CmUC11G211730.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC11G211730.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CmU531Chr11: 8020631 .. 8022855 (-)
Sequence length	1956
RNA-Seq Expression	CmUC11G211730.1
Synteny	CmUC11G211730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCCCATTTACCAGAACTAGCAACTCGAGTGAGCAGAGCCATACTTTCGATTTCAAATCGCACAAGCCCGACTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTTCGCCAAACGCTAAATCCATCTCTCGTCTCTCAAGTCATCGACCCTCATCTTCTTACCCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCTGGTTTCGCCCACAATTCCGGTTCCTACAAGTCGATTCTCAAGTCCCTCTCCCTTTCACGCCAATTTGGGGCTATTCATAGTCTCTTGAAACAGGTAAAAACTCAGAAAATTGGCCTGGATTTATCAGTTTATCGCTCTGTTATTGATTCCTTGATCATTGGCAAGAAGACCCATGATGCTCTTTTGGTTTTCAATGAGGTTAGTGATGTTATTGGATCCGAATCATGTAATGCGCTTCTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTTTTCGATGAAATGTCTCTGAAATGCATTCCTTTTAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAATACTGATGTAGTTAAAGTTTTAAACATGCTAGATGATGCCAGGACCGATAATTCGGAGATCAATGGCTCTGTTATTGCCACATTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTGCAGAAGCTTCAAACATTTTGGATGAGCTGAAGAATAGGGGTTGCAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATTTCAGTCAGAAGGGAGTGTGGTTGACAGGGAGAAAATCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTAATGACTATAAGGAGTACTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGCTAGGTGAAGTTATTGTCAAAGGAAATTTTCCTATGGATGAAGAGGTTTCTAATGTGCTGATAGGGTCAGTGGCTTCCATGGATCCTCACTCTGCTATTATGTTCTTCAAGTTGATGGTCGAGAAAGGGAGATTCCCAACTCTCTTGACTTTAAGAAATCTGAGTAGGAATTTATGTAAGCATGAAAAGATTGATGAACTGTTGGAAGTTTTCCAAGTTCTGAGTATAAATAACTACTTCAATGATTTTGATAGATACCATTTAAGAATTTCATTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGATTTGCCCCTGATGTATCGTTTTACAATTCTGTCCTAGACGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGAAAGCTGTGGGATGAGATGTTTGCTAGTGGCTGTGTTGGTAATTTAAAGACGTATAACATCCTTATTCAAAAGTTTTCAAAATCCAATCAAATCGAGGAAGCTTTGGTGCTTTACCGTCATATGCTTGGAAAAAAGGTCCAACCCGACATTACAATCTACACTTCCCTGCTTCAAGGGCTCTGTCAGGAATCGCAGCTTGAAGCTGCTTTTGAAGTCTTTAGCAAGTCTGTTGAACAGGATGTAAATCTTGCGGCAACCTTGCTGAGCACTTTTATCCTATGTCTTTGTAAAGCAGGCACGTTACTTTCCCTGGTTATACTGTGATGTTAGTTCGTGTGTGTTTCGTGTTTGTATATATCTGCTTATTGTCTGGAGTCATTTGTTTCTCACTTAACAAGTCCCCTGGTCGCCGCCATAGCTGGCCCTTTATAAACCTCTCTTCCATGCGCCAAATCACTCTTATTTGGGGTTATCCCTTAGATTACACCCTCTTGGCTTTGTTGGTTAGACACGTTTCATAAACAACCAACATCATTTTTGACTCTGTATTCAACATTTTCATTTAATGGTGGAGCTTTTAGTTAACTTGGATTCCAAACAATGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTATCAAGCGACATTGCTCACCCAGACTCCCATGTAACTTTACTGAAATGTTTTGCAGATGCTGGAAAGGTTCCACTAGCTAAGCAACATATAGAATGGGTTCAAGAAACTTCTCCATCAATGTTGTCTGTTGTATCCACTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAGAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTGCCACGTTTCCGCAATTGA

mRNA sequence

ATGAAACCCCATTTACCAGAACTAGCAACTCGAGTGAGCAGAGCCATACTTTCGATTTCAAATCGCACAAGCCCGACTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTTCGCCAAACGCTAAATCCATCTCTCGTCTCTCAAGTCATCGACCCTCATCTTCTTACCCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCTGGTTTCGCCCACAATTCCGGTTCCTACAAGTCGATTCTCAAGTCCCTCTCCCTTTCACGCCAATTTGGGGCTATTCATAGTCTCTTGAAACAGGTAAAAACTCAGAAAATTGGCCTGGATTTATCAGTTTATCGCTCTGTTATTGATTCCTTGATCATTGGCAAGAAGACCCATGATGCTCTTTTGGTTTTCAATGAGGTTAGTGATGTTATTGGATCCGAATCATGTAATGCGCTTCTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTTTTCGATGAAATGTCTCTGAAATGCATTCCTTTTAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAATACTGATGTAGTTAAAGTTTTAAACATGCTAGATGATGCCAGGACCGATAATTCGGAGATCAATGGCTCTGTTATTGCCACATTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTGCAGAAGCTTCAAACATTTTGGATGAGCTGAAGAATAGGGGTTGCAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATTTCAGTCAGAAGGGAGTGTGGTTGACAGGGAGAAAATCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTAATGACTATAAGGAGTACTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGCTAGGTGAAGTTATTGTCAAAGGAAATTTTCCTATGGATGAAGAGGTTTCTAATGTGCTGATAGGGTCAGTGGCTTCCATGGATCCTCACTCTGCTATTATGTTCTTCAAGTTGATGGTCGAGAAAGGGAGATTCCCAACTCTCTTGACTTTAAGAAATCTGAGTAGGAATTTATGTAAGCATGAAAAGATTGATGAACTGTTGGAAGTTTTCCAAGTTCTGAGTATAAATAACTACTTCAATGATTTTGATAGATACCATTTAAGAATTTCATTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGATTTGCCCCTGATGTATCGTTTTACAATTCTGTCCTAGACGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGAAAGCTGTGGGATGAGATGTTTGCTAGTGGCTGTGTTGGTAATTTAAAGACGTATAACATCCTTATTCAAAAGTTTTCAAAATCCAATCAAATCGAGGAAGCTTTGGTGCTTTACCGTCATATGCTTGGAAAAAAGGTCCAACCCGACATTACAATCTACACTTCCCTGCTTCAAGGGCTCTGTCAGGAATCGCAGCTTGAAGCTGCTTTTGAAGTCTTTAGCAAGTCTGTTGAACAGGATGTAAATCTTGCGGCAACCTTGCTGAGCACTTTTATCCTATGTCTTTGTAAAGCAGGCACGTTACTTTCCCTGTTAACTTGGATTCCAAACAATGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTATCAAGCGACATTGCTCACCCAGACTCCCATGTAACTTTACTGAAATGTTTTGCAGATGCTGGAAAGGTTCCACTAGCTAAGCAACATATAGAATGGGTTCAAGAAACTTCTCCATCAATGTTGTCTGTTGTATCCACTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAGAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTGCCACGTTTCCGCAATTGA

Coding sequence (CDS)

ATGAAACCCCATTTACCAGAACTAGCAACTCGAGTGAGCAGAGCCATACTTTCGATTTCAAATCGCACAAGCCCGACTGGATCATGGACCCCTTCACTGGAGCAGAATTTGCATCGACTCGGTTTTCGCCAAACGCTAAATCCATCTCTCGTCTCTCAAGTCATCGACCCTCATCTTCTTACCCATCACTCCCTCGCTCTCGGTTTCTTCAATTGGGCTTCTCAGCAACCTGGTTTCGCCCACAATTCCGGTTCCTACAAGTCGATTCTCAAGTCCCTCTCCCTTTCACGCCAATTTGGGGCTATTCATAGTCTCTTGAAACAGGTAAAAACTCAGAAAATTGGCCTGGATTTATCAGTTTATCGCTCTGTTATTGATTCCTTGATCATTGGCAAGAAGACCCATGATGCTCTTTTGGTTTTCAATGAGGTTAGTGATGTTATTGGATCCGAATCATGTAATGCGCTTCTGGCTGCTCTTGCTTCTGATGGGTTTTTTGAGCATGCCCAGAAAGTTTTCGATGAAATGTCTCTGAAATGCATTCCTTTTAACACTCTTGGATTTGGTGTGTTTATATGGAGGGTTTGTAGAAATACTGATGTAGTTAAAGTTTTAAACATGCTAGATGATGCCAGGACCGATAATTCGGAGATCAATGGCTCTGTTATTGCCACATTGATCATTCATGGGCTCTGTGGGGCATCTAGACTTGCAGAAGCTTCAAACATTTTGGATGAGCTGAAGAATAGGGGTTGCAAGCCTGACTTTTTGACGTATTGGATTCTTGGAGAAGCATTTCAGTCAGAAGGGAGTGTGGTTGACAGGGAGAAAATCCTGAAGAAGAAGAGAAAGTTGGGGGTAGCTCCAAGGCTTAATGACTATAAGGAGTACTTATTTGCTTTAATAGCTGGGAGACGGATATGTGAAGCTAAAGAGCTAGGTGAAGTTATTGTCAAAGGAAATTTTCCTATGGATGAAGAGGTTTCTAATGTGCTGATAGGGTCAGTGGCTTCCATGGATCCTCACTCTGCTATTATGTTCTTCAAGTTGATGGTCGAGAAAGGGAGATTCCCAACTCTCTTGACTTTAAGAAATCTGAGTAGGAATTTATGTAAGCATGAAAAGATTGATGAACTGTTGGAAGTTTTCCAAGTTCTGAGTATAAATAACTACTTCAATGATTTTGATAGATACCATTTAAGAATTTCATTCTTATGCAAGGCTGGAATGGTGAAAGAGGCCTATGGTGTTCTGCAGGAGATGAAGAAAAATGGATTTGCCCCTGATGTATCGTTTTACAATTCTGTCCTAGACGCATGTTGTAGAGAAGATCTACTTCGGCCTGCTAGAAAGCTGTGGGATGAGATGTTTGCTAGTGGCTGTGTTGGTAATTTAAAGACGTATAACATCCTTATTCAAAAGTTTTCAAAATCCAATCAAATCGAGGAAGCTTTGGTGCTTTACCGTCATATGCTTGGAAAAAAGGTCCAACCCGACATTACAATCTACACTTCCCTGCTTCAAGGGCTCTGTCAGGAATCGCAGCTTGAAGCTGCTTTTGAAGTCTTTAGCAAGTCTGTTGAACAGGATGTAAATCTTGCGGCAACCTTGCTGAGCACTTTTATCCTATGTCTTTGTAAAGCAGGCACGTTACTTTCCCTGTTAACTTGGATTCCAAACAATGCAGGTCATTTCCTTGCTGCTTCCAAATTACTCCGTGGTCTATCAAGCGACATTGCTCACCCAGACTCCCATGTAACTTTACTGAAATGTTTTGCAGATGCTGGAAAGGTTCCACTAGCTAAGCAACATATAGAATGGGTTCAAGAAACTTCTCCATCAATGTTGTCTGTTGTATCCACTGAGTTATTAGCATTTCTTCCTTCCTCTCCAAGAGCAGATCCAATTTTACAGATTCTTCAAACAATACAAGAACTGCCACGTTTCCGCAATTGA

Protein sequence

MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLLTHHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRSVIDSLIIGKKTHDALLVFNEVSDVIGSESCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATLLSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGKVPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN

Homology

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BLAST of CmUC11G211730.1 vs. NCBI nr
Match: XP_038884953.1 (pentatricopeptide repeat-containing protein At5g14080 [Benincasa hispida])

HSP 1 Score: 1172.1 bits (3031), Expect = 0.0e+00
Identity = 594/651 (91.24%), Postives = 613/651 (94.16%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPH+PELATRVSRAILSISN TSP GSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL
Sbjct: 1   MKPHIPELATRVSRAILSISNHTSPAGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           THHSLALGFFNWASQQPGFAHNS SYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV
Sbjct: 61  THHSLALGFFNWASQQPGFAHNSDSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSDVIGSESCNALLAALASDGFFEHAQKVFDEMSLKC 180
           Y SVIDSLIIGKKTHDA LVFNEV+DVIGSESCN+LLAALASDGFFEHAQKVF EMSLKC
Sbjct: 121 YCSVIDSLIIGKKTHDAFLVFNEVTDVIGSESCNSLLAALASDGFFEHAQKVFGEMSLKC 180

Query: 181 IPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEA 240
           IPFNTLGFGVFIWRVCRNTDVVKVLNM+DDART+NSEINGSVIATLIIHGLCGASRLAEA
Sbjct: 181 IPFNTLGFGVFIWRVCRNTDVVKVLNMIDDARTNNSEINGSVIATLIIHGLCGASRLAEA 240

Query: 241 SNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFA 300
           SNILDELKNRGCKPDFLTYWILGEAF+S G+VVDREKILKKKRKLGVAPRLN+YKEYLFA
Sbjct: 241 SNILDELKNRGCKPDFLTYWILGEAFRSSGNVVDREKILKKKRKLGVAPRLNEYKEYLFA 300

Query: 301 LIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTL 360
           LIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVAS+DP+SAI+FFK MVEKGRFPTL
Sbjct: 301 LIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASIDPYSAIIFFKFMVEKGRFPTL 360

Query: 361 LTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQE 420
           LTLRNLSRNLCKH KIDELLEV+QVLS NNYFNDFDRYHLRISFLCKAGMVKEAYGVLQE
Sbjct: 361 LTLRNLSRNLCKHGKIDELLEVYQVLSRNNYFNDFDRYHLRISFLCKAGMVKEAYGVLQE 420

Query: 421 MKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQ 480
           MKKNGF PDVSFYNSVL+ CCREDLLRPA+KLWDEMFASGC GNLKTYNILIQKFSKSNQ
Sbjct: 421 MKKNGFTPDVSFYNSVLETCCREDLLRPAKKLWDEMFASGCDGNLKTYNILIQKFSKSNQ 480

Query: 481 IEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATLLST 540
           IEEALVLY HMLGK V+PDITIY SLLQGLCQ SQLEAAFEVFSKSVEQDVNLA TLLST
Sbjct: 481 IEEALVLYHHMLGKSVEPDITIYMSLLQGLCQHSQLEAAFEVFSKSVEQDVNLAGTLLST 540

Query: 541 FILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGKVPL 600
           FILCLCK              AGHFLAASKLL GLSSDIAHP +HVTLLK FADAGKVPL
Sbjct: 541 FILCLCK--------------AGHFLAASKLLCGLSSDIAHPVTHVTLLKGFADAGKVPL 600

Query: 601 AKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           AKQH+EWVQETSPSMLSV+S+ELLAFLPSSPRAD ILQILQTIQEL RF N
Sbjct: 601 AKQHLEWVQETSPSMLSVISSELLAFLPSSPRADQILQILQTIQELSRFSN 637

[Close]

BLAST of CmUC11G211730.1 vs. NCBI nr
Match: KAG7015944.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1150.2 bits (2974), Expect = 0.0e+00
Identity = 585/670 (87.31%), Postives = 619/670 (92.39%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR ILSISN T P GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLSRQFGAIHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF E   V+ VIGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
           +EASNILDELKNRGCKPDFLTYWILGEA+QS GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF KLMVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K+DELLEV+Q+LS +NYF+D+DRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDV+LA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAG-TLLSL---------------LTWIPNNAGHFLAASKLLRGLSSDIAH 600
           LSTFILCLCKAG +LL L               L W+ N AGHFLAASKLLRGL+SDIAH
Sbjct: 541 LSTFILCLCKAGKSLLWLILDQKTVLYSIFSFNLAWVQNTAGHFLAASKLLRGLTSDIAH 600

Query: 601 PDSHVTLLKCFADAGKVPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQ 652
           PDSHVTLLK FADAG+VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQ
Sbjct: 601 PDSHVTLLKGFADAGEVPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQ 660

[Close]

BLAST of CmUC11G211730.1 vs. NCBI nr
Match: KAG6578360.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1139.4 bits (2946), Expect = 0.0e+00
Identity = 577/654 (88.23%), Postives = 609/654 (93.12%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR ILSISN T P GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLSRQFGAIHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF E   V+ VIGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
           +EASNILDELKNRGCKPDFLTYWILGEA+QS GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSVGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF KLMVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K+DELLEV+Q+LS +NYF+D+DRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDV+LA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK              AGHFLAASKLLRGL+SDIAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------AGHFLAASKLLRGLTSDIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN 640

[Close]

BLAST of CmUC11G211730.1 vs. NCBI nr
Match: XP_022939514.1 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 577/654 (88.23%), Postives = 608/654 (92.97%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR ILSISN T P GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLSRQFGAIHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF E   V+ VIGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTRVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
            EASNILDELKNRGCKPDFLTYWILGEA+QS GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 PEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF KLMVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K+DELLEV+Q+LS +NYF+D+DRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDV+LA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK              AGHFLAASKLLRGL+SDIAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------AGHFLAASKLLRGLTSDIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN 640

[Close]

BLAST of CmUC11G211730.1 vs. NCBI nr
Match: XP_023550678.1 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 576/654 (88.07%), Postives = 607/654 (92.81%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR ILSISN T P GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLS QFGAIHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSCQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSD---VIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF EV+    VIGSE CN+LLAALASDGFF+HAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKEVTSVTHVIGSEPCNSLLAALASDGFFDHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
           +EASNILDELKNRGCKPDFLTYWILGEA+QS GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF KLMVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH KIDELLEV+QVLS +NYF+D+DRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKIDELLEVYQVLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDVNLA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK              AGHFLAASKLLRGL+SDIAHPDSH TLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------AGHFLAASKLLRGLTSDIAHPDSHATLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN 640

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot
Match: Q9FMU2 (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana OX=3702 GN=At5g14080 PE=2 SV=2)

HSP 1 Score: 633.6 bits (1633), Expect = 2.4e-180
Identity = 316/642 (49.22%), Postives = 447/642 (69.63%), Query Frame = 0


Query: 7   ELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLLTHHSLA 66
           ELA R+ R +L +S  +     W+P +EQ+LH LGFR +++PSLV++VIDP LL HHSLA
Sbjct: 6   ELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLA 65

Query: 67  LGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRSVID 126
           LGFFNWA+QQPG++H+S SY SI KSLSLSRQF A+ +L KQVK+ KI LD SVYRS+ID
Sbjct: 66  LGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLID 125

Query: 127 SLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMSLKCIPF 186
           +L++G+K   A  V  E       I  + CN LLA L SDG +++AQK+F +M  K +  
Sbjct: 126 TLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSL 185

Query: 187 NTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNI 246
           NTLGFGV+I   CR+++  ++L ++D+ +  N  INGS+IA LI+H LC  SR  +A  I
Sbjct: 186 NTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYI 245

Query: 247 LDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIA 306
           L+EL+N  CKPDF+ Y ++ EAF   G++ +R+ +LKKKRKLGVAPR +DY+ ++  LI+
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305

Query: 307 GRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTL 366
            +R+ EAKE+ EVIV G FPMD ++ + LIGSV+++DP SA+ F   MV  G+ P + TL
Sbjct: 306 AKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTL 365

Query: 367 RNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKK 426
             LS+NLC+H+K D L++ +++LS   YF++   Y L ISFLCKAG V+E+Y  LQEMKK
Sbjct: 366 SKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKK 425

Query: 427 NGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEE 486
            G APDVS YN++++ACC+ +++RPA+KLWDEMF  GC  NL TYN+LI+K S+  + EE
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485

Query: 487 ALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQD-VNLAATLLSTFI 546
           +L L+  ML + ++PD TIY SL++GLC+E+++EAA EVF K +E+D   +   +LS F+
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545

Query: 547 LCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGKVPLAK 606
           L LC              + GH   AS+LLR     + H  +HV LLKC ADA +V +  
Sbjct: 546 LNLC--------------SNGHSGEASQLLRE-REHLEHTGAHVVLLKCVADAKEVEIGI 605

Query: 607 QHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQ 645
           +H++W++E SPS++  +S++LLA   SS   D IL  ++ I+
Sbjct: 606 RHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.8e-37
Identity = 112/445 (25.17%), Postives = 202/445 (45.39%), Query Frame = 0


Query: 85  SYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRSVIDSLIIGKKTHDAL-LVFNE 144
           +Y  ++  L   ++     SLL ++ +  + LD   Y  +ID L+ G+    A  LV   
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 145 VSDVIGSE--SCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGFGVFIWRVCRNTDV 204
           VS  I  +    +  +  ++ +G  E A+ +FD M    +      +   I   CR  +V
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 205 VKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELKNRGCKPDFLTYWI 264
            +   +L + +  N  I+     T ++ G+C +  L  A NI+ E+   GC+P+ + Y  
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 458

Query: 265 LGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICEAKE-LGEVIVKG 324
           L + F       D  ++LK+ ++ G+AP +  Y   +  L   +R+ EA+  L E++  G
Sbjct: 459 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 518

Query: 325 NFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTLRNLSRNLCKHEKIDELL 384
             P        + G + + +  SA  + K M E G  P  +    L    CK  K+ E  
Sbjct: 519 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 578

Query: 385 EVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVSFYNSVLDAC 444
             ++ +       D   Y + ++ L K   V +A  + +EM+  G APDV  Y  +++  
Sbjct: 579 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 638

Query: 445 CREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLYRHMLGKKVQPDI 504
            +   ++ A  ++DEM   G   N+  YN+L+  F +S +IE+A  L   M  K + P+ 
Sbjct: 639 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 698

Query: 505 TIYTSLLQGLCQESQLEAAFEVFSK 526
             Y +++ G C+   L  AF +F +
Sbjct: 699 VTYCTIIDGYCKSGDLAEAFRLFDE 722

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-36
Identity = 112/466 (24.03%), Postives = 221/466 (47.42%), Query Frame = 0


Query: 75  QQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV--YRSVIDSLIIGK 134
           Q  G  HN  +Y  ++       Q     ++L   K  K+G + ++    S+++     K
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLG--KMMKLGYEPNIVTLSSLLNGYCHSK 167

Query: 135 KTHDALLVFNEVSDVIGSE----SCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGF 194
           +  +A+ + +++  V G +    + N L+  L        A  + D M  K    + + +
Sbjct: 168 RISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 227

Query: 195 GVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELK 254
           GV +  +C+  D     N+L+       E  G +I   II GLC    + +A N+  E++
Sbjct: 228 GVVVNGLCKRGDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKEME 287

Query: 255 NRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRIC 314
            +G +P+ +TY  L     + G   D  ++L    +  + P +  +   + A +   ++ 
Sbjct: 288 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 347

Query: 315 EAKELGEVIVKGNF-PMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTLRNLS 374
           EA++L + +VK +  P     S+++ G         A   F+ MV K  FP ++T   L 
Sbjct: 348 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 407

Query: 375 RNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFA 434
           +  CK+++++E +EVF+ +S      +   Y++ I  L +AG    A  + +EM  +G  
Sbjct: 408 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 467

Query: 435 PDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVL 494
           P++  YN++LD  C+   L  A  +++ +  S     + TYNI+I+   K+ ++E+   L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 495 YRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNL 534
           + ++  K V+PD+  Y +++ G C++   E A  +F K +++D  L
Sbjct: 528 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF-KEMKEDGTL 568

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-36
Identity = 131/530 (24.72%), Postives = 228/530 (43.02%), Query Frame = 0


Query: 64  SLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRS 123
           S AL  FN AS++P F+     Y+ IL  L  S  F  +  +L+ +K+ +  +  S +  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 124 VIDSLIIGKKTHDALLVFNEVSDVIG----SESCNALLAALASDGFFEHAQKVFDEMSLK 183
           +I+S    +   + L V + + D  G    +   N +L  L      +  +    +MS+ 
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 184 CIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDART------------------DNSEING- 243
            I  +   F V I  +CR   +   + ML+D  +                  +  +++G 
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 244 ---------------SVIATLIIHGLCGASRLAEASNILDELKNR-GCKPDFLTYWILGE 303
                          +V   +I+HG C   R+ +A N + E+ N+ G  PD  T+  L  
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 304 AFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICEAKELGEVIVKGNFPM 363
                G V    +I+    + G  P +  Y   +  L     + EA E+ + ++  +   
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 364 DEEVSNVLIGSVASMDP-HSAIMFFKLMVEKGRFPTLLTLRNLSRNLCKHEKIDELLEVF 423
           +    N LI ++   +    A    +++  KG  P + T  +L + LC        +E+F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 424 QVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVSFYNSVLDACCRE 483
           + +       D   Y++ I  LC  G + EA  +L++M+ +G A  V  YN+++D  C+ 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 484 DLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLYRHMLGKKVQPDITIY 543
           +  R A +++DEM   G   N  TYN LI    KS ++E+A  L   M+ +  +PD   Y
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 544 TSLLQGLCQESQLEAAFEVF----SKSVEQDVNLAATLLSTFILCLCKAG 550
            SLL   C+   ++ A ++     S   E D+    TL+S     LCKAG
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG----LCKAG 589

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.1e-35
Identity = 108/461 (23.43%), Postives = 212/461 (45.99%), Query Frame = 0


Query: 75  QQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGL--DLSVYRSVIDSLIIGK 134
           Q  G +HN  +Y  ++       Q     ++L   K  K+G   D+    S+++    G 
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVL--AKMMKLGYEPDIVTLNSLLNGFCHGN 167

Query: 135 KTHDALLVFNEVSDV---IGSESCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGFG 194
           +  DA+ +  ++ ++     S + N L+  L        A  + D M +K    + + +G
Sbjct: 168 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 227

Query: 195 VFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELKN 254
           + +  +C+  D+   L++L        E  G VI   II  LC    + +A N+  E+ N
Sbjct: 228 IVVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKNVNDALNLFTEMDN 287

Query: 255 RGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICE 314
           +G +P+ +TY  L     + G   D  ++L    +  + P +  +   + A +   ++ E
Sbjct: 288 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 347

Query: 315 AKELGEVIVKGNFPMDEEVSNVLIGSVASMDP-HSAIMFFKLMVEKGRFPTLLTLRNLSR 374
           A++L + ++K +   D    + LI      D    A   F+LM+ K  FP ++T   L +
Sbjct: 348 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 407

Query: 375 NLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAP 434
             CK +++DE +E+F+ +S      +   Y   I    +A     A  V ++M  +G  P
Sbjct: 408 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 467

Query: 435 DVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLY 494
           D+  Y+ +LD  C    +  A  +++ +  S    ++ TYNI+I+   K+ ++E+   L+
Sbjct: 468 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 527

Query: 495 RHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQ 530
             +  K V+P++  YT+++ G C++   E A  +F +  E+
Sbjct: 528 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL
Match: A0A6J1FHE2 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445400 PE=4 SV=1)

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 577/654 (88.23%), Postives = 608/654 (92.97%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR ILSISN T P GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTILSISNHTRPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLSRQFGAIHSLLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHSLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF E   V+ VIGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKELTSVTRVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
            EASNILDELKNRGCKPDFLTYWILGEA+QS GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 PEASNILDELKNRGCKPDFLTYWILGEAYQSAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+GNFPMDE+VSNVLIGSVA++DP SAIMF KLMVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRGNFPMDEDVSNVLIGSVAAIDPSSAIMFLKLMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K+DELLEV+Q+LS +NYF+D+DRYHLRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQLLSKHNYFDDYDRYHLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNILIQKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDV+LA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVDLAGTL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK              AGHFLAASKLLRGL+SDIAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------AGHFLAASKLLRGLTSDIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN 640

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL
Match: A0A6J1JUL2 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489037 PE=4 SV=1)

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 571/654 (87.31%), Postives = 604/654 (92.35%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           MKPHL ELATRVSR +LSISN TSP GSWTPSLEQNLHRLGFR+TLNPSLVSQVIDPHLL
Sbjct: 1   MKPHLQELATRVSRTVLSISNHTSPAGSWTPSLEQNLHRLGFRETLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGFAHNS SYKS+LKSLSLSRQFGAIH LLKQVKTQ+IGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFAHNSESYKSVLKSLSLSRQFGAIHCLLKQVKTQRIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSD---VIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           Y SVIDSLIIGKKTHDA LVF EV+    VIGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YHSVIDSLIIGKKTHDAFLVFKEVTSVTHVIGSEPCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWRVCRN DVVKVLNMLDDA T+NSEINGSV+ATLIIHGLCGASRL
Sbjct: 181 LKGIPFNTLGFGVFIWRVCRNADVVKVLNMLDDAMTNNSEINGSVVATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
           +EASNILDELKNRGCKPDFLTYWILGEA++  GSVVDREK LKKKRKLGVAPRL+DYKE+
Sbjct: 241 SEASNILDELKNRGCKPDFLTYWILGEAYRLAGSVVDREKTLKKKRKLGVAPRLHDYKEF 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAGRRICEAKELGEVIV+ NFPMDE+VSNVLIGSVA++DP SAIMF   MVEK RF
Sbjct: 301 LFALIAGRRICEAKELGEVIVRANFPMDEDVSNVLIGSVAAIDPSSAIMFLMFMVEKERF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K+DELLEV+QVLS +NYF+D+DRY LRISFLCKAGMVKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKLDELLEVYQVLSKHNYFDDYDRYRLRISFLCKAGMVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPDV FYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTYNIL+QKFSK
Sbjct: 421 LQEMKKNGFAPDVYFYNSVLEACCREDLLRPARKLWDEMFASGCGGNLKTYNILVQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQ+EEALVLYRHMLGKKV+PDITIYTSLLQGLCQESQLEAAFEVFSK VEQDVNLA TL
Sbjct: 481 SNQMEEALVLYRHMLGKKVEPDITIYTSLLQGLCQESQLEAAFEVFSKCVEQDVNLAGTL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK              AGHFLAASKLLRGL+SDIAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------AGHFLAASKLLRGLTSDIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWVQETSPSMLSV+S+ELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVQETSPSMLSVISSELLAFLPSSPKADPILQILQTIQELSRFNN 640

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL
Match: A0A0A0LMX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405040 PE=4 SV=1)

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 572/652 (87.73%), Postives = 599/652 (91.87%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           M+PH PELATR+SRAILSISN+TSP GSWTPSLEQNLHRLGFRQ LNPSLVSQVIDPHLL
Sbjct: 1   MRPHFPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQMLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +HHSLALGFFNWASQQPGF HNS SY SILKSLSLSR FG IHSLLKQVKTQKIGLDLSV
Sbjct: 61  SHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSD---VIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           YR+VIDSLII KKTHDA LVFNEV+    +IGSE CN+LLAALASDGFFEHAQKVFDEMS
Sbjct: 121 YRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LK IPFNTLGFGVFIWR+CRNTDVVKVLNM+D ART+NS+INGSVIATLIIHGLC ASRL
Sbjct: 181 LKSIPFNTLGFGVFIWRICRNTDVVKVLNMIDGARTNNSDINGSVIATLIIHGLCEASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
            EASNILDELKNRGCKPDFLTYWILGEAFQS  +VVDREKILKKKRKLGVAPRLNDYKEY
Sbjct: 241 EEASNILDELKNRGCKPDFLTYWILGEAFQSARNVVDREKILKKKRKLGVAPRLNDYKEY 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LF LIAGRRI EAKELGEVIVKGNFPMDEEVSNVLIGSVAS+DP+SAIMFFK MVEKGRF
Sbjct: 301 LFVLIAGRRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGRF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K DELLEVFQVL INNYFND DRYHLRISFLCKAG VKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKTDELLEVFQVLCINNYFNDLDRYHLRISFLCKAGKVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGF PDVSFYNSVL+ACCREDLLRPARKLWDEMFA GC GNLKTY+ILIQKFSK
Sbjct: 421 LQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQIEEALVLY HMLGK V+PDI IYTSLLQGLCQ+SQLEAAFEVFSKSVEQDVNLAATL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK               GHFLAASKLLRGL+SD+AHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------VGHFLAASKLLRGLASDVAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRF 650
           V LAKQH+EWVQETSPSMLSV+STELLAFLPSSP+ADPIL+ILQT+QEL RF
Sbjct: 601 VSLAKQHVEWVQETSPSMLSVISTELLAFLPSSPKADPILEILQTVQELSRF 638

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL
Match: A0A1S3B2P5 (pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485468 PE=4 SV=1)

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 571/654 (87.31%), Postives = 599/654 (91.59%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           M+PHLPELATR+SRAILSISN+TSP GSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL
Sbjct: 1   MRPHLPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +H+SLALGFFNWASQQPGF HNS SY SILKSLSLSR FG IHSLLKQVKTQKIGLDLSV
Sbjct: 61  SHYSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSD---VIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           YRSVIDSLII KKTHDA LVFNEV+    +IGSE CN+LLAAL+SDGF+E A KVFDEMS
Sbjct: 121 YRSVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALSSDGFYEQATKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LKCIPFNTLG GVFIW+VCRNTDVVKVLNM+DD RT+NS++NGS+IATLIIHGLCGASRL
Sbjct: 181 LKCIPFNTLGLGVFIWKVCRNTDVVKVLNMIDDVRTNNSDVNGSIIATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
            EASNILDELKNRGCKPDFLTYWILGEAFQS G+VVDREKILKKKRKLGVAPRLNDYKEY
Sbjct: 241 VEASNILDELKNRGCKPDFLTYWILGEAFQSAGNVVDREKILKKKRKLGVAPRLNDYKEY 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAG+RI EAKELGEVIVKGNFPMDEEVSNVLIGSVAS+DP+SAIMFFK MVEKGRF
Sbjct: 301 LFALIAGKRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGRF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K DELLEVFQVL I NYFND DRYHLRISFLCKAG VKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKTDELLEVFQVLCIKNYFNDLDRYHLRISFLCKAGKVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPD SFYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTY+ILIQKFSK
Sbjct: 421 LQEMKKNGFAPDASFYNSVLEACCREDLLRPARKLWDEMFASGCSGNLKTYSILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQIEEALVLY HMLGK V+PDI IYTSLLQGLCQ SQLE AFEVFSKSVEQDVNLAATL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQGSQLETAFEVFSKSVEQDVNLAATL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILCLCK               GHF AASKLLRGL+S IAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILCLCK--------------VGHFHAASKLLRGLASGIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWV ETSPSMLSV+STELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVHETSPSMLSVISTELLAFLPSSPKADPILQILQTIQELSRFSN 640

[Close]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL
Match: A0A5D3BUE5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00230 PE=4 SV=1)

HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 567/654 (86.70%), Postives = 595/654 (90.98%), Query Frame = 0


Query: 1   MKPHLPELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60
           M+PHLPELATR+SRAILSISN+TSP GSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL
Sbjct: 1   MRPHLPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLL 60

Query: 61  THHSLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV 120
           +H+SLALGFFNWASQQPGF HNS SY SILKSLSLSR FG IHSLLKQVKTQKIGLDLSV
Sbjct: 61  SHYSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120

Query: 121 YRSVIDSLIIGKKTHDALLVFNEVSD---VIGSESCNALLAALASDGFFEHAQKVFDEMS 180
           YRSVIDSLII KKTHDA LVFNEV+    +IGSE CN+LLAAL+SDGF+E A KVFDEMS
Sbjct: 121 YRSVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALSSDGFYEQATKVFDEMS 180

Query: 181 LKCIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRL 240
           LKCIPFNTLG GVFIW+VCRNTDVVKVLNM+DD RT+NS++NGS+IATLIIHGLCGASRL
Sbjct: 181 LKCIPFNTLGLGVFIWKVCRNTDVVKVLNMIDDVRTNNSDVNGSIIATLIIHGLCGASRL 240

Query: 241 AEASNILDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEY 300
            EASNILDELKNRGCKPDFLTYWILGEAFQS G+VVDREKILKKKRKLGVAPRLNDYKEY
Sbjct: 241 VEASNILDELKNRGCKPDFLTYWILGEAFQSAGNVVDREKILKKKRKLGVAPRLNDYKEY 300

Query: 301 LFALIAGRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRF 360
           LFALIAG+RI EAKELGEVIVKGNFPMDEEVSNVLIGSVAS+DP+SAIMFFK MVEKGRF
Sbjct: 301 LFALIAGKRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGRF 360

Query: 361 PTLLTLRNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGV 420
           PTLLTLRNLSRNLCKH K DELLEVFQVL I NYFND DRYHLRISFLCKAG VKEAYGV
Sbjct: 361 PTLLTLRNLSRNLCKHGKTDELLEVFQVLCIKNYFNDLDRYHLRISFLCKAGKVKEAYGV 420

Query: 421 LQEMKKNGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSK 480
           LQEMKKNGFAPD SFYNSVL+ACCREDLLRPARKLWDEMFASGC GNLKTY+ILIQKFSK
Sbjct: 421 LQEMKKNGFAPDASFYNSVLEACCREDLLRPARKLWDEMFASGCSGNLKTYSILIQKFSK 480

Query: 481 SNQIEEALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNLAATL 540
           SNQIEEALVLY HMLGK V+PDI IYTSLLQGLCQ SQLE AFEVFSKSVEQDVNLAATL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQGSQLETAFEVFSKSVEQDVNLAATL 540

Query: 541 LSTFILCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGK 600
           LSTFILC                   HF AASKLLRGL+S IAHPDSHVTLLK FADAG+
Sbjct: 541 LSTFILC-------------------HFHAASKLLRGLASGIAHPDSHVTLLKGFADAGE 600

Query: 601 VPLAKQHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQELPRFRN 652
           VPLAKQH+EWV ETSPSMLSV+STELLAFLPSSP+ADPILQILQTIQEL RF N
Sbjct: 601 VPLAKQHVEWVHETSPSMLSVISTELLAFLPSSPKADPILQILQTIQELSRFSN 635

[Close]

BLAST of CmUC11G211730.1 vs. TAIR 10
Match: AT5G14080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 633.6 bits (1633), Expect = 1.7e-181
Identity = 316/642 (49.22%), Postives = 447/642 (69.63%), Query Frame = 0


Query: 7   ELATRVSRAILSISNRTSPTGSWTPSLEQNLHRLGFRQTLNPSLVSQVIDPHLLTHHSLA 66
           ELA R+ R +L +S  +     W+P +EQ+LH LGFR +++PSLV++VIDP LL HHSLA
Sbjct: 6   ELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLA 65

Query: 67  LGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRSVID 126
           LGFFNWA+QQPG++H+S SY SI KSLSLSRQF A+ +L KQVK+ KI LD SVYRS+ID
Sbjct: 66  LGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLID 125

Query: 127 SLIIGKKTHDALLVFNE---VSDVIGSESCNALLAALASDGFFEHAQKVFDEMSLKCIPF 186
           +L++G+K   A  V  E       I  + CN LLA L SDG +++AQK+F +M  K +  
Sbjct: 126 TLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSL 185

Query: 187 NTLGFGVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNI 246
           NTLGFGV+I   CR+++  ++L ++D+ +  N  INGS+IA LI+H LC  SR  +A  I
Sbjct: 186 NTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYI 245

Query: 247 LDELKNRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIA 306
           L+EL+N  CKPDF+ Y ++ EAF   G++ +R+ +LKKKRKLGVAPR +DY+ ++  LI+
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305

Query: 307 GRRICEAKELGEVIVKGNFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTL 366
            +R+ EAKE+ EVIV G FPMD ++ + LIGSV+++DP SA+ F   MV  G+ P + TL
Sbjct: 306 AKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTL 365

Query: 367 RNLSRNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKK 426
             LS+NLC+H+K D L++ +++LS   YF++   Y L ISFLCKAG V+E+Y  LQEMKK
Sbjct: 366 SKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKK 425

Query: 427 NGFAPDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEE 486
            G APDVS YN++++ACC+ +++RPA+KLWDEMF  GC  NL TYN+LI+K S+  + EE
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485

Query: 487 ALVLYRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQD-VNLAATLLSTFI 546
           +L L+  ML + ++PD TIY SL++GLC+E+++EAA EVF K +E+D   +   +LS F+
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545

Query: 547 LCLCKAGTLLSLLTWIPNNAGHFLAASKLLRGLSSDIAHPDSHVTLLKCFADAGKVPLAK 606
           L LC              + GH   AS+LLR     + H  +HV LLKC ADA +V +  
Sbjct: 546 LNLC--------------SNGHSGEASQLLRE-REHLEHTGAHVVLLKCVADAKEVEIGI 605

Query: 607 QHIEWVQETSPSMLSVVSTELLAFLPSSPRADPILQILQTIQ 645
           +H++W++E SPS++  +S++LLA   SS   D IL  ++ I+
Sbjct: 606 RHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632

[Close]

BLAST of CmUC11G211730.1 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 2.7e-38
Identity = 112/445 (25.17%), Postives = 202/445 (45.39%), Query Frame = 0


Query: 85  SYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRSVIDSLIIGKKTHDAL-LVFNE 144
           +Y  ++  L   ++     SLL ++ +  + LD   Y  +ID L+ G+    A  LV   
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 145 VSDVIGSE--SCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGFGVFIWRVCRNTDV 204
           VS  I  +    +  +  ++ +G  E A+ +FD M    +      +   I   CR  +V
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 205 VKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELKNRGCKPDFLTYWI 264
            +   +L + +  N  I+     T ++ G+C +  L  A NI+ E+   GC+P+ + Y  
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 458

Query: 265 LGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICEAKE-LGEVIVKG 324
           L + F       D  ++LK+ ++ G+AP +  Y   +  L   +R+ EA+  L E++  G
Sbjct: 459 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 518

Query: 325 NFPMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTLRNLSRNLCKHEKIDELL 384
             P        + G + + +  SA  + K M E G  P  +    L    CK  K+ E  
Sbjct: 519 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 578

Query: 385 EVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVSFYNSVLDAC 444
             ++ +       D   Y + ++ L K   V +A  + +EM+  G APDV  Y  +++  
Sbjct: 579 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 638

Query: 445 CREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLYRHMLGKKVQPDI 504
            +   ++ A  ++DEM   G   N+  YN+L+  F +S +IE+A  L   M  K + P+ 
Sbjct: 639 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 698

Query: 505 TIYTSLLQGLCQESQLEAAFEVFSK 526
             Y +++ G C+   L  AF +F +
Sbjct: 699 VTYCTIIDGYCKSGDLAEAFRLFDE 722

[Close]

BLAST of CmUC11G211730.1 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-37
Identity = 112/466 (24.03%), Postives = 221/466 (47.42%), Query Frame = 0


Query: 75  QQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSV--YRSVIDSLIIGK 134
           Q  G  HN  +Y  ++       Q     ++L   K  K+G + ++    S+++     K
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLG--KMMKLGYEPNIVTLSSLLNGYCHSK 167

Query: 135 KTHDALLVFNEVSDVIGSE----SCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGF 194
           +  +A+ + +++  V G +    + N L+  L        A  + D M  K    + + +
Sbjct: 168 RISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 227

Query: 195 GVFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELK 254
           GV +  +C+  D     N+L+       E  G +I   II GLC    + +A N+  E++
Sbjct: 228 GVVVNGLCKRGDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKEME 287

Query: 255 NRGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRIC 314
            +G +P+ +TY  L     + G   D  ++L    +  + P +  +   + A +   ++ 
Sbjct: 288 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 347

Query: 315 EAKELGEVIVKGNF-PMDEEVSNVLIGSVASMDPHSAIMFFKLMVEKGRFPTLLTLRNLS 374
           EA++L + +VK +  P     S+++ G         A   F+ MV K  FP ++T   L 
Sbjct: 348 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 407

Query: 375 RNLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFA 434
           +  CK+++++E +EVF+ +S      +   Y++ I  L +AG    A  + +EM  +G  
Sbjct: 408 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 467

Query: 435 PDVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVL 494
           P++  YN++LD  C+   L  A  +++ +  S     + TYNI+I+   K+ ++E+   L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 495 YRHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQDVNL 534
           + ++  K V+PD+  Y +++ G C++   E A  +F K +++D  L
Sbjct: 528 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF-KEMKEDGTL 568

[Close]

BLAST of CmUC11G211730.1 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 1.8e-37
Identity = 131/530 (24.72%), Postives = 228/530 (43.02%), Query Frame = 0


Query: 64  SLALGFFNWASQQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGLDLSVYRS 123
           S AL  FN AS++P F+     Y+ IL  L  S  F  +  +L+ +K+ +  +  S +  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 124 VIDSLIIGKKTHDALLVFNEVSDVIG----SESCNALLAALASDGFFEHAQKVFDEMSLK 183
           +I+S    +   + L V + + D  G    +   N +L  L      +  +    +MS+ 
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 184 CIPFNTLGFGVFIWRVCRNTDVVKVLNMLDDART------------------DNSEING- 243
            I  +   F V I  +CR   +   + ML+D  +                  +  +++G 
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 244 ---------------SVIATLIIHGLCGASRLAEASNILDELKNR-GCKPDFLTYWILGE 303
                          +V   +I+HG C   R+ +A N + E+ N+ G  PD  T+  L  
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 304 AFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICEAKELGEVIVKGNFPM 363
                G V    +I+    + G  P +  Y   +  L     + EA E+ + ++  +   
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 364 DEEVSNVLIGSVASMDP-HSAIMFFKLMVEKGRFPTLLTLRNLSRNLCKHEKIDELLEVF 423
           +    N LI ++   +    A    +++  KG  P + T  +L + LC        +E+F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 424 QVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAPDVSFYNSVLDACCRE 483
           + +       D   Y++ I  LC  G + EA  +L++M+ +G A  V  YN+++D  C+ 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 484 DLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLYRHMLGKKVQPDITIY 543
           +  R A +++DEM   G   N  TYN LI    KS ++E+A  L   M+ +  +PD   Y
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 544 TSLLQGLCQESQLEAAFEVF----SKSVEQDVNLAATLLSTFILCLCKAG 550
            SLL   C+   ++ A ++     S   E D+    TL+S     LCKAG
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG----LCKAG 589

[Close]

BLAST of CmUC11G211730.1 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-36
Identity = 108/461 (23.43%), Postives = 212/461 (45.99%), Query Frame = 0


Query: 75  QQPGFAHNSGSYKSILKSLSLSRQFGAIHSLLKQVKTQKIGL--DLSVYRSVIDSLIIGK 134
           Q  G +HN  +Y  ++       Q     ++L   K  K+G   D+    S+++    G 
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVL--AKMMKLGYEPDIVTLNSLLNGFCHGN 167

Query: 135 KTHDALLVFNEVSDV---IGSESCNALLAALASDGFFEHAQKVFDEMSLKCIPFNTLGFG 194
           +  DA+ +  ++ ++     S + N L+  L        A  + D M +K    + + +G
Sbjct: 168 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 227

Query: 195 VFIWRVCRNTDVVKVLNMLDDARTDNSEINGSVIATLIIHGLCGASRLAEASNILDELKN 254
           + +  +C+  D+   L++L        E  G VI   II  LC    + +A N+  E+ N
Sbjct: 228 IVVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKNVNDALNLFTEMDN 287

Query: 255 RGCKPDFLTYWILGEAFQSEGSVVDREKILKKKRKLGVAPRLNDYKEYLFALIAGRRICE 314
           +G +P+ +TY  L     + G   D  ++L    +  + P +  +   + A +   ++ E
Sbjct: 288 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 347

Query: 315 AKELGEVIVKGNFPMDEEVSNVLIGSVASMDP-HSAIMFFKLMVEKGRFPTLLTLRNLSR 374
           A++L + ++K +   D    + LI      D    A   F+LM+ K  FP ++T   L +
Sbjct: 348 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 407

Query: 375 NLCKHEKIDELLEVFQVLSINNYFNDFDRYHLRISFLCKAGMVKEAYGVLQEMKKNGFAP 434
             CK +++DE +E+F+ +S      +   Y   I    +A     A  V ++M  +G  P
Sbjct: 408 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 467

Query: 435 DVSFYNSVLDACCREDLLRPARKLWDEMFASGCVGNLKTYNILIQKFSKSNQIEEALVLY 494
           D+  Y+ +LD  C    +  A  +++ +  S    ++ TYNI+I+   K+ ++E+   L+
Sbjct: 468 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 527

Query: 495 RHMLGKKVQPDITIYTSLLQGLCQESQLEAAFEVFSKSVEQ 530
             +  K V+P++  YT+++ G C++   E A  +F +  E+
Sbjct: 528 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565

The following BLAST results are available for this feature:

BLAST of CmUC11G211730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884953.1	0.0e+00	91.24	pentatricopeptide repeat-containing protein At5g14080 [Benincasa hispida]	[more]
KAG7015944.1	0.0e+00	87.31	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6578360.1	0.0e+00	88.23	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022939514.1	0.0e+00	88.23	pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita mosc...	[more]
XP_023550678.1	0.0e+00	88.07	pentatricopeptide repeat-containing protein At5g14080 isoform X1 [Cucurbita pepo...	[more]

BLAST of CmUC11G211730.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU2	2.4e-180	49.22	Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana OX...	[more]
Q9FIT7	3.8e-37	25.17	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]
Q9SXD1	1.9e-36	24.03	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9LFF1	2.5e-36	24.72	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9CAN0	2.1e-35	23.43	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]

BLAST of CmUC11G211730.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHE2	0.0e+00	88.23	pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1JUL2	0.0e+00	87.31	pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucurbita ma...	[more]
A0A0A0LMX0	0.0e+00	87.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405040 PE=4 SV=1	[more]
A0A1S3B2P5	0.0e+00	87.31	pentatricopeptide repeat-containing protein At5g14080 isoform X1 OS=Cucumis melo...	[more]
A0A5D3BUE5	0.0e+00	86.70	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmUC11G211730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14080.1	1.7e-181	49.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G61990.1	2.7e-38	25.17	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62670.1	1.4e-37	24.03	rna processing factor 2	[more]
AT3G53700.1	1.8e-37	24.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63130.1	1.5e-36	23.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 225..255 e-value: 1.1E-4 score: 20.1 coord: 467..500 e-value: 8.0E-7 score: 26.9 coord: 433..464 e-value: 3.1E-5 score: 21.9 coord: 502..531 e-value: 8.6E-4 score: 17.3 coord: 401..430 e-value: 4.0E-7 score: 27.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 428..476 e-value: 5.1E-11 score: 42.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 225..252 e-value: 0.23 score: 11.8 coord: 402..426 e-value: 8.6E-5 score: 22.5 coord: 152..177 e-value: 0.0012 score: 18.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 496..525 e-value: 1.6E-5 score: 24.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 464..498 score: 11.509422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 499..533 score: 9.569272
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 9.558311
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 394..428 score: 10.796938
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 429..463 score: 10.687325
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 224..287 e-value: 2.4E-7 score: 32.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 61..223 e-value: 5.8E-17 score: 64.1 coord: 445..562 e-value: 1.6E-22 score: 82.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 292..444 e-value: 6.7E-19 score: 70.4
None	No IPR available	PANTHER	PTHR47938:SF25	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 4..645
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 4..645

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC11G211730	CmUC11G211730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC11G211730.1-exon	CmUC11G211730.1-exon-CmU531Chr11:8020631..8020924	exon
CmUC11G211730.1-exon	CmUC11G211730.1-exon-CmU531Chr11:8021194..8022855	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC11G211730.1-cds	CmUC11G211730.1-cds-CmU531Chr11:8020631..8020924	CDS
CmUC11G211730.1-cds	CmUC11G211730.1-cds-CmU531Chr11:8021194..8022855	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC11G211730.1	CmUC11G211730.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding