIEEAEW 166
           S TK V K +  ++  EI   + +  E+A +++    +N   + G   NG         W
Sbjct: 401 SSTKEVGKAALEKQIEEINEQIRKEKEEAEARMRQASKNAEKSAGGGGNG------SKHW 460

Query: 167 DEGELKVLKKQLAKHPVGKPRRWEIIA------EAFGGRLKVESVIKMAKEMEEKKLGDE 226
            E +L++L K +   P G   RWE+IA       + G +   + VI  AK +++     +
Sbjct: 461 SEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQK 520

Query: 227 D-----SYAQFLKKRKPMDKRIENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEV 286
           D     ++ +F K+   + +       ER  G        W + E   L  ALK +P   
Sbjct: 521 DDINKKAFDKFKKEHGVVPQADNATPSERFEGPCT-DFTPWTTEEQKLLEQALKTYPVNT 580

Query: 287 PMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKAGND 310
           P RWEKIA A+PG+TK  CMKR  EL    +  KA  +
Sbjct: 581 PERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611

[Close]

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot
Match: Q99543 (DnaJ homolog subfamily C member 2 OS=Homo sapiens OX=9606 GN=DNAJC2 PE=1 SV=4)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 0


Query: 107 SKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKV----ENRNGALGSSNNGVDFAIEEAEW 166
           S TK V K +  ++  EI   + +  E+A +++    +N   + G   NG         W
Sbjct: 401 SCTKEVGKAALEKQIEEINEQIRKEKEEAEARMRQASKNTEKSTGGGGNG------SKNW 460

Query: 167 DEGELKVLKKQLAKHPVGKPRRWEIIA------EAFGGRLKVESVIKMAKEMEEKKLGDE 226
            E +L++L K +   P G   RWE+IA       + G +   + VI  AK +++     +
Sbjct: 461 SEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQK 520

Query: 227 D-----SYAQFLKKRKPMDKRIENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEV 286
           D     ++ +F K+   + +       ER  G        W + E   L  ALK +P   
Sbjct: 521 DDINKKAFDKFKKEHGVVPQADNATPSERFEGPYT-DFTPWTTEEQKLLEQALKTYPVNT 580

Query: 287 PMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKAGND 310
           P RWEKIA A+PG+TK  CMKR  EL    +  KA  +
Sbjct: 581 PERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611

[Close]

BLAST of CmaCh02G015860 vs. TAIR 10
Match: AT5G45420.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 268.9 bits (686), Expect = 5.2e-72
Identity = 163/316 (51.58%), Postives = 204/316 (64.56%), Query Frame = 0


Query: 1   MEFLDEDAKPRFLFHCRANPSSAPELHIEPQ-SCKLFCSITVVLSSILLILSILFVQFEP 60
           M+F DED +PRF+F  R + S   E   E +   KLF SI+V +S I+L LS  + + EP
Sbjct: 1   MDFFDED-RPRFVFQSRPSSSHTAEEEEEARIPNKLFISISVSISLIILSLSFFYFESEP 60

Query: 61  FRSILIWMSLSLLLGPFAPISITGGDIRVGRGPILE---IPDEES-EMEDDSKTKPVQKR 120
            +S+L+W+SLS L+GPFAP S+TGG IRVG G ILE   I DE S + E +S+ K V KR
Sbjct: 61  AKSLLLWLSLSFLVGPFAPSSLTGGKIRVGYGQILEPEQIHDESSTDNERESRRKSVNKR 120

Query: 121 SKPRRSG----EIAAGVIEVVEKASSKVENRNGALGSSNNGVDFAIEEAEWDEGELKVLK 180
           SK         E A+ V EV  K        +G++           E  +W   E+++LK
Sbjct: 121 SKGSTKSDNPPENASAVTEVSRKVVIPQSKESGSVN----------ETKDWTAEEIEILK 180

Query: 181 KQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGDEDSYAQFLKKRKPMDK 240
           KQL KHP GKP RWE +A AFGGR K E+VIK AKE+ EKK+ + D YAQFLK RK  D 
Sbjct: 181 KQLIKHPAGKPGRWETVASAFGGRYKTENVIKKAKEIGEKKIYESDDYAQFLKNRKASDP 240

Query: 241 RI--ENVDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAA 300
           R+  EN +   AGG  +G    W++ EDIALLNALKAFPKE  MRWEKIAAA+PGK+KAA
Sbjct: 241 RLVDENEENSGAGGDAEGTKEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAA 300

Query: 301 CMKRVGELKRDFRNSK 306
           CMKRV ELK+ FR+SK
Sbjct: 301 CMKRVTELKKGFRSSK 305

[Close]

BLAST of CmaCh02G015860 vs. TAIR 10
Match: AT3G11450.1 (DnaJ domain ;Myb-like DNA-binding domain )

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19
Identity = 58/181 (32.04%), Postives = 85/181 (46.96%), Query Frame = 0


Query: 162 WDEGELKVLKKQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGDEDSYAQ 221
           W + E+ +L+K + K+P G  RRWE+I+E  G    VE ++K  K +  +K     ++  
Sbjct: 466 WSKEEIDMLRKGMIKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLQKPDSAKAFDS 525

Query: 222 FLKKRKP----------------------------------MDKRIENVDEERAGGV-VD 281
           FL+KRKP                                  + K   +   +  G V   
Sbjct: 526 FLEKRKPSASITSPLSTREELGESLPTMTTTTNAKPSKETVVGKSSSSQSSDNNGEVGGS 585

Query: 282 GQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACMKRVGELKRDFRNSKA 308
             A  W++ ++ AL+ ALK FPKE   RWE++AAA+PGKT   C K+  ELK   RN K 
Sbjct: 586 SDADSWSTVQERALVQALKTFPKETSQRWERVAAAVPGKTMNQCKKKFAELKEIIRNKKT 645

[Close]

BLAST of CmaCh02G015860 vs. TAIR 10
Match: AT5G06110.1 (DnaJ domain ;Myb-like DNA-binding domain )

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14
Identity = 64/254 (25.20%), Postives = 103/254 (40.55%), Query Frame = 0


Query: 96  IPDEESEMEDDSKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKVENRNGALGSSNNGVDF 155
           I D++ E+E++     V++      +G + A                NG + +  +    
Sbjct: 427 IDDDKIEIEEEEVQVAVKQNGHIEANGHVEA----------------NGHVEAKVDTATH 486

Query: 156 AIEEAEWDEGELKVLKKQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGD 215
             +E  W + E+ +L+K   K P G  +RWE+I+E  G    VE ++K  K +  +K   
Sbjct: 487 EKKEKPWSKEEIDMLRKGTTKFPKGTSQRWEVISEYIGTGRSVEEILKATKTVLLQKPDS 546

Query: 216 EDSYAQFLKKRKP-----------------------------------------MDKRIE 275
             ++  FL+ RKP                                          +    
Sbjct: 547 AKAFDSFLENRKPAASINSPLSTREELGEPIIPTKAHEDNNSTKTETAEQNGKTKENNNS 606

Query: 276 NVDEERA---GGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACM 306
           N + E A   G   DG    W++ ++ AL+ ALK FPKE   RWE++A A+PGKT   C 
Sbjct: 607 NGNSEPAAASGSDPDG----WSAVQERALVQALKTFPKETNQRWERVATAVPGKTMNQCK 660

[Close]

BLAST of CmaCh02G015860 vs. TAIR 10
Match: AT5G06110.2 (DnaJ domain ;Myb-like DNA-binding domain )

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14
Identity = 64/254 (25.20%), Postives = 103/254 (40.55%), Query Frame = 0


Query: 96  IPDEESEMEDDSKTKPVQKRSKPRRSGEIAAGVIEVVEKASSKVENRNGALGSSNNGVDF 155
           I D++ E+E++     V++      +G + A                NG + +  +    
Sbjct: 427 IDDDKIEIEEEEVQVAVKQNGHIEANGHVEA----------------NGHVEAKVDTATH 486

Query: 156 AIEEAEWDEGELKVLKKQLAKHPVGKPRRWEIIAEAFGGRLKVESVIKMAKEMEEKKLGD 215
             +E  W + E+ +L+K   K P G  +RWE+I+E  G    VE ++K  K +  +K   
Sbjct: 487 EKKEKPWSKEEIDMLRKGTTKFPKGTSQRWEVISEYIGTGRSVEEILKATKTVLLQKPDS 546

Query: 216 EDSYAQFLKKRKP-----------------------------------------MDKRIE 275
             ++  FL+ RKP                                          +    
Sbjct: 547 AKAFDSFLENRKPAASINSPLSTREELGEPIIPTKAHEDNNSTKTETAEQNGKTKENNNS 606

Query: 276 NVDEERA---GGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACM 306
           N + E A   G   DG    W++ ++ AL+ ALK FPKE   RWE++A A+PGKT   C 
Sbjct: 607 NGNSEPAAASGSDPDG----WSAVQERALVQALKTFPKETNQRWERVATAVPGKTMNQCK 660

[Close]

BLAST of CmaCh02G015860 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 55.5 bits (132), Expect = 9.1e-08
Identity = 23/72 (31.94%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 236 VDEERAGGVVDGQAVCWNSSEDIALLNALKAFPKEVPMRWEKIAAALPGKTKAACMKRVG 295
           ++E ++G    G+   W ++E+ A  NAL  +    P RW+K+AA +PGKT +  +++  
Sbjct: 18  MEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYN 77

Query: 296 ELKRDFRNSKAG 308
           +L+ D  + +AG
Sbjct: 78  DLEADVSSIEAG 89

The following BLAST results are available for this feature:

BLAST of CmaCh02G015860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASQ2	7.4e-71	51.58	Transcription factor MAMYB OS=Arabidopsis thaliana OX=3702 GN=MAMYB PE=1 SV=1	[more]
Q6P2Y3	8.3e-14	29.10	DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis OX=8364 GN=dnajc2 PE=2 S...	[more]
Q6NWJ4	9.2e-13	27.23	DnaJ homolog subfamily C member 2 OS=Danio rerio OX=7955 GN=dnajc2 PE=2 SV=1	[more]
Q1RMH9	1.6e-12	28.90	DnaJ homolog subfamily C member 2 OS=Bos taurus OX=9913 GN=DNAJC2 PE=2 SV=1	[more]
Q99543	3.5e-12	28.90	DnaJ homolog subfamily C member 2 OS=Homo sapiens OX=9606 GN=DNAJC2 PE=1 SV=4	[more]

BLAST of CmaCh02G015860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45420.1	5.2e-72	51.58	Duplicated homeodomain-like superfamily protein	[more]
AT3G11450.1	1.0e-19	32.04	DnaJ domain ;Myb-like DNA-binding domain	[more]
AT5G06110.1	2.9e-14	25.20	DnaJ domain ;Myb-like DNA-binding domain	[more]
AT5G06110.2	2.9e-14	25.20	DnaJ domain ;Myb-like DNA-binding domain	[more]
AT5G58900.1	9.1e-08	31.94	Homeodomain-like transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 248..300 e-value: 6.2E-5 score: 32.4 coord: 158..211 e-value: 0.18 score: 20.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 252..293 score: 6.783049
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 252..293 e-value: 8.66489E-6 score: 40.2514
None	No IPR available	GENE3D	1.10.10.60		coord: 246..309 e-value: 1.1E-14 score: 56.0
None	No IPR available	GENE3D	1.10.10.60		coord: 157..214 e-value: 1.2E-12 score: 49.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..121
None	No IPR available	PANTHER	PTHR43999:SF3	TRANSCRIPTION FACTOR MAMYB	coord: 1..308
IPR044634	J-protein Zuotin/DnaJC2	PANTHER	PTHR43999	DNAJ HOMOLOG SUBFAMILY C MEMBER 2	coord: 1..308
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 157..197
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 251..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G015860.1	CmaCh02G015860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0048767	root hair elongation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030544	Hsp70 protein binding
molecular_function	GO:0043022	ribosome binding