Clc10G22010.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc10G22010.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat superfamily protein
Location	ClcChr10: 35081632 .. 35084354 (+)
Sequence length	2723
RNA-Seq Expression	Clc10G22010.1
Synteny	Clc10G22010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGCATCCTTTTTAACTATGATAAATAAATGAAATAACATCTTTGTAAAATAATAATAATAATAAAGTTAATTATTTTAAATGACAAAACTGTCGAAATTATTTACCAATAATAGTAAACTGTCTATTGTGATATTTATAAATATTTTAGTTCATTTTTTTTATATTTAAAAACAATCCTAATAATAATAACACATGCTTTTAGTCTTTTATTACGAATTAGAGAATCATAAGAAAACATTATATATATATATAAACTAATTTCCATTCAAATTAAAGCTTAAGCTTTGTGTTGCGCTCTAGAGAATTGAGAGTTGTTTATGCTCTTGATCCTGTGTACGGGTTTTCTTAAAAAAAATAATATTAAAAATAAAATTTTAAAAAAACTATGGTGCTTTGATGTTTTGGAGATTGCCAAAGAGTAAGGGATTTAAGATTTTAAATTTAAATTAGTAGGACTTCTGTAGCTGTAAGATTCATTCGAGCGACACGGTTCTTGATGACCAGTCTCACCAATCCATCTTCTCCCGTCTTCTCCAAGGCATTAGCGATCAAGAATTACCTCACCAATGGGGTCAACTGCTTCAAGCAGCTTAAGCATATCCATGGCCGCCTTCTCCGCCTCCACCTCGACCAAGACAACTACCTTCTCAACATGATTCTCTGTTGCGGCTTAGATTTTGGTTGCGCAAATTACACTAGACTCGTATTTGCTCAAGCCAAAGAGCCCAACATTTTCCTCTGGAATACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGATGAGGCTATCGACGTTTATGGGTCCATGCGTGGAGAGGGATTTTTACCCAATAATTTCACTTTCCCTTTCGTTTTGAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGATTGAAGATTCACACCCTCGTGGTGAAAGCAGGTTTTGATAATGATGTGTTTGTGAAGACCAGCTTGGTTTCTCTGTATGTTAAGTGTGATAATTTTGACAATGCACTCAAGGTGTTCGATGATATTCCTGACAAAAATGTGGTCTCTTGGACTGCTATAATCACTGGATATATAGGCTCTGGTCAATTTAGAGAAGCTATTGATGCATTTAAAAAGCTACTTGAAATGGGTTTAAAGCCTGATAGCTTCTCTCTTGTCAAAGTCCTGTCTGCCTGTGCTCAGCTTGGGGATTTCACAAGTGGCGAGTGGATTGATAGATATATAAGTGATAGTGGTATGGGAAGGAATGTTTTTGTGGCTACTTCTTTGTTGGATATGTATGTCAAATGTGGAAACATGGAGCGAGCAAATCTTATCTTTAATGCCATGTCAGAGAAAGATATTGTTTCTTGGAGTACCATGATTCAGGGCTATGCATTCAATAGCTTGCCTAAACAAGCGCTAGATCTTTTCTTTCAAATGCAATCTGAGAATTTGAAGCCTGATTGTTATGCGATGGTTGGTGTTCTCTCTGCTTGTGCAAAATTAGGAGCTTTAGATTTAGGCATTTGGGCCAGCGGCCTGATGGATAGACATGAGTTCTTGTTGAATCCTGTCCTCGGTACAGCTTTAATTGATATGTACTCCAAATGTGGTAGCGTCGCTCGAGCTTGGGAAATCTTCAAAGCGATGGAAAAGAAAGACCGTGTAGTTTGGAATGCGATGATAGTTGGACTTTCTATGAACGGGCATGCCAAAGCTGTATTTTCATTGTTTAGTCTTGTGGAGAAACATGGAATTCAGCCTGATGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCAATGAGGGTCGTCAATATTTCAATAACATGAAGTGGGTATTCTCATTAACCCCTTCGATCGAGCATTACGGATGTATGGTGGATTTGCTTGGGCGTGCGGGGTTATTAGATGAGGCTCATCAGTTGATAAACGACATGCCAATGAAGCCTAATGCTGTTGTTTGGGGTGCATTGTTGGGTGGATGTAGATTGCATAAAAATACCCACTTGGCTGAGCATGTACTGAAAAAGCTTATTGAATTAGAGCCATGGAACTCAGGAAACTATGTTCTGTTATCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCCGAGAAGATACGGTCAGCGATGAAGCAGCATCGGATTCAGAAGATCCGTGGCTACAGTTGGATTGAGATCGATGGAATTGTTCATGAGTTTTTGGTAGGAGATAAATCACACTCGTTATCGGAGAAAATATATGCAAAACTTGATGAATTGGGTAGAGAATTGAAAGCAGCTGGTCATGTACCAACTACAGAGTTTGTTCTTTTTGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTAGCTGTGGCTTTTGGTTTGATAAGCTCTCCTCCTAATCATGTTATTCGTGTTGTTAAAAATCTTCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTCATTTCTAAGATCACTAAAAGAGAGATTATCATAAGGGATACTAATCGGTTCCATACATTTATTGATGGTTCTTGTTCTTGTAAAGATTATTGGTGAAATTTGTCATTCTTAATTAATCCATATGCAATTTTGTAGTGTTTGGATGAGTTATTTTTGTCAAAGTAACCATAGTTCAGCAGTAATTATCATGCATTATCTCCCTTGAATCAATGGTTCAAATTTCCCACACCACTATTGTTGTACTCAAAAAAA

mRNA sequence

TTTCGCATCCTTTTTAACTATGATAAATAAATGAAATAACATCTTTGTAAAATAATAATAATAATAAAGTTAATTATTTTAAATGACAAAACTGTCGAAATTATTTACCAATAATAGTAAACTGTCTATTGTGATATTTATAAATATTTTAGTTCATTTTTTTTATATTTAAAAACAATCCTAATAATAATAACACATGCTTTTAGTCTTTTATTACGAATTAGAGAATCATAAGAAAACATTATATATATATATAAACTAATTTCCATTCAAATTAAAGCTTAAGCTTTGTGTTGCGCTCTAGAGAATTGAGAGTTGTTTATGCTCTTGATCCTGTGTACGGGTTTTCTTAAAAAAAATAATATTAAAAATAAAATTTTAAAAAAACTATGGTGCTTTGATGTTTTGGAGATTGCCAAAGAGTAAGGGATTTAAGATTTTAAATTTAAATTAGTAGGACTTCTGTAGCTGTAAGATTCATTCGAGCGACACGGTTCTTGATGACCAGTCTCACCAATCCATCTTCTCCCGTCTTCTCCAAGGCATTAGCGATCAAGAATTACCTCACCAATGGGGTCAACTGCTTCAAGCAGCTTAAGCATATCCATGGCCGCCTTCTCCGCCTCCACCTCGACCAAGACAACTACCTTCTCAACATGATTCTCTGTTGCGGCTTAGATTTTGGTTGCGCAAATTACACTAGACTCGTATTTGCTCAAGCCAAAGAGCCCAACATTTTCCTCTGGAATACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGATGAGGCTATCGACGTTTATGGGTCCATGCGTGGAGAGGGATTTTTACCCAATAATTTCACTTTCCCTTTCGTTTTGAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGATTGAAGATTCACACCCTCGTGGTGAAAGCAGGTTTTGATAATGATGTGTTTGTGAAGACCAGCTTGGTTTCTCTGTATGTTAAGTGTGATAATTTTGACAATGCACTCAAGGTGTTCGATGATATTCCTGACAAAAATGTGGTCTCTTGGACTGCTATAATCACTGGATATATAGGCTCTGGTCAATTTAGAGAAGCTATTGATGCATTTAAAAAGCTACTTGAAATGGGTTTAAAGCCTGATAGCTTCTCTCTTGTCAAAGTCCTGTCTGCCTGTGCTCAGCTTGGGGATTTCACAAGTGGCGAGTGGATTGATAGATATATAAGTGATAGTGGTATGGGAAGGAATGTTTTTGTGGCTACTTCTTTGTTGGATATGTATGTCAAATGTGGAAACATGGAGCGAGCAAATCTTATCTTTAATGCCATGTCAGAGAAAGATATTGTTTCTTGGAGTACCATGATTCAGGGCTATGCATTCAATAGCTTGCCTAAACAAGCGCTAGATCTTTTCTTTCAAATGCAATCTGAGAATTTGAAGCCTGATTGTTATGCGATGGTTGGTGTTCTCTCTGCTTGTGCAAAATTAGGAGCTTTAGATTTAGGCATTTGGGCCAGCGGCCTGATGGATAGACATGAGTTCTTGTTGAATCCTGTCCTCGGTACAGCTTTAATTGATATGTACTCCAAATGTGGTAGCGTCGCTCGAGCTTGGGAAATCTTCAAAGCGATGGAAAAGAAAGACCGTGTAGTTTGGAATGCGATGATAGTTGGACTTTCTATGAACGGGCATGCCAAAGCTGTATTTTCATTGTTTAGTCTTGTGGAGAAACATGGAATTCAGCCTGATGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCAATGAGGGTCGTCAATATTTCAATAACATGAAGTGGGTATTCTCATTAACCCCTTCGATCGAGCATTACGGATGTATGGTGGATTTGCTTGGGCGTGCGGGGTTATTAGATGAGGCTCATCAGTTGATAAACGACATGCCAATGAAGCCTAATGCTGTTGTTTGGGGTGCATTGTTGGGTGGATGTAGATTGCATAAAAATACCCACTTGGCTGAGCATGTACTGAAAAAGCTTATTGAATTAGAGCCATGGAACTCAGGAAACTATGTTCTGTTATCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCCGAGAAGATACGGTCAGCGATGAAGCAGCATCGGATTCAGAAGATCCGTGGCTACAGTTGGATTGAGATCGATGGAATTGTTCATGAGTTTTTGGTAGGAGATAAATCACACTCGTTATCGGAGAAAATATATGCAAAACTTGATGAATTGGGTAGAGAATTGAAAGCAGCTGGTCATGTACCAACTACAGAGTTTGTTCTTTTTGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTAGCTGTGGCTTTTGGTTTGATAAGCTCTCCTCCTAATCATGTTATTCGTGTTGTTAAAAATCTTCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTCATTTCTAAGATCACTAAAAGAGAGATTATCATAAGGGATACTAATCGGTTCCATACATTTATTGATGGTTCTTGTTCTTGTAAAGATTATTGGTGAAATTTGTCATTCTTAATTAATCCATATGCAATTTTGTAGTGTTTGGATGAGTTATTTTTGTCAAAGTAACCATAGTTCAGCAGTAATTATCATGCATTATCTCCCTTGAATCAATGGTTCAAATTTCCCACACCACTATTGTTGTACTCAAAAAAA

Coding sequence (CDS)

ATGACCAGTCTCACCAATCCATCTTCTCCCGTCTTCTCCAAGGCATTAGCGATCAAGAATTACCTCACCAATGGGGTCAACTGCTTCAAGCAGCTTAAGCATATCCATGGCCGCCTTCTCCGCCTCCACCTCGACCAAGACAACTACCTTCTCAACATGATTCTCTGTTGCGGCTTAGATTTTGGTTGCGCAAATTACACTAGACTCGTATTTGCTCAAGCCAAAGAGCCCAACATTTTCCTCTGGAATACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGATGAGGCTATCGACGTTTATGGGTCCATGCGTGGAGAGGGATTTTTACCCAATAATTTCACTTTCCCTTTCGTTTTGAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGATTGAAGATTCACACCCTCGTGGTGAAAGCAGGTTTTGATAATGATGTGTTTGTGAAGACCAGCTTGGTTTCTCTGTATGTTAAGTGTGATAATTTTGACAATGCACTCAAGGTGTTCGATGATATTCCTGACAAAAATGTGGTCTCTTGGACTGCTATAATCACTGGATATATAGGCTCTGGTCAATTTAGAGAAGCTATTGATGCATTTAAAAAGCTACTTGAAATGGGTTTAAAGCCTGATAGCTTCTCTCTTGTCAAAGTCCTGTCTGCCTGTGCTCAGCTTGGGGATTTCACAAGTGGCGAGTGGATTGATAGATATATAAGTGATAGTGGTATGGGAAGGAATGTTTTTGTGGCTACTTCTTTGTTGGATATGTATGTCAAATGTGGAAACATGGAGCGAGCAAATCTTATCTTTAATGCCATGTCAGAGAAAGATATTGTTTCTTGGAGTACCATGATTCAGGGCTATGCATTCAATAGCTTGCCTAAACAAGCGCTAGATCTTTTCTTTCAAATGCAATCTGAGAATTTGAAGCCTGATTGTTATGCGATGGTTGGTGTTCTCTCTGCTTGTGCAAAATTAGGAGCTTTAGATTTAGGCATTTGGGCCAGCGGCCTGATGGATAGACATGAGTTCTTGTTGAATCCTGTCCTCGGTACAGCTTTAATTGATATGTACTCCAAATGTGGTAGCGTCGCTCGAGCTTGGGAAATCTTCAAAGCGATGGAAAAGAAAGACCGTGTAGTTTGGAATGCGATGATAGTTGGACTTTCTATGAACGGGCATGCCAAAGCTGTATTTTCATTGTTTAGTCTTGTGGAGAAACATGGAATTCAGCCTGATGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCAATGAGGGTCGTCAATATTTCAATAACATGAAGTGGGTATTCTCATTAACCCCTTCGATCGAGCATTACGGATGTATGGTGGATTTGCTTGGGCGTGCGGGGTTATTAGATGAGGCTCATCAGTTGATAAACGACATGCCAATGAAGCCTAATGCTGTTGTTTGGGGTGCATTGTTGGGTGGATGTAGATTGCATAAAAATACCCACTTGGCTGAGCATGTACTGAAAAAGCTTATTGAATTAGAGCCATGGAACTCAGGAAACTATGTTCTGTTATCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCCGAGAAGATACGGTCAGCGATGAAGCAGCATCGGATTCAGAAGATCCGTGGCTACAGTTGGATTGAGATCGATGGAATTGTTCATGAGTTTTTGGTAGGAGATAAATCACACTCGTTATCGGAGAAAATATATGCAAAACTTGATGAATTGGGTAGAGAATTGAAAGCAGCTGGTCATGTACCAACTACAGAGTTTGTTCTTTTTGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTAGCTGTGGCTTTTGGTTTGATAAGCTCTCCTCCTAATCATGTTATTCGTGTTGTTAAAAATCTTCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTCATTTCTAAGATCACTAAAAGAGAGATTATCATAAGGGATACTAATCGGTTCCATACATTTATTGATGGTTCTTGTTCTTGTAAAGATTATTGGTGA

Protein sequence

MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLDFGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNVVSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQALDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKDYW

Homology

[Close]

BLAST of Clc10G22010.1 vs. NCBI nr
Match: XP_038905109.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Benincasa hispida])

HSP 1 Score: 1326.6 bits (3432), Expect = 0.0e+00
Identity = 639/688 (92.88%), Postives = 655/688 (95.20%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           MT LTNPSSPVFSKAL IKNYL+NGVNCFKQLKHIHGRLLRL LDQDNYLLN ILCCGLD
Sbjct: 1   MTILTNPSSPVFSKALEIKNYLSNGVNCFKQLKHIHGRLLRLDLDQDNYLLNTILCCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
           FGC NYT+LVFAQAKEPNIFLWNTMI  LVS DCFDEAID+YGSMRG+GFLPNNFTFPF+
Sbjct: 61  FGCTNYTKLVFAQAKEPNIFLWNTMIHRLVSNDCFDEAIDLYGSMRGQGFLPNNFTFPFI 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSL+SLY KCDN DNAL VFDDIPDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLLSLYAKCDNLDNALMVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIIT YIGSGQFREAIDAFKKLLEMGLK DSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITAYIGSGQFREAIDAFKKLLEMGLKADSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISDSGM RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDSGMRRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVG+LSACAKLGALDLGIW S LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGILSACAKLGALDLGIWVSSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIFKAME KD VVWNAM+VGLSMNGHAKAVFSLF LVEKHGIQPD NTF
Sbjct: 361 YSKCGSVTRAWEIFKAMENKDHVVWNAMMVGLSMNGHAKAVFSLFGLVEKHGIQPDGNTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           +GLLCGCTHGGFV EGR+YFNNMK VFS+TPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 MGLLCGCTHGGFVKEGRRYFNNMKRVFSITPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MKPNAVVWGALLGGCRLHK+THLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCRLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRS MK+ RIQKIRG SWIEI+GIVHEFLVGDKSHSLSEKIYAKLD LGRELKAAGHVPT
Sbjct: 541 IRSTMKEQRIQKIRGCSWIEINGIVHEFLVGDKSHSLSEKIYAKLDVLGRELKAAGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPN VIRVVKNLRVCGDCH AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNQVIRVVKNLRVCGDCHGAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT+REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITQREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. NCBI nr
Match: KAG6596322.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1320.8 bits (3417), Expect = 0.0e+00
Identity = 635/688 (92.30%), Postives = 662/688 (96.22%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SPVFSKAL IKNYL NGVNCFKQLKHIH RLLRLHLDQDNYLLN +L CGLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC NYT+LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G+ RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YF +MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFYSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSP NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. NCBI nr
Match: XP_023538778.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 633/688 (92.01%), Postives = 662/688 (96.22%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SP+FSKAL IKN+L NGVNCFKQLKHIH RLLRLHLDQDNYLLN +L CGLD
Sbjct: 1   MSILTNPASPIFSKALEIKNFLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC NY++LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTNYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G  RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWASGLMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASGLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YFN+MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRSAMKEKRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSP NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. NCBI nr
Match: XP_022971519.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima] >XP_022971520.1 putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima])

HSP 1 Score: 1316.6 bits (3406), Expect = 0.0e+00
Identity = 632/688 (91.86%), Postives = 660/688 (95.93%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SPVFSKAL IKNYL NGVNCFKQLKHIH RLLRLH DQDNYLLN +L CGLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC NYT+LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G+ RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWAS LMD+HEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YFN+MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEI GIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSP NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. NCBI nr
Match: XP_022951275.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moschata] >XP_022951285.1 putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moschata])

HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 631/688 (91.72%), Postives = 659/688 (95.78%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SPVFSKAL IKNYL NGVNCFKQLKHIH RLLRLHLDQDNYLLN +L  GLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC +Y++LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G  RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLV KHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YFN+MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS  NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 687

[Close]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 1.2e-238
Identity = 393/689 (57.04%), Postives = 514/689 (74.60%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNC-FKQLKHIHGRLLRLHLDQDNYLLNMILCCGL 60
           M+ +T PS+   SK   IK  ++  V C    LK IH  L+  HL  D +L+N++L   L
Sbjct: 1   MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60

Query: 61  DFGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPF 120
            F    Y+ L+F+  + PNIFL+N++I G V+   F E +D++ S+R  G   + FTFP 
Sbjct: 61  FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120

Query: 121 VLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKN 180
           VLKAC R    +LG+ +H+LVVK GF++DV   TSL+S+Y      ++A K+FD+IPD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180

Query: 181 VVSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDR 240
           VV+WTA+ +GY  SG+ REAID FKK++EMG+KPDS+ +V+VLSAC  +GD  SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240

Query: 241 YISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQ 300
           Y+ +  M +N FV T+L+++Y KCG ME+A  +F++M EKDIV+WSTMIQGYA NS PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300

Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALID 360
            ++LF QM  ENLKPD +++VG LS+CA LGALDLG W   L+DRHEFL N  +  ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360

Query: 361 MYSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENT 420
           MY+KCG++AR +E+FK M++KD V+ NA I GL+ NGH K  F++F   EK GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420

Query: 421 FIGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDM 480
           F+GLLCGC H G + +G ++FN +  V++L  ++EHYGCMVDL GRAG+LD+A++LI DM
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480

Query: 481 PMKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
           PM+PNA+VWGALL GCRL K+T LAE VLK+LI LEPWN+GNYV LSNIYS   RW+EA 
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540

Query: 541 KIRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVP 600
           ++R  M +  ++KI GYSWIE++G VHEFL  DKSH LS+KIYAKL++LG E++  G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600

Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLIS 660
           TTEFV FD+EEEEKE  LG HSEKLAVA GLIS+    VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660

Query: 661 KITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           KIT+REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685

[Close]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 1.4e-170
Identity = 312/725 (43.03%), Postives = 443/725 (61.10%), Query Frame = 0


Query: 4   LTNPSSPVFSKALAIKNY----LTNGVNCFKQLKHIHGRLLRLHLDQDNYLLN-MILCCG 63
           L + S P +    +I+N+    L +     + L+ IH +++++ L   NY L+ +I  C 
Sbjct: 20  LPSSSDPPYD---SIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 79

Query: 64  LD--FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFT 123
           L   F    Y   VF   +EPN+ +WNTM RG         A+ +Y  M   G LPN++T
Sbjct: 80  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 139

Query: 124 FPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDN------------ 183
           FPFVLK+CA+    + G +IH  V+K G D D++V TSL+S+YV+               
Sbjct: 140 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 199

Query: 184 -------------------FDNALKVFDDIPDKNVVSWTAIITGYIGSGQFREAIDAFKK 243
                               +NA K+FD+IP K+VVSW A+I+GY  +G ++EA++ FK 
Sbjct: 200 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 259

Query: 244 LLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 303
           +++  ++PD  ++V V+SACAQ G    G  +  +I D G G N+ +  +L+D+Y KCG 
Sbjct: 260 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 319

Query: 304 MERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQALDLFFQMQSENLKPDCYAMVGVLSA 363
           +E A  +F  +  KD++SW+T+I GY   +L K+AL LF +M      P+   M+ +L A
Sbjct: 320 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 379

Query: 364 CAKLGALDLGIWASGLMD-RHEFLLN-PVLGTALIDMYSKCGSVARAWEIFKAMEKKDRV 423
           CA LGA+D+G W    +D R + + N   L T+LIDMY+KCG +  A ++F ++  K   
Sbjct: 380 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 439

Query: 424 VWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNM 483
            WNAMI G +M+G A A F LFS + K GIQPD+ TF+GLL  C+H G ++ GR  F  M
Sbjct: 440 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 499

Query: 484 KWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHL 543
              + +TP +EHYGCM+DLLG +GL  EA ++IN M M+P+ V+W +LL  C++H N  L
Sbjct: 500 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 559

Query: 544 AEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDG 603
            E   + LI++EP N G+YVLLSNIY+++ RW E  K R+ +    ++K+ G S IEID 
Sbjct: 560 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 619

Query: 604 IVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEK 663
           +VHEF++GDK H  + +IY  L+E+   L+ AG VP T  VL ++EEE KE  L  HSEK
Sbjct: 620 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 679

Query: 664 LAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCS 689
           LA+AFGLIS+ P   + +VKNLRVC +CHEA KLISKI KREII RD  RFH F DG CS
Sbjct: 680 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 739

[Close]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 9.3e-159
Identity = 288/722 (39.89%), Postives = 425/722 (58.86%), Query Frame = 0


Query: 3   SLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGL--D 62
           + +NP+ P  +   +    L       +QLK  HG ++R     D Y  + +        
Sbjct: 17  NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76

Query: 63  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEG-FLPNNFTFPF 122
           F    Y R VF +  +PN F WNT+IR   S      +I  +  M  E    PN +TFPF
Sbjct: 77  FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136

Query: 123 VLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKN 182
           ++KA A    + LG  +H + VK+   +DVFV  SL+  Y  C + D+A KVF  I +K+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196

Query: 183 VVSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDR 242
           VVSW ++I G++  G   +A++ FKK+    +K    ++V VLSACA++ +   G  +  
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256

Query: 243 YISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 302
           YI ++ +  N+ +A ++LDMY KCG++E A  +F+AM EKD V+W+TM+ GYA       
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316

Query: 303 -------------------------NSLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 362
                                    N  P +AL +F ++Q  +N+K +   +V  LSACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376

Query: 363 KLGALDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNA 422
           ++GAL+LG W    + +H   +N  + +ALI MYSKCG + ++ E+F ++EK+D  VW+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436

Query: 423 MIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVF 482
           MI GL+M+G       +F  +++  ++P+  TF  + C C+H G V+E    F+ M+  +
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496

Query: 483 SLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHV 542
            + P  +HY C+VD+LGR+G L++A + I  MP+ P+  VWGALLG C++H N +LAE  
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556

Query: 543 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHE 602
             +L+ELEP N G +VLLSNIY+   +WE   ++R  M+   ++K  G S IEIDG++HE
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616

Query: 603 FLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 662
           FL GD +H +SEK+Y KL E+  +LK+ G+ P    VL  IEEEE KE  L  HSEKLA+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676

Query: 663 AFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKD 689
            +GLIS+    VIRV+KNLRVCGDCH   KLIS++  REII+RD  RFH F +G CSC D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736

[Close]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 3.3e-156
Identity = 264/660 (40.00%), Postives = 406/660 (61.52%), Query Frame = 0


Query: 31  QLKHIHGRLLRLHLDQDNYLLNMILCCGLDFGCANYTRLVFAQAKEPNIFLWNTMIRGLV 90
           QLK IH RLL L L    +L+  ++     FG   + R VF     P IF WN +IRG  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 91  SKDCFDEAIDVYGSMRGEGFLPNNFTFPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVF 150
             + F +A+ +Y +M+     P++FTFP +LKAC+    +++G  +H  V + GFD DVF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 151 VKTSLVSLYVKCDNFDNALKVFD--DIPDKNVVSWTAIITGYIGSGQFREAIDAFKKLLE 210
           V+  L++LY KC    +A  VF+   +P++ +VSWTAI++ Y  +G+  EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 211 MGLKPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNMER 270
           M +KPD  +LV VL+A   L D   G  I   +   G+     +  SL  MY KCG +  
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQALDLFFQMQSENLKPDCYAMVGVLSACAK 330
           A ++F+ M   +++ W+ MI GYA N   ++A+D+F +M +++++PD  ++   +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 331 LGALDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNAM 390
           +G+L+        + R ++  +  + +ALIDM++KCGSV  A  +F     +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 391 IVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVFS 450
           IVG  ++G A+   SL+  +E+ G+ P++ TF+GLL  C H G V EG  +FN M     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHK 455

Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHVL 510
           + P  +HY C++DLLGRAG LD+A+++I  MP++P   VWGALL  C+ H++  L E+  
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515

Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHEF 570
           ++L  ++P N+G+YV LSN+Y+A+  W+   ++R  MK+  + K  G SW+E+ G +  F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575

Query: 571 LVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
            VGDKSH   E+I  +++ +   LK  G V   +  L D+ +EE E  L  HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635

Query: 631 GLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           GLIS+P    +R+ KNLR C +CH A KLISK+  REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.4e-149
Identity = 260/657 (39.57%), Postives = 404/657 (61.49%), Query Frame = 0


Query: 33  KHIHGRLLRLHLDQDNYLLNMILCCGLDFGCANYTRLVFAQAKEPNIFLWNTMIRGLVSK 92
           + +HG +L+    + N + N ++   L     +  R VF +  E ++  WN++I G VS 
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 93  DCFDEAIDVYGSMRGEGFLPNNFTFPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVFVK 152
              ++ + V+  M   G   +  T   V   CA    I LG  +H++ VKA F  +    
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334

Query: 153 TSLVSLYVKCDNFDNALKVFDDIPDKNVVSWTAIITGYIGSGQFREAIDAFKKLLEMGLK 212
            +L+ +Y KC + D+A  VF ++ D++VVS+T++I GY   G   EA+  F+++ E G+ 
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 213 PDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNMERANLI 272
           PD +++  VL+ CA+      G+ +  +I ++ +G ++FV+ +L+DMY KCG+M+ A L+
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 273 FNAMSEKDIVSWSTMIQGYAFNSLPKQALDLF-FQMQSENLKPDCYAMVGVLSACAKLGA 332
           F+ M  KDI+SW+T+I GY+ N    +AL LF   ++ +   PD   +  VL ACA L A
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 333 LDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNAMIVG 392
            D G    G + R+ +  +  +  +L+DMY+KCG++  A  +F  +  KD V W  MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 393 LSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVFSLTP 452
             M+G  K   +LF+ + + GI+ DE +F+ LL  C+H G V+EG ++FN M+    + P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 453 SIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHVLKKL 512
           ++EHY C+VD+L R G L +A++ I +MP+ P+A +WGALL GCR+H +  LAE V +K+
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694

Query: 513 IELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHEFLVG 572
            ELEP N+G YVL++NIY+ + +WE+ +++R  + Q  ++K  G SWIEI G V+ F+ G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 573 DKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLI 632
           D S+  +E I A L ++   +   G+ P T++ L D EE EKE  L  HSEKLA+A G+I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 633 SSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           SS    +IRV KNLRVCGDCHE  K +SK+T+REI++RD+NRFH F DG CSC+ +W
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

[Close]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL
Match: A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxima OX=3661 GN=LOC111470216 PE=3 SV=1)

HSP 1 Score: 1316.6 bits (3406), Expect = 0.0e+00
Identity = 632/688 (91.86%), Postives = 660/688 (95.93%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SPVFSKAL IKNYL NGVNCFKQLKHIH RLLRLH DQDNYLLN +L CGLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC NYT+LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G+ RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWAS LMD+HEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YFN+MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEI GIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSP NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL
Match: A0A6J1GIB8 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita moschata OX=3662 GN=LOC111454160 PE=3 SV=1)

HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 631/688 (91.72%), Postives = 659/688 (95.78%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           M+ LTNP+SPVFSKAL IKNYL NGVNCFKQLKHIH RLLRLHLDQDNYLLN +L  GLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
            GC +Y++LVF+QAKEPNIFLWNTMIRGLVSKDCFD+AIDVYGSMR EGFLPNNFTFPFV
Sbjct: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLG+KIHTLVVKAGFD DVFVKTSL+SLY KCDN +NALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFK+LLEMGL+PDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD G  RNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFN LPKQA
Sbjct: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACA+LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF++MEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLV KHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFV+EGR+YFN+MK VFSLTPSIEHYGCMVDLLGRAGLLDEAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLH+++HLAE VLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IRSAMK+ RIQKIRG SWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS  NHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 687

[Close]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL
Match: A0A5A7TLY9 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005630 PE=3 SV=1)

HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 625/688 (90.84%), Postives = 654/688 (95.06%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           MT LTNPSSPVFSKAL IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLNMILCCGLD
Sbjct: 1   MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
           FG  +YT+LVF+Q KEPNIFLWNTMIRGLVSKDCFDEAI +YGSMRG GFLPNNFTFPFV
Sbjct: 61  FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDEAIHLYGSMRGGGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLGLKIHTL+VKAG+D DVFVKTSL+SLYVKCDN D+ALKVFDDIPDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYI SG FREAI AFKKLLEMGLKPDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD+GMGRNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFN LP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF+ MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFVNEGRQ+FNNMK VFSLTPSIEHYGCMVDLLGRAGLL+EAHQLINDMP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MKPNAVVWGALLGGC+LHK+THLAE VLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IR  MK+ +IQKIR  SWIEI+GIVHEFLVGD SHSLSEKIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+SPPN VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           ITKREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL
Match: A0A5D3DMV5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00430 PE=3 SV=1)

HSP 1 Score: 1297.3 bits (3356), Expect = 0.0e+00
Identity = 623/688 (90.55%), Postives = 654/688 (95.06%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           MT LTNPSSPVFSKAL IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLNMILCCGLD
Sbjct: 1   MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
           FG  +YT+LVF+Q KEPNIFLWNTMIRGLVSKDCFD+AI +YGSMRG GFLPNNFTFPFV
Sbjct: 61  FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLGLKIHTL+VKAG+D DVFVKTSL+SLYVKCDN D+ALKVFDDIPDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYI SG FREAI AF+KLLEMGLKPDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD+GMGRNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFN LP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF+ MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFVNEGRQ+FNNMK VFSLTPSIEHYGCMVDLLGRAGLL+EAHQLINDMP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MKPNAVVWGALLGGC+LHK+THLAE VLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IR  MK+ +IQKIR  SWIEI+GIVHEFLVGD SHSLSEKIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+SPPN VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           ITKREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL
Match: A0A1S3B518 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo OX=3656 GN=LOC103486253 PE=3 SV=1)

HSP 1 Score: 1297.3 bits (3356), Expect = 0.0e+00
Identity = 623/688 (90.55%), Postives = 654/688 (95.06%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGLD 60
           MT LTNPSSPVFSKAL IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLNMILCCGLD
Sbjct: 1   MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60

Query: 61  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPFV 120
           FG  +YT+LVF+Q KEPNIFLWNTMIRGLVSKDCFD+AI +YGSMRG GFLPNNFTFPFV
Sbjct: 61  FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKNV 180
           LKACARKLDIRLGLKIHTL+VKAG+D DVFVKTSL+SLYVKCDN D+ALKVFDDIPDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYI SG FREAI AF+KLLEMGLKPDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240

Query: 241 ISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQA 300
           ISD+GMGRNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFN LP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALIDM 360
           LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWAS LMDRHEFL NPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
           YSKCGSV RAWEIF+ MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLVEKHGI+PDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMP 480
           IGLLCGCTHGGFVNEGRQ+FNNMK VFSLTPSIEHYGCMVDLLGRAGLL+EAHQLINDMP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480

Query: 481 MKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MKPNAVVWGALLGGC+LHK+THLAE VLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540

Query: 541 IRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPT 600
           IR  MK+ +IQKIR  SWIEI+GIVHEFLVGD SHSLSEKIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+SPPN VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660

Query: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           ITKREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688

[Close]

BLAST of Clc10G22010.1 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 827.4 bits (2136), Expect = 8.5e-240
Identity = 393/689 (57.04%), Postives = 514/689 (74.60%), Query Frame = 0


Query: 1   MTSLTNPSSPVFSKALAIKNYLTNGVNC-FKQLKHIHGRLLRLHLDQDNYLLNMILCCGL 60
           M+ +T PS+   SK   IK  ++  V C    LK IH  L+  HL  D +L+N++L   L
Sbjct: 1   MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60

Query: 61  DFGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFTFPF 120
            F    Y+ L+F+  + PNIFL+N++I G V+   F E +D++ S+R  G   + FTFP 
Sbjct: 61  FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120

Query: 121 VLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKN 180
           VLKAC R    +LG+ +H+LVVK GF++DV   TSL+S+Y      ++A K+FD+IPD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180

Query: 181 VVSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDR 240
           VV+WTA+ +GY  SG+ REAID FKK++EMG+KPDS+ +V+VLSAC  +GD  SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240

Query: 241 YISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQ 300
           Y+ +  M +N FV T+L+++Y KCG ME+A  +F++M EKDIV+WSTMIQGYA NS PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300

Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACAKLGALDLGIWASGLMDRHEFLLNPVLGTALID 360
            ++LF QM  ENLKPD +++VG LS+CA LGALDLG W   L+DRHEFL N  +  ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360

Query: 361 MYSKCGSVARAWEIFKAMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENT 420
           MY+KCG++AR +E+FK M++KD V+ NA I GL+ NGH K  F++F   EK GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420

Query: 421 FIGLLCGCTHGGFVNEGRQYFNNMKWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDM 480
           F+GLLCGC H G + +G ++FN +  V++L  ++EHYGCMVDL GRAG+LD+A++LI DM
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480

Query: 481 PMKPNAVVWGALLGGCRLHKNTHLAEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
           PM+PNA+VWGALL GCRL K+T LAE VLK+LI LEPWN+GNYV LSNIYS   RW+EA 
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540

Query: 541 KIRSAMKQHRIQKIRGYSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVP 600
           ++R  M +  ++KI GYSWIE++G VHEFL  DKSH LS+KIYAKL++LG E++  G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600

Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLIS 660
           TTEFV FD+EEEEKE  LG HSEKLAVA GLIS+    VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660

Query: 661 KITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           KIT+REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685

[Close]

BLAST of Clc10G22010.1 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 601.3 bits (1549), Expect = 9.9e-172
Identity = 312/725 (43.03%), Postives = 443/725 (61.10%), Query Frame = 0


Query: 4   LTNPSSPVFSKALAIKNY----LTNGVNCFKQLKHIHGRLLRLHLDQDNYLLN-MILCCG 63
           L + S P +    +I+N+    L +     + L+ IH +++++ L   NY L+ +I  C 
Sbjct: 20  LPSSSDPPYD---SIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 79

Query: 64  LD--FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEGFLPNNFT 123
           L   F    Y   VF   +EPN+ +WNTM RG         A+ +Y  M   G LPN++T
Sbjct: 80  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 139

Query: 124 FPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDN------------ 183
           FPFVLK+CA+    + G +IH  V+K G D D++V TSL+S+YV+               
Sbjct: 140 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 199

Query: 184 -------------------FDNALKVFDDIPDKNVVSWTAIITGYIGSGQFREAIDAFKK 243
                               +NA K+FD+IP K+VVSW A+I+GY  +G ++EA++ FK 
Sbjct: 200 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 259

Query: 244 LLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 303
           +++  ++PD  ++V V+SACAQ G    G  +  +I D G G N+ +  +L+D+Y KCG 
Sbjct: 260 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 319

Query: 304 MERANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQALDLFFQMQSENLKPDCYAMVGVLSA 363
           +E A  +F  +  KD++SW+T+I GY   +L K+AL LF +M      P+   M+ +L A
Sbjct: 320 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 379

Query: 364 CAKLGALDLGIWASGLMD-RHEFLLN-PVLGTALIDMYSKCGSVARAWEIFKAMEKKDRV 423
           CA LGA+D+G W    +D R + + N   L T+LIDMY+KCG +  A ++F ++  K   
Sbjct: 380 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 439

Query: 424 VWNAMIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNM 483
            WNAMI G +M+G A A F LFS + K GIQPD+ TF+GLL  C+H G ++ GR  F  M
Sbjct: 440 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 499

Query: 484 KWVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHL 543
              + +TP +EHYGCM+DLLG +GL  EA ++IN M M+P+ V+W +LL  C++H N  L
Sbjct: 500 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 559

Query: 544 AEHVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDG 603
            E   + LI++EP N G+YVLLSNIY+++ RW E  K R+ +    ++K+ G S IEID 
Sbjct: 560 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 619

Query: 604 IVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEK 663
           +VHEF++GDK H  + +IY  L+E+   L+ AG VP T  VL ++EEE KE  L  HSEK
Sbjct: 620 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 679

Query: 664 LAVAFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCS 689
           LA+AFGLIS+ P   + +VKNLRVC +CHEA KLISKI KREII RD  RFH F DG CS
Sbjct: 680 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 739

[Close]

BLAST of Clc10G22010.1 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 562.0 bits (1447), Expect = 6.6e-160
Identity = 288/722 (39.89%), Postives = 425/722 (58.86%), Query Frame = 0


Query: 3   SLTNPSSPVFSKALAIKNYLTNGVNCFKQLKHIHGRLLRLHLDQDNYLLNMILCCGL--D 62
           + +NP+ P  +   +    L       +QLK  HG ++R     D Y  + +        
Sbjct: 17  NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76

Query: 63  FGCANYTRLVFAQAKEPNIFLWNTMIRGLVSKDCFDEAIDVYGSMRGEG-FLPNNFTFPF 122
           F    Y R VF +  +PN F WNT+IR   S      +I  +  M  E    PN +TFPF
Sbjct: 77  FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136

Query: 123 VLKACARKLDIRLGLKIHTLVVKAGFDNDVFVKTSLVSLYVKCDNFDNALKVFDDIPDKN 182
           ++KA A    + LG  +H + VK+   +DVFV  SL+  Y  C + D+A KVF  I +K+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196

Query: 183 VVSWTAIITGYIGSGQFREAIDAFKKLLEMGLKPDSFSLVKVLSACAQLGDFTSGEWIDR 242
           VVSW ++I G++  G   +A++ FKK+    +K    ++V VLSACA++ +   G  +  
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256

Query: 243 YISDSGMGRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 302
           YI ++ +  N+ +A ++LDMY KCG++E A  +F+AM EKD V+W+TM+ GYA       
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316

Query: 303 -------------------------NSLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 362
                                    N  P +AL +F ++Q  +N+K +   +V  LSACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376

Query: 363 KLGALDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNA 422
           ++GAL+LG W    + +H   +N  + +ALI MYSKCG + ++ E+F ++EK+D  VW+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436

Query: 423 MIVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVF 482
           MI GL+M+G       +F  +++  ++P+  TF  + C C+H G V+E    F+ M+  +
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496

Query: 483 SLTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHV 542
            + P  +HY C+VD+LGR+G L++A + I  MP+ P+  VWGALLG C++H N +LAE  
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556

Query: 543 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHE 602
             +L+ELEP N G +VLLSNIY+   +WE   ++R  M+   ++K  G S IEIDG++HE
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616

Query: 603 FLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 662
           FL GD +H +SEK+Y KL E+  +LK+ G+ P    VL  IEEEE KE  L  HSEKLA+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676

Query: 663 AFGLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKD 689
            +GLIS+    VIRV+KNLRVCGDCH   KLIS++  REII+RD  RFH F +G CSC D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736

[Close]

BLAST of Clc10G22010.1 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 553.5 bits (1425), Expect = 2.4e-157
Identity = 264/660 (40.00%), Postives = 406/660 (61.52%), Query Frame = 0


Query: 31  QLKHIHGRLLRLHLDQDNYLLNMILCCGLDFGCANYTRLVFAQAKEPNIFLWNTMIRGLV 90
           QLK IH RLL L L    +L+  ++     FG   + R VF     P IF WN +IRG  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 91  SKDCFDEAIDVYGSMRGEGFLPNNFTFPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVF 150
             + F +A+ +Y +M+     P++FTFP +LKAC+    +++G  +H  V + GFD DVF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 151 VKTSLVSLYVKCDNFDNALKVFD--DIPDKNVVSWTAIITGYIGSGQFREAIDAFKKLLE 210
           V+  L++LY KC    +A  VF+   +P++ +VSWTAI++ Y  +G+  EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 211 MGLKPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNMER 270
           M +KPD  +LV VL+A   L D   G  I   +   G+     +  SL  MY KCG +  
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNSLPKQALDLFFQMQSENLKPDCYAMVGVLSACAK 330
           A ++F+ M   +++ W+ MI GYA N   ++A+D+F +M +++++PD  ++   +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 331 LGALDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNAM 390
           +G+L+        + R ++  +  + +ALIDM++KCGSV  A  +F     +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 391 IVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVFS 450
           IVG  ++G A+   SL+  +E+ G+ P++ TF+GLL  C H G V EG  +FN M     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHK 455

Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHVL 510
           + P  +HY C++DLLGRAG LD+A+++I  MP++P   VWGALL  C+ H++  L E+  
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515

Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHEF 570
           ++L  ++P N+G+YV LSN+Y+A+  W+   ++R  MK+  + K  G SW+E+ G +  F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575

Query: 571 LVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
            VGDKSH   E+I  +++ +   LK  G V   +  L D+ +EE E  L  HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635

Query: 631 GLISSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           GLIS+P    +R+ KNLR C +CH A KLISK+  REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of Clc10G22010.1 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 531.6 bits (1368), Expect = 9.6e-151
Identity = 260/657 (39.57%), Postives = 404/657 (61.49%), Query Frame = 0


Query: 33  KHIHGRLLRLHLDQDNYLLNMILCCGLDFGCANYTRLVFAQAKEPNIFLWNTMIRGLVSK 92
           + +HG +L+    + N + N ++   L     +  R VF +  E ++  WN++I G VS 
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 93  DCFDEAIDVYGSMRGEGFLPNNFTFPFVLKACARKLDIRLGLKIHTLVVKAGFDNDVFVK 152
              ++ + V+  M   G   +  T   V   CA    I LG  +H++ VKA F  +    
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334

Query: 153 TSLVSLYVKCDNFDNALKVFDDIPDKNVVSWTAIITGYIGSGQFREAIDAFKKLLEMGLK 212
            +L+ +Y KC + D+A  VF ++ D++VVS+T++I GY   G   EA+  F+++ E G+ 
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 213 PDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNMERANLI 272
           PD +++  VL+ CA+      G+ +  +I ++ +G ++FV+ +L+DMY KCG+M+ A L+
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 273 FNAMSEKDIVSWSTMIQGYAFNSLPKQALDLF-FQMQSENLKPDCYAMVGVLSACAKLGA 332
           F+ M  KDI+SW+T+I GY+ N    +AL LF   ++ +   PD   +  VL ACA L A
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 333 LDLGIWASGLMDRHEFLLNPVLGTALIDMYSKCGSVARAWEIFKAMEKKDRVVWNAMIVG 392
            D G    G + R+ +  +  +  +L+DMY+KCG++  A  +F  +  KD V W  MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 393 LSMNGHAKAVFSLFSLVEKHGIQPDENTFIGLLCGCTHGGFVNEGRQYFNNMKWVFSLTP 452
             M+G  K   +LF+ + + GI+ DE +F+ LL  C+H G V+EG ++FN M+    + P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 453 SIEHYGCMVDLLGRAGLLDEAHQLINDMPMKPNAVVWGALLGGCRLHKNTHLAEHVLKKL 512
           ++EHY C+VD+L R G L +A++ I +MP+ P+A +WGALL GCR+H +  LAE V +K+
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694

Query: 513 IELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKQHRIQKIRGYSWIEIDGIVHEFLVG 572
            ELEP N+G YVL++NIY+ + +WE+ +++R  + Q  ++K  G SWIEI G V+ F+ G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 573 DKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLI 632
           D S+  +E I A L ++   +   G+ P T++ L D EE EKE  L  HSEKLA+A G+I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 633 SSPPNHVIRVVKNLRVCGDCHEAIKLISKITKREIIIRDTNRFHTFIDGSCSCKDYW 689
           SS    +IRV KNLRVCGDCHE  K +SK+T+REI++RD+NRFH F DG CSC+ +W
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

The following BLAST results are available for this feature:

BLAST of Clc10G22010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905109.1	0.0e+00	92.88	putative pentatricopeptide repeat-containing protein At3g08820 [Benincasa hispid...	[more]
KAG6596322.1	0.0e+00	92.30	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_023538778.1	0.0e+00	92.01	putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita pepo s...	[more]
XP_022971519.1	0.0e+00	91.86	putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima...	[more]
XP_022951275.1	0.0e+00	91.72	putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moscha...	[more]

BLAST of Clc10G22010.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR82	1.2e-238	57.04	Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th...	[more]
Q9LN01	1.4e-170	43.03	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	9.3e-159	39.89	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LTV8	3.3e-156	40.00	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9SN39	1.4e-149	39.57	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Clc10G22010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8T1	0.0e+00	91.86	putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxi...	[more]
A0A6J1GIB8	0.0e+00	91.72	putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita mosc...	[more]
A0A5A7TLY9	0.0e+00	90.84	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A5D3DMV5	0.0e+00	90.55	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3B518	0.0e+00	90.55	putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo O...	[more]

BLAST of Clc10G22010.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08820.1	8.5e-240	57.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	9.9e-172	43.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	6.6e-160	39.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G12770.1	2.4e-157	40.00	mitochondrial editing factor 22	[more]
AT4G18750.1	9.6e-151	39.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 355..380 e-value: 0.0033 score: 17.6 coord: 455..480 e-value: 0.0056 score: 16.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 181..215 e-value: 3.3E-6 score: 24.9 coord: 383..417 e-value: 2.7E-4 score: 18.9 coord: 81..113 e-value: 2.4E-8 score: 31.6 coord: 282..316 e-value: 3.6E-5 score: 21.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 381..427 e-value: 9.4E-8 score: 32.2 coord: 178..226 e-value: 1.0E-8 score: 35.2 coord: 77..126 e-value: 8.9E-11 score: 41.8 coord: 279..328 e-value: 1.8E-8 score: 34.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 78..112 score: 11.366925
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..415 score: 10.05157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 350..380 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 179..213 score: 11.684803
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 280..314 score: 11.027125
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 235..337 e-value: 1.7E-21 score: 78.4 coord: 125..234 e-value: 6.6E-23 score: 83.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 354..581 e-value: 4.0E-42 score: 146.7 coord: 12..124 e-value: 2.0E-10 score: 42.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 158..540
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 555..677 e-value: 1.2E-41 score: 141.6
None	No IPR available	PANTHER	PTHR47924:SF28	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATED	coord: 14..681
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 14..681

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc10G22010	Clc10G22010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc10G22010.1-exon	Clc10G22010.1-exon-ClcChr10:35081632..35084354	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc10G22010.1-five_prime_utr	Clc10G22010.1-five_prime_utr-ClcChr10:35081632..35082131	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc10G22010.1-cds	Clc10G22010.1-cds-ClcChr10:35082132..35084198	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc10G22010.1-three_prime_utr	Clc10G22010.1-three_prime_utr-ClcChr10:35084199..35084354	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc10G22010.1	Clc10G22010.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding