CmUC04G069830.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC04G069830.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Thioredoxin
Location	CmU531Chr04: 6454523 .. 6458857 (-)
Sequence length	714
RNA-Seq Expression	CmUC04G069830.1
Synteny	CmUC04G069830.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCACATGCTTCCATCCCCAACTCAGCTTTCGGATAAGAACCTCAAAAACTTTCCCTTCCACAGTTCCACAACACAACAAAACCCATCTCTTCTCTCTCAATTTCAAATCCCAAAAGAAACCCTAAAAACACATACAAGGAAGAAGGTAAAACAGAGAGAAATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTATTTCTCTATCTTCCATTCCGTACCAAGGGTTTTTTCGTAATTTCACCTTTTTTTTTTTCTTAATTACAAATTTAGTCTTGTAATTTAATTTATATGGTCTAGGATTTCAAATTAGTTTTTGTGGTTAGTGTTTTTGTTTTTTAGTTTTCTAAATTTGTTTTCTTTCTTGCCAAATTCAACATTTTAGTGGTGTATATTTGAGCTCGATTTAGTTTCTTCGTTGTGTTTTCAAAATCTAAGTCAAGTTTTGAAGATTTGTTTATGGTTTTTTAAATATTTGAGGGTGACTTATAAAATTATTAAAATCACTTTTGTTATTTTCAAAACCGATTCAAAAATTTTTATTAATTCAAAATCAATTTTAATAATATGAAAATTAGGTTGAAAAGTATAAAATGAAATATTGAATTGATTTCAATAATTAAATATGTGTTTTAAAAAAGTTTTAAATATGATAAAAGTGATTAACCTATTTCTTTTTATCCTTTTATAATATGATTAAGAATTGAAATATTTAGTAAGAAAAAGATGGAATTTTTATGAGCAATTTTCAAAAATAAAATGATTGGTTAAGTCTTTTAAGTTTTTGTATTCATCATTGTAATAAATTAAGTATCTGATATGATTGAACAAATGGGCAAATAGGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAGTAACTCTTCCATGCTATCTCCTAAGTCTTACAAAATAAATCTTAATTTTAAGATATACTTCTTAGGAAAAATATCTTTTTTTTCGAAAAATTATTATGAATAGAAAAAATATTAAACTATTTACAAATATAAAAAAATTTCACTTTCTATTAGTGATAGATTGCGATAGACTTCTATAACTAAACAATCTATTGCCGAGTGATAGAAGTCTACCGTGGTCTATCGCTGATTAACAGTGAATACTATATATATTTGAAAACAACCATTTTTTTAGTCTCTAGATTTTGGATTTAGTTTGAAAATGTTGCATTTTTAATCTTAAGTTTTGAGTTTGCTTTCATTTTAGCTTCTAGATTTCAGAATTTTACAATTTTATCGTGAGATTTGAGTTTTGTTTTAATTTAGTTTCGAGATTTCAATATTTATGCTTTTAACCTTATTTTTCACTAAATACTTCCTTTTAGTCCTTAGTGTTAATCATTAATTAATTCAAAATAACAAAAAGAATTCTAATGAATTGAGTTTCACAATCTTTTATCACTACAAAAATAAATTTCAATTTCAATTCATAATTATTTTAAATTAATTAATAGAAATTAGCACCAATGACTTGAGAGAGTATTTTGTGTAATAAAAATAAATAAAAAATAAAAAATAAAATCGAAGTTAAGAGTGTAAATCTTGAAACCTATAAACAAAATTGAAAAAATACTCAAATCTCAAGAATAAAATTGTAACATTTTGAAACTTAGAGATTAAATTAAAATCAAATTCAAAACGTAACAACTAAAATGTAATATTTTGATTTTATATGCACAAATAATTTACATACTAATTATTGTGAACAAATAAATATTTCAGAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCAGTAAGTATATTCTATAAGTCCTTTTTTGAGCTTCTTCGAATGGTCAGAAATAACTCTTTTTTCTAAAATTCATTAAAATAATATTTTTTTAGTTTATCTCGGCGGGGATCAACACCAAAATTTAGATAAAAAGTTAACTTTTTTGTAACTTATCGATTGTTTTGGACTTTTTGAGATATATTTCGGTCAAATTTTCTCCAAATTAAGTTAGCTTTACCAAATATTATATCAAATCTTTAGCCCAATTTATGTTTCCACAATTATCTAAATTTTTAAATCTACAAATGAATTTTTTAGATGGATCTGAAGTGATGGACTTGTGATTTTTAAAATTTAGAAAAGACAAATTTTGTGAATTAAATAAGATATGAGAAATATATAGAATCTCGACGTTACTTTCTCAACATTAATATTGAGATTTTATATATTTCTCAAATCTACTGAATTTTGTACGAAAATTTATCTTTTTGAAAAATTTAAAAATGCAATCACTTGATCCACTTAGAAAATCTATTTACTTAATTGGTAAAGTCATTTAGCAATTTGGAAATTCTTATAACCGTGGAAATAGAAATTAGGCTAAAGATTTGAAGAATTAGGTAAGTTTGATATAATATTTGGTAAAGATAACCGAATTTAGAGAAAATTTGAAAAGATATAAGATTTGGTATAAGATTCAAGAAGATTACATAATATTTGAAAAAATTAGTAGAATCTCGGTGGTACTACCCGAGAACACAAACCCATCGATGAGTTAGAACAAGTTATCTTCTTATTAAATGTTTGTGGTTGATCTTGGCCGAGATGGACCAAAAGAAAAACTATTTTAATGTTTTTTTTCAAAAAATGCTAGTTTTGAAAGATCGAAACTTGCAAGTGCTATTTCTGACCATTTTCCTAACTTTTTTCTAATTATGTTTGTTTGACAATTCATGTATTTTCTCATTCTGCAGAAAATGCCAACAATTCAGGTGACCACATTTTATTAATTCTCACTTTGACATGAATTTTGACACAAAAAAAAAAAAAAAAAAAATTGCTTATAGGTCGTATTTTTTTCGGTTAAAATATTATTTTCGTCTATATATTTTAGGACTTATTCTATTTTAGTTCATATATTTTTAAATATTCAAATTTTGGCCCTATACTTTTAAAAGATCTTTAAAATAGTCATTTGTAGACTAGTAGTAAGACTTTTCATGCAGGAAAGTCACAATGTGGATATGTTTGCAAAGATTTATAGATGAAAGACTAATTAACTTTTTTTGAAAAAAAATAATAATGGCCATAAGTTAGTAGTATGGATTAATTTTAAGGTTTCTTAGAAAGTATTTAGCTATATGAAAGTACATGAATCAAATAGGACAAGTCCCAAAGTAGTTTAAAATAATATTTTGATCCATTACTTTTAGGTAATATTTTTATGAAAATTATTATTATTATTATTATTATTATTATTATTATTATTAAGATTTATTGAAAGTCACATGAATTTTTTTAGGACAAAATAAAATGAAATTTAAACTATATGTATAAAGACCAAATGCTTAAGCCAAAAGCACTTTTTGTACTTCCTAACAAAACTATTCTAAGTGCACGTTTGAAAGCTATGGATCAAGTCGTAATTTTTTTTATTTAAAAAAAAAAAAAAAAAAAAAAAGAGAGAAATTTAGGTACAAAGTACAAATTGATTTTCATATAAACGGTTGATGTTTGGTTTCAAACTCTTAAAACGATTCATATATTTAAAAGTAATTTTTAGTTATTAGTTTGGTGTGAGAAGTGATTTTAAAATTACCAAATTACTAAAAAGTGATTTCACTATAGGGGCAAATTTGGTATTTTTGCAAAATCTTATGGTGATTTCTAATCAATCACACCATCAAGCGTCATCTCTCAACTAATTATTGAAAAATCAATTTTAAATAATTTAAATTTTCTTGAATCAATTTCAACATATGCCAACTATCAATATTTCACTAGAAATTGAATTTGACAATGGTACAATTGATTTTTTTTCTCTTTTTAGGGAGAAGTACTTTTGAGTTTTGTTTAAGTACTCTCAAACATTGGCTTTCAATTTTCGAGAGTGATACAAATGAGTTGTTCATATTTTTTTTATAAAATTATTTATTAGCTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

mRNA sequence

ATGACCCACATGCTTCCATCCCCAACTCAGCTTTCGGATAAGAACCTCAAAAACTTTCCCTTCCACAGTTCCACAACACAACAAAACCCATCTCTTCTCTCTCAATTTCAAATCCCAAAAGAAACCCTAAAAACACATACAAGGAAGAAGGTAAAACAGAGAGAAATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTTGAAAAGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCAAAAATGCCAACAATTCAGCTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

Coding sequence (CDS)

ATGACCCACATGCTTCCATCCCCAACTCAGCTTTCGGATAAGAACCTCAAAAACTTTCCCTTCCACAGTTCCACAACACAACAAAACCCATCTCTTCTCTCTCAATTTCAAATCCCAAAAGAAACCCTAAAAACACATACAAGGAAGAAGGTAAAACAGAGAGAAATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTTGAAAAGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCAAAAATGCCAACAATTCAGCTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

Protein sequence

MTHMLPSPTQLSDKNLKNFPFHSSTTQQNPSLLSQFQIPKETLKTHTRKKVKQREMSVLGASSSQILYRQLHQHQILSNGKRCFLNTDFGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS

Homology

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BLAST of CmUC04G069830.1 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 170/182 (93.41%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQHQILSNGKRCFLNTDFGVLGDLRRRELRIKAEAGFWPDLSRP 115
           MSVLGA+SSQILYRQLHQHQILS GKRCFLNTDFG+LGD RRRELRIKAEAGFWPDLSRP
Sbjct: 1   MSVLGANSSQILYRQLHQHQILSTGKRCFLNTDFGLLGDQRRRELRIKAEAGFWPDLSRP 60

Query: 116 EAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYVT 175
            AVEMESIDDSDHLDRILIH+QQLSQPILIDW    MATWCRKCIYLKPKLEKLAADYVT
Sbjct: 61  AAVEMESIDDSDHLDRILIHSQQLSQPILIDW----MATWCRKCIYLKPKLEKLAADYVT 120

Query: 176 KVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHKF 235
           KVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI KF
Sbjct: 121 KVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF 178

Query: 236 VS 238
           VS
Sbjct: 181 VS 178

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BLAST of CmUC04G069830.1 vs. NCBI nr
Match: XP_008442136.1 (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.8e-83
Identity = 164/183 (89.62%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 115
           M VLGASSS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAEAGFWPDLSR
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDF---GDHRRRELRIKAEAGFWPDLSR 60

Query: 116 PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYV 175
           P +VEMESIDDSD LDRILIHAQQLSQPILIDW    MATWCRKCIYLKPKLEKLAADYV
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQQLSQPILIDW----MATWCRKCIYLKPKLEKLAADYV 120

Query: 176 TKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHK 235
           TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI K
Sbjct: 121 TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQK 176

Query: 236 FVS 238
           F S
Sbjct: 181 FAS 176

[Close]

BLAST of CmUC04G069830.1 vs. NCBI nr
Match: XP_004146393.3 (thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hypothetical protein Csa_012348 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-79
Identity = 157/183 (85.79%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 115
           MSVLGAS+S ILY  LHQH  L+N KRC FL+TDF   GD RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDF---GDHRRRELRIKAEAGFWPDLSR 60

Query: 116 PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYV 175
           P +VEMESIDDSD LDRILIHAQ LSQPILIDW    MATWCRKCIYLKPKLEKLAADYV
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQHLSQPILIDW----MATWCRKCIYLKPKLEKLAADYV 120

Query: 176 TKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHK 235
           TK KFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI K
Sbjct: 121 TKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQK 176

Query: 236 FVS 238
           F S
Sbjct: 181 FAS 176

[Close]

BLAST of CmUC04G069830.1 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 4.0e-74
Identity = 148/193 (76.68%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLH--QHQILSNG-KRCFLNTDFGVL------GD---LRRRELRIK 115
           MSVL AS++QILY ++H  QHQI SNG +RCF+N DFG +      G+   LRRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 116 AEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLK 175
            EAGFWPDLSRP  VEMESI+DS+ LDRIL HAQ+LSQP+LIDW    MATWCRKCIYLK
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDW----MATWCRKCIYLK 120

Query: 176 PKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWL 235
           PKLEKL ADY+TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWL
Sbjct: 121 PKLEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWL 180

Query: 236 VIEEVREMIHKFV 237
           VIEEVREMIHKF+
Sbjct: 181 VIEEVREMIHKFI 189

[Close]

BLAST of CmUC04G069830.1 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.5 bits (737), Expect = 5.2e-74
Identity = 148/193 (76.68%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLH--QHQILSN-GKRCFLNTDFGVL------GD---LRRRELRIK 115
           MSVL A+++QILY ++H  QHQI SN G+RCF+N DFG +      G+   LRRREL++ 
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 116 AEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLK 175
            EAGFWPDLSRP  VEMESI+DS+ LDRIL HAQ+LSQP+LIDW    MATWCRKCIYLK
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDW----MATWCRKCIYLK 120

Query: 176 PKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWL 235
           PKLEKLAADY+TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWL
Sbjct: 121 PKLEKLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWL 180

Query: 236 VIEEVREMIHKFV 237
           VIEEVREMIHKF+
Sbjct: 181 VIEEVREMIHKFI 189

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 5.0e-51
Identity = 109/208 (52.40%), Postives = 145/208 (69.71%), Query Frame = 0


Query: 43  LKTHTRKKVKQREMSVLGASSSQILYRQLH--------QHQILSNGKRC------FLNTD 102
           + + T+  +K +++    AS+ Q+L RQ H        + + L+  K+C      + N  
Sbjct: 12  ISSSTKNLLKAKKIMAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEK 71

Query: 103 FGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWF 162
            G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+W 
Sbjct: 72  LG--RSHMEKEWRLKA---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEW- 131

Query: 163 VEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKD 222
              MA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ+LVKRG+ISKMPTIQLWK+
Sbjct: 132 ---MASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKE 191

Query: 223 GEMKAEVIGGHKAWLVIEEVREMIHKFV 237
            EMK EVIGGHK WLVIEEVRE+I+KFV
Sbjct: 192 DEMKEEVIGGHKGWLVIEEVRELINKFV 210

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 9.4e-42
Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 0


Query: 93  GDLRRREL---RIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFV 152
           G  RRRE     ++AEA FW D+S+P  VEME ID  + LD  L  + +  QPI+IDW  
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDW-- 114

Query: 153 EKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDG 212
             MA+WCRKCIYLKP+LEK+A ++   V+FY+VDVNKVPQ++VKRG+I+KMPTIQLWKDG
Sbjct: 115 --MASWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDG 174

Query: 213 EMKAEVIGGHKAWLVIEEVREMIHK 235
           E  AEVIGGHKAWLV++EVREMI K
Sbjct: 175 EWAAEVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-34
Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 87  TDFGVLGDLRRRELRIKAEAGFWPDL-SRPEAVEMESIDDSDHLDRILIHAQQLSQPILI 146
           TD   L   R R + I+ + G   +L   P +VE+  I    H D+++  AQ+L + ++I
Sbjct: 44  TDKICLAAERIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVI 103

Query: 147 DWFVEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQL 206
            W    MA WCRKCIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQL
Sbjct: 104 VW----MAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQL 163

Query: 207 WKDGEMKAEVIGGHKAWLVIEEVREMI 233
           W+DG+ +AEVIGGHKA  V+ EVREMI
Sbjct: 164 WRDGQKQAEVIGGHKAHFVVNEVREMI 186

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.9e-08
Identity = 35/117 (29.91%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 116 EAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYVT 175
           EAV    + +    D ++I ++    P+L+D++    A WC  C  + P +++LA +Y  
Sbjct: 64  EAVNEVQVVNDSSWDELVIGSE---TPVLVDFW----APWCGPCRMIAPIIDELAKEYAG 123

Query: 176 KVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 233
           K+K Y ++ ++ P +  K G I  +PT+  +K+GE K  VIG      + E+V + I
Sbjct: 124 KIKCYKLNTDESPNTATKYG-IRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 31/101 (30.69%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 117 AVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYVTK 176
           AVE+ ++ DS+   ++L    +   P+L++++    A WC  C  + P +++LA D+  K
Sbjct: 85  AVEVPNLSDSEWQTKVL----ESDVPVLVEFW----APWCGPCRMIHPIVDQLAKDFAGK 144

Query: 177 VKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIG 218
            KFY ++ ++ P +   R  I  +PT+ ++K GE K  +IG
Sbjct: 145 FKFYKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIG 176

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 164/183 (89.62%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 115
           M VLGASSS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAEAGFWPDLSR
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDF---GDHRRRELRIKAEAGFWPDLSR 60

Query: 116 PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYV 175
           P +VEMESIDDSD LDRILIHAQQLSQPILIDW    MATWCRKCIYLKPKLEKLAADYV
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQQLSQPILIDW----MATWCRKCIYLKPKLEKLAADYV 120

Query: 176 TKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHK 235
           TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI K
Sbjct: 121 TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQK 176

Query: 236 FVS 238
           F S
Sbjct: 181 FAS 176

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL
Match: A0A0A0KZ53 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.9e-80
Identity = 157/183 (85.79%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 115
           MSVLGAS+S ILY  LHQH  L+N KRC FL+TDF   GD RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDF---GDHRRRELRIKAEAGFWPDLSR 60

Query: 116 PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYV 175
           P +VEMESIDDSD LDRILIHAQ LSQPILIDW    MATWCRKCIYLKPKLEKLAADYV
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQHLSQPILIDW----MATWCRKCIYLKPKLEKLAADYV 120

Query: 176 TKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHK 235
           TK KFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI K
Sbjct: 121 TKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQK 176

Query: 236 FVS 238
           F S
Sbjct: 181 FAS 176

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74
Identity = 148/193 (76.68%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLH--QHQILSNG-KRCFLNTDFGVL------GD---LRRRELRIK 115
           MSVL AS++QILY ++H  QHQI SNG +RCF+N DFG +      G+   LRRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 116 AEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLK 175
            EAGFWPDLSRP  VEMESI+DS+ LDRIL HAQ+LSQP+LIDW    MATWCRKCIYLK
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDW----MATWCRKCIYLK 120

Query: 176 PKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWL 235
           PKLEKL ADY+TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWL
Sbjct: 121 PKLEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWL 180

Query: 236 VIEEVREMIHKFV 237
           VIEEVREMIHKF+
Sbjct: 181 VIEEVREMIHKFI 189

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.3e-74
Identity = 148/193 (76.68%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLH--QHQILSN-GKRCFLNTDFGVL------GD---LRRRELRIK 115
           MSVL A+++QILY + H  QHQI SN G+RCF+N DFG +      G+   LRRREL++ 
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 116 AEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLK 175
            EAGFWPDLSRP  VEMESI+DS+ LDRIL HAQ+LSQP+LIDW    MATWCRKCIYLK
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDW----MATWCRKCIYLK 120

Query: 176 PKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWL 235
           PKLEKLAADY+TKVKFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWL
Sbjct: 121 PKLEKLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWL 180

Query: 236 VIEEVREMIHKFV 237
           VIEEVREMIHKF+
Sbjct: 181 VIEEVREMIHKFI 189

[Close]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL
Match: A0A6J1E1K1 (thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025584 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.2e-65
Identity = 142/193 (73.58%), Postives = 155/193 (80.31%), Query Frame = 0


Query: 56  MSVLGASSSQILYRQLHQ---HQILS--NGKRCFLNTDFGV------LGDLRRRELRIKA 115
           MS+L A+SSQI+YR++H     QI S  +G  CF+NT+ G       + D RRRELR  A
Sbjct: 1   MSIL-AASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQD-RRRELR--A 60

Query: 116 EAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKP 175
           EAGFWPDLSRP A EM  I DSDHLDRIL+ A+  SQP+LIDW    MATWCRKCIYLKP
Sbjct: 61  EAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDW----MATWCRKCIYLKP 120

Query: 176 KLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIGGHKAWLV 235
           KLEKLAADYV K KFYYVDVNKVPQSLVKRG+ISKMPTIQLWKDGEMKAEVIGGHKAWLV
Sbjct: 121 KLEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLV 180

Query: 236 IEEVREMIHKFVS 238
           IEEVREMI KFVS
Sbjct: 181 IEEVREMIQKFVS 185

[Close]

BLAST of CmUC04G069830.1 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 202.6 bits (514), Expect = 3.5e-52
Identity = 109/208 (52.40%), Postives = 145/208 (69.71%), Query Frame = 0


Query: 43  LKTHTRKKVKQREMSVLGASSSQILYRQLH--------QHQILSNGKRC------FLNTD 102
           + + T+  +K +++    AS+ Q+L RQ H        + + L+  K+C      + N  
Sbjct: 12  ISSSTKNLLKAKKIMAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEK 71

Query: 103 FGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWF 162
            G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+W 
Sbjct: 72  LG--RSHMEKEWRLKA---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEW- 131

Query: 163 VEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKD 222
              MA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ+LVKRG+ISKMPTIQLWK+
Sbjct: 132 ---MASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKE 191

Query: 223 GEMKAEVIGGHKAWLVIEEVREMIHKFV 237
            EMK EVIGGHK WLVIEEVRE+I+KFV
Sbjct: 192 DEMKEEVIGGHKGWLVIEEVRELINKFV 210

[Close]

BLAST of CmUC04G069830.1 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 87  TDFGVLGDLRRRELRIKAEAGFWPDL-SRPEAVEMESIDDSDHLDRILIHAQQLSQPILI 146
           TD   L   R R + I+ + G   +L   P +VE+  I    H D+++  AQ+L + ++I
Sbjct: 44  TDKICLAAERIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVI 103

Query: 147 DWFVEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQL 206
            W    MA WCRKCIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQL
Sbjct: 104 VW----MAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQL 163

Query: 207 WKDGEMKAEVIGGHKAWLVIEEVREMI 233
           W+DG+ +AEVIGGHKA  V+ EVREMI
Sbjct: 164 WRDGQKQAEVIGGHKAHFVVNEVREMI 186

[Close]

BLAST of CmUC04G069830.1 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 43  LKTHTRKKVKQREMSVLGASSSQILYRQLH--------QHQILSNGKRC------FLNTD 102
           + + T+  +K +++    AS+ Q+L RQ H        + + L+  K+C      + N  
Sbjct: 12  ISSSTKNLLKAKKIMAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEK 71

Query: 103 FGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWF 162
            G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+W 
Sbjct: 72  LG--RSHMEKEWRLKA---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEW- 131

Query: 163 VEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSIS 199
              MA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ+LVKRG+IS
Sbjct: 132 ---MASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNIS 172

[Close]

BLAST of CmUC04G069830.1 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09
Identity = 31/101 (30.69%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 117 AVEMESIDDSDHLDRILIHAQQLSQPILIDWFVEKMATWCRKCIYLKPKLEKLAADYVTK 176
           AVE+ ++ DS+   ++L    +   P+L++++    A WC  C  + P +++LA D+  K
Sbjct: 85  AVEVPNLSDSEWQTKVL----ESDVPVLVEFW----APWCGPCRMIHPIVDQLAKDFAGK 144

Query: 177 VKFYYVDVNKVPQSLVKRGSISKMPTIQLWKDGEMKAEVIG 218
            KFY ++ ++ P +   R  I  +PT+ ++K GE K  +IG
Sbjct: 145 FKFYKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIG 176

[Close]

BLAST of CmUC04G069830.1 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 149 VEKMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISKMPTIQLWKD 208
           +E  A WC  C  L+PKLE+LAA Y T V+F  +DV+ V  S+    ++S +P I   K 
Sbjct: 64  IEFTAKWCGPCKTLEPKLEELAAKY-TDVEFVKIDVD-VLMSVWMEFNLSTLPAIVFMKR 123

Query: 209 GEMKAEVIGGHKAWLVIEEVREMIHKF 236
           G     V+G     + ++E+   ++K+
Sbjct: 124 GREVDMVVG-----VKVDELERKLNKY 143

The following BLAST results are available for this feature:

BLAST of CmUC04G069830.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883417.1	1.4e-90	93.41	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008442136.1	2.8e-83	89.62	PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo]	[more]
XP_004146393.3	1.4e-79	85.79	thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hyp...	[more]
XP_022966464.1	4.0e-74	76.68	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]
KAG6595600.1	5.2e-74	76.68	Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of CmUC04G069830.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	5.0e-51	52.40	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	9.4e-42	62.76	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	5.5e-34	51.02	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
P48384	8.9e-08	29.91	Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9SEU6	1.2e-07	30.69	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]

BLAST of CmUC04G069830.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B504	1.3e-83	89.62	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]
A0A0A0KZ53	6.9e-80	85.79	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780...	[more]
A0A6J1HTV8	1.9e-74	76.68	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A6J1EDU4	4.3e-74	76.68	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]
A0A6J1E1K1	2.2e-65	73.58	thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110255...	[more]

BLAST of CmUC04G069830.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	3.5e-52	52.40	WCRKC thioredoxin 1	[more]
AT5G04260.1	3.9e-35	51.02	WCRKC thioredoxin 2	[more]
AT5G06690.2	4.0e-32	45.29	WCRKC thioredoxin 1	[more]
AT3G15360.1	8.2e-09	30.69	thioredoxin M-type 4	[more]
AT1G69880.1	4.2e-05	34.48	thioredoxin H-type 8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 146..221 e-value: 4.9E-14 score: 52.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 103..237 score: 9.589685
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 113..236 e-value: 7.9E-18 score: 66.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 56..236
None	No IPR available	CDD	cd02947	TRX_family	coord: 140..232 e-value: 3.72466E-18 score: 74.5168
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 56..236
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 126..232

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC04G069830	CmUC04G069830	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6454523..6454624	exon
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6455791..6455808	exon
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6456762..6456828	exon
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6457691..6457765	exon
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6458023..6458030	exon
CmUC04G069830.1-exon	CmUC04G069830.1-exon-CmU531Chr04:6458414..6458857	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6454523..6454624	CDS
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6455791..6455808	CDS
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6456762..6456828	CDS
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6457691..6457765	CDS
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6458023..6458030	CDS
CmUC04G069830.1-cds	CmUC04G069830.1-cds-CmU531Chr04:6458414..6458857	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC04G069830.1	CmUC04G069830.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma