CmaCh01G013350.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G013350.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	VQ motif-containing protein 22-like
Location	Cma_Chr01: 9564824 .. 9565435 (+)
Sequence length	612
RNA-Seq Expression	CmaCh01G013350.1
Synteny	CmaCh01G013350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATCAATGGATTCACATGTATCACCAAGACAACCTCTCAAACAATCAACAACTCTCCTTCAACCTTTCCGACCACCATCAGGTCAATAACGACGATAATTCCGGGGTTGTTTCTGATTCCACCGTCGTCACCGCCGCCGTCTCCTCCGCCACAACGCTACCGACCTCGTCCGGTTTGATCCCAGATGGGGGCAGAGTCTCGAAGCCGGTTCGCAAGCGGACCAGAGCCTCTCGACGGACTCCAACCACTTTATTCAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAGTTCACCGGTGGTCCATCTAACAACGCTTCCAATTTTTCCACATTTGGCTTCTCCAGTAACTCCAACGCCGTTTTCGACCCCTCCGTCGCCGCCTACAACCTCAACGCTCCGCCGGTATTCCAATTCCAAAACCAAGCTCCACCGCCGGCGCCGCTGCAGCAACAGCCGTTTATGTTCTCGTTGGGGAATTCAGCGGCGAGTGAGACGTTTTTTCAACAGGGTGGGGGGTTGAGGAGTAATGATAGCAATGTTAATTACACGGGGCTGTTTGATGGGTCTTCGCCGACGGCTCAGAATCCTCGATCGGAGTGA

mRNA sequence

ATGGCTGATCAATGGATTCACATGTATCACCAAGACAACCTCTCAAACAATCAACAACTCTCCTTCAACCTTTCCGACCACCATCAGGTCAATAACGACGATAATTCCGGGGTTGTTTCTGATTCCACCGTCGTCACCGCCGCCGTCTCCTCCGCCACAACGCTACCGACCTCGTCCGGTTTGATCCCAGATGGGGGCAGAGTCTCGAAGCCGGTTCGCAAGCGGACCAGAGCCTCTCGACGGACTCCAACCACTTTATTCAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAGTTCACCGGTGGTCCATCTAACAACGCTTCCAATTTTTCCACATTTGGCTTCTCCAGTAACTCCAACGCCGTTTTCGACCCCTCCGTCGCCGCCTACAACCTCAACGCTCCGCCGGTATTCCAATTCCAAAACCAAGCTCCACCGCCGGCGCCGCTGCAGCAACAGCCGTTTATGTTCTCGTTGGGGAATTCAGCGGCGAGTGAGACGTTTTTTCAACAGGGTGGGGGGTTGAGGAGTAATGATAGCAATGTTAATTACACGGGGCTGTTTGATGGGTCTTCGCCGACGGCTCAGAATCCTCGATCGGAGTGA

Coding sequence (CDS)

ATGGCTGATCAATGGATTCACATGTATCACCAAGACAACCTCTCAAACAATCAACAACTCTCCTTCAACCTTTCCGACCACCATCAGGTCAATAACGACGATAATTCCGGGGTTGTTTCTGATTCCACCGTCGTCACCGCCGCCGTCTCCTCCGCCACAACGCTACCGACCTCGTCCGGTTTGATCCCAGATGGGGGCAGAGTCTCGAAGCCGGTTCGCAAGCGGACCAGAGCCTCTCGACGGACTCCAACCACTTTATTCAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAGTTCACCGGTGGTCCATCTAACAACGCTTCCAATTTTTCCACATTTGGCTTCTCCAGTAACTCCAACGCCGTTTTCGACCCCTCCGTCGCCGCCTACAACCTCAACGCTCCGCCGGTATTCCAATTCCAAAACCAAGCTCCACCGCCGGCGCCGCTGCAGCAACAGCCGTTTATGTTCTCGTTGGGGAATTCAGCGGCGAGTGAGACGTTTTTTCAACAGGGTGGGGGGTTGAGGAGTAATGATAGCAATGTTAATTACACGGGGCTGTTTGATGGGTCTTCGCCGACGGCTCAGAATCCTCGATCGGAGTGA

Protein sequence

MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSGLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSNSNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSNDSNVNYTGLFDGSSPTAQNPRSE

Homology

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 33  DDNSGVVSDSTVVTAAVSSAT---TLPTSSGLIPDGGRVSKPVRKRTRASRRTPTTLFNT 92
           ++N    + ST  + AV++ T   T    S L P+ GRV+KP R+R+RASRRTPTTL NT
Sbjct: 12  NNNQTFFTTSTTASTAVTTTTAGDTTSIDSRLSPETGRVTKPTRRRSRASRRTPTTLLNT 71

Query: 93  DAANFRAMVQQFTGGPSNNA--SNFSTFGFSSNSNAVFDPSVAAYNLNAPPVFQFQNQAP 152
           D +NFRAMVQQ+TGGPS  A  S  +T  FS  S++  DPS A  +  AP  + FQ  AP
Sbjct: 72  DTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSS--DPS-AGSSQQAPWQYNFQPHAP 131

Query: 153 PPAPLQQQPFMFSLGNSAASETFFQQGGGLRSNDSNVNYTGLF---DGSSPTAQNPRSE 204
              P  Q+P+MFSL N           G    N+ N   +G+F   DGS      P S+
Sbjct: 132 LQPP--QRPYMFSLNNVNPVV------GYSNMNNPNTMVSGVFGTVDGSGGGGSAPSSK 179

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL
Match: A0A6J1IXU5 (VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111480903 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.1e-105
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG
Sbjct: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180
           SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN
Sbjct: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180

Query: 181 DSNVNYTGLFDGSSPTAQNPRSE 204
           DSNVNYTGLFDGSSPTAQNPRSE
Sbjct: 181 DSNVNYTGLFDGSSPTAQNPRSE 203

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL
Match: A0A6J1FIN8 (VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111445815 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.5e-95
Identity = 190/204 (93.14%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWIHMYHQ   +NNQQLSFNLSDH QVNNDDNSGVVSDSTVVTAA+SSATTLPTSSG
Sbjct: 1   MADQWIHMYHQ---NNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAISSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGF SN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQA-PPPAPLQQQPFMFSLGNSAASETFFQQGGGLRS 180
           SNAVFDP+VAAY+L+APPVFQFQNQA PPP PLQQ PFMFSLGNSAASETFFQQGGGLRS
Sbjct: 121 SNAVFDPTVAAYHLDAPPVFQFQNQAPPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRS 180

Query: 181 NDSNVNYTGLFDGSSPTAQNPRSE 204
           NDSNVNY GLFDGSSPTAQNPRSE
Sbjct: 181 NDSNVNYMGLFDGSSPTAQNPRSE 201

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL
Match: A0A0A0L4D1 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618460 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49
Identity = 127/201 (63.18%), Postives = 149/201 (74.13%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLP-TSS 60
           MA+QW++MY+Q+NLSN  QL F+LS H  +++++NS VVSDSTVVT AVSSA T P +SS
Sbjct: 1   MANQWLNMYNQNNLSNT-QLPFHLSHHDHLSSNNNSDVVSDSTVVTTAVSSANTPPASSS 60

Query: 61  GLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPS---NNASNFSTFG 120
           GL PDG RV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS   NN  NF+TFG
Sbjct: 61  GLNPDGTRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSNANNNLHNFATFG 120

Query: 121 FSSNSNAVFDP-SVAAYNLNAP----PVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFF 180
           F  NS  +FDP S AAY +  P     V QFQNQ PP       P MFSL NS   + F+
Sbjct: 121 FPCNSQTLFDPASAAAYQVQDPAQQQSVLQFQNQPPP-------PLMFSLSNSGGGDAFY 180

Query: 181 QQGGGLRS--NDSNVNYTGLF 191
           QQGGG RS  N++N+NYTG F
Sbjct: 181 QQGGGSRSNNNNNNINYTGGF 193

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL
Match: A0A5A7V6Y2 (VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002890 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 125/196 (63.78%), Postives = 146/196 (74.49%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLP-TSS 60
           MA+QW++MY+Q+NL N  QL F+LSDH  +++++NS VVSDSTVVT AVSSATT P +SS
Sbjct: 1   MANQWLNMYNQNNLPNT-QLPFHLSDHDHLSSNNNSDVVSDSTVVTTAVSSATTPPASSS 60

Query: 61  GLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSN---NASNFSTFG 120
           GL PDG RV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPSN   N  NF+TFG
Sbjct: 61  GLNPDGTRVTKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSNANSNLHNFATFG 120

Query: 121 FSSNSNAVFDP-SVAAYNLNAPP------VFQFQNQAPPPAPLQQQPFMFSLGNSAASET 180
           F  NS  ++DP S AAY +  PP      VFQFQNQ P        P MFSL NS   + 
Sbjct: 121 FPCNSQTLYDPASAAAYQVQDPPQQQQQSVFQFQNQPP--------PLMFSLSNSGGGDA 180

Query: 181 FFQQGGGLRSNDSNVN 186
           FFQQGGG RSN++N N
Sbjct: 181 FFQQGGGSRSNNNNNN 187

[Close]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL
Match: A0A1S3CM56 (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103502514 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 125/196 (63.78%), Postives = 146/196 (74.49%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLP-TSS 60
           MA+QW++MY+Q+NL N  QL F+LSDH  +++++NS VVSDSTVVT AVSSATT P +SS
Sbjct: 1   MANQWLNMYNQNNLPNT-QLPFHLSDHDHLSSNNNSDVVSDSTVVTTAVSSATTPPASSS 60

Query: 61  GLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSN---NASNFSTFG 120
           GL PDG RV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPSN   N  NF+TFG
Sbjct: 61  GLNPDGTRVTKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSNANSNLHNFATFG 120

Query: 121 FSSNSNAVFDP-SVAAYNLNAPP------VFQFQNQAPPPAPLQQQPFMFSLGNSAASET 180
           F  NS  ++DP S AAY +  PP      VFQFQNQ P        P MFSL NS   + 
Sbjct: 121 FPCNSQTLYDPASAAAYQVQDPPQQQQQSVFQFQNQPP--------PLMFSLSNSGGGDA 180

Query: 181 FFQQGGGLRSNDSNVN 186
           FFQQGGG RSN++N N
Sbjct: 181 FFQQGGGSRSNNNNNN 187

[Close]

BLAST of CmaCh01G013350.1 vs. NCBI nr
Match: XP_022981901.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 390.6 bits (1002), Expect = 8.4e-105
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG
Sbjct: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180
           SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN
Sbjct: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180

Query: 181 DSNVNYTGLFDGSSPTAQNPRSE 204
           DSNVNYTGLFDGSSPTAQNPRSE
Sbjct: 181 DSNVNYTGLFDGSSPTAQNPRSE 203

[Close]

BLAST of CmaCh01G013350.1 vs. NCBI nr
Match: KAG6608003.1 (VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037520.1 VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 4.2e-96
Identity = 191/203 (94.09%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWIHMYHQ   +NNQQLSFNLSDH QVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG
Sbjct: 1   MADQWIHMYHQ---NNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGF SN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180
           SNAVFDP+VAAY+L+APPVFQFQNQAPPP PLQQ PFMFSLGNSAASETFFQQGGGLRSN
Sbjct: 121 SNAVFDPTVAAYHLDAPPVFQFQNQAPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRSN 180

Query: 181 DSNVNYTGLFDGSSPTAQNPRSE 204
           DSNVNY GLFDGSSPTAQNPRSE
Sbjct: 181 DSNVNYMGLFDGSSPTAQNPRSE 200

[Close]

BLAST of CmaCh01G013350.1 vs. NCBI nr
Match: XP_022940097.1 (VQ motif-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 190/204 (93.14%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWIHMYHQ   +NNQQLSFNLSDH QVNNDDNSGVVSDSTVVTAA+SSATTLPTSSG
Sbjct: 1   MADQWIHMYHQ---NNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAISSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGF SN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQA-PPPAPLQQQPFMFSLGNSAASETFFQQGGGLRS 180
           SNAVFDP+VAAY+L+APPVFQFQNQA PPP PLQQ PFMFSLGNSAASETFFQQGGGLRS
Sbjct: 121 SNAVFDPTVAAYHLDAPPVFQFQNQAPPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRS 180

Query: 181 NDSNVNYTGLFDGSSPTAQNPRSE 204
           NDSNVNY GLFDGSSPTAQNPRSE
Sbjct: 181 NDSNVNYMGLFDGSSPTAQNPRSE 201

[Close]

BLAST of CmaCh01G013350.1 vs. NCBI nr
Match: XP_023525782.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 188/203 (92.61%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           MADQWI MYHQ   +NNQQLSFNLSDH Q+NNDDNSGVVSDSTVVTAAVSSATTLPTSSG
Sbjct: 1   MADQWIRMYHQ---NNNQQLSFNLSDHRQLNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSSN 120
           LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGF SN
Sbjct: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSN 120

Query: 121 SNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRSN 180
           SNAVFDP+VAAY+L APPVFQFQNQ PP APLQQ PFMFSLGNSAASETFFQQGGGLRSN
Sbjct: 121 SNAVFDPTVAAYHLEAPPVFQFQNQPPPHAPLQQPPFMFSLGNSAASETFFQQGGGLRSN 180

Query: 181 DSNVNYTGLFDGSSPTAQNPRSE 204
           DSNVNY GLFDGSSPTAQNPRSE
Sbjct: 181 DSNVNYMGLFDGSSPTAQNPRSE 200

[Close]

BLAST of CmaCh01G013350.1 vs. NCBI nr
Match: XP_038898930.1 (VQ motif-containing protein 22-like [Benincasa hispida])

HSP 1 Score: 244.6 bits (623), Expect = 7.4e-61
Identity = 145/211 (68.72%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MADQWIHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSG 60
           M+++W+HMYHQ+NLSN  QL F+LSDH QVN ++NS  VSDSTVVTAAVSSATT P S+G
Sbjct: 1   MSNRWLHMYHQNNLSNT-QLPFHLSDHDQVNTNNNSDTVSDSTVVTAAVSSATTPPASTG 60

Query: 61  LIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPS---NNASNFSTFGF 120
           L PDG RV KPVRKR+RASRRTPTT+ NTDAANFRAMVQQFTGGPS   NN  NF TFGF
Sbjct: 61  LNPDGSRV-KPVRKRSRASRRTPTTVLNTDAANFRAMVQQFTGGPSNANNNLHNFPTFGF 120

Query: 121 SSNSNAVFDPSVAAYNLNAPP----VFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQ 180
             N  A+FDP+ AAY+L  PP    +FQFQ+Q   P PLQQ PFMFSL NSAA   FFQQ
Sbjct: 121 PGNCQALFDPAAAAYHLQDPPQQPTLFQFQSQ---PPPLQQPPFMFSLSNSAAGAAFFQQ 180

Query: 181 --GGGLRS-NDSNVNYTGLFDGSSPTAQNPR 202
             GGG RS ND+N+NY  +FDGSSPT QN R
Sbjct: 181 PHGGGSRSNNDNNINYMEVFDGSSPTPQNHR 206

[Close]

BLAST of CmaCh01G013350.1 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 33  DDNSGVVSDSTVVTAAVSSAT---TLPTSSGLIPDGGRVSKPVRKRTRASRRTPTTLFNT 92
           ++N    + ST  + AV++ T   T    S L P+ GRV+KP R+R+RASRRTPTTL NT
Sbjct: 12  NNNQTFFTTSTTASTAVTTTTAGDTTSIDSRLSPETGRVTKPTRRRSRASRRTPTTLLNT 71

Query: 93  DAANFRAMVQQFTGGPSNNA--SNFSTFGFSSNSNAVFDPSVAAYNLNAPPVFQFQNQAP 152
           D +NFRAMVQQ+TGGPS  A  S  +T  FS  S++  DPS A  +  AP  + FQ  AP
Sbjct: 72  DTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSS--DPS-AGSSQQAPWQYNFQPHAP 131

Query: 153 PPAPLQQQPFMFSLGNSAASETFFQQGGGLRSNDSNVNYTGLF---DGSSPTAQNPRSE 204
              P  Q+P+MFSL N           G    N+ N   +G+F   DGS      P S+
Sbjct: 132 LQPP--QRPYMFSLNNVNPVV------GYSNMNNPNTMVSGVFGTVDGSGGGGSAPSSK 179

[Close]

BLAST of CmaCh01G013350.1 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-18
Identity = 69/147 (46.94%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 31  NNDDNSGVVSDSTVVTAAVSSATTLPTS-----SGLIPDGGRVSKPVRKRTRASRRTPTT 90
           +N+D S   ++ T  T A S+ TT  T+     S L PD  RV+KP R+R+RASRRTPTT
Sbjct: 4   SNNDWSQFYNNQTFFTTATSTVTTTTTTATSADSPLSPDNRRVAKPTRRRSRASRRTPTT 63

Query: 91  LFNTDAANFRAMVQQFTGGPSNNASNFS-TFGFSSNSNAVFDPSVAAYNLNAPPVFQFQN 150
           LFNTD ANFRAMVQQFTGGPS  A   S + GFS  S+   DP+ A  + +       QN
Sbjct: 64  LFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSLTSS---DPT-AGVSSSPWQYANLQN 123

Query: 151 QAPPPAPLQQQ-PFMFSLGNSAASETF 171
           Q      +QQQ P+MFS  N+ ++ ++
Sbjct: 124 QMAHNELMQQQRPYMFSSSNNVSTLSY 146

[Close]

BLAST of CmaCh01G013350.1 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 69  SKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASN 112
           S+  RKRTRASRR PTT+  TD +NFRAMVQ+FTG P++  S+
Sbjct: 96  SRNPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSH 138

[Close]

BLAST of CmaCh01G013350.1 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 46  TAAVSSATTLPTSSGLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGP 105
           T   S   ++PT      +G   ++  +KR+R SRR PTT+  TD +NFRAMVQ+FTG P
Sbjct: 116 TNTTSPICSVPTDK---KNGLATTRNPKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNP 175

Query: 106 SN---------NASNFSTFGFSSNSNA 124
           S            S F  FG SS+S++
Sbjct: 176 STPFTGLSSSFPRSRFDLFGSSSSSSS 199

[Close]

BLAST of CmaCh01G013350.1 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 52/157 (33.12%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 6   IHMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSGLIPDG 65
           +H  H +N S      FN +    VN   +   +S   + T++ +S+     + G+I   
Sbjct: 57  LHFDHNNNNSLIPPNYFNNNTFLPVNQQPDP--ISQLDLRTSSATSSLPPTNNIGVI--- 116

Query: 66  GRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSN---------NASNFSTF- 125
               K  +KR+RASRR PTT+  TD +NFRAMVQ+FTG P+          N +  +TF 
Sbjct: 117 ----KKTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNNNSIVNTTRLNTFL 176

Query: 126 GFSSNSNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPL 153
           G SS+S     P+   YN N   +  F  +  P  PL
Sbjct: 177 GLSSSS-----PN--TYNTNNLLLRPFAQKLTPATPL 197

The following BLAST results are available for this feature:

BLAST of CmaCh01G013350.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	1.8e-17	43.02	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of CmaCh01G013350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXU5	4.1e-105	100.00	VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111480903 ...	[more]
A0A6J1FIN8	6.5e-95	93.14	VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC11144581...	[more]
A0A0A0L4D1	1.1e-49	63.18	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618460 PE=4 SV=...	[more]
A0A5A7V6Y2	1.9e-49	63.78	VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CM56	1.9e-49	63.78	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103502514 PE=4...	[more]

BLAST of CmaCh01G013350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981901.1	8.4e-105	100.00	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
KAG6608003.1	4.2e-96	94.09	VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022940097.1	1.3e-94	93.14	VQ motif-containing protein 22-like [Cucurbita moschata]	[more]
XP_023525782.1	1.1e-93	92.61	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_038898930.1	7.4e-61	68.72	VQ motif-containing protein 22-like [Benincasa hispida]	[more]

BLAST of CmaCh01G013350.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22160.1	1.3e-18	43.02	VQ motif-containing protein	[more]
AT4G15120.1	4.9e-18	46.94	VQ motif-containing protein	[more]
AT1G35830.1	3.0e-07	62.79	VQ motif-containing protein	[more]
AT5G65170.1	1.5e-06	40.23	VQ motif-containing protein	[more]
AT4G39720.1	8.0e-05	33.12	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 81..107 e-value: 3.6E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..80
None	No IPR available	PANTHER	PTHR33179:SF29	VQ MOTIF-CONTAINING PROTEIN	coord: 3..184
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 3..184

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G013350	CmaCh01G013350	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G013350.1:exon:392	CmaCh01G013350.1:exon:392	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G013350.1:cds	CmaCh01G013350.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G013350.1	CmaCh01G013350.1-protein	polypeptide