Clc01G13520.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc01G13520.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function, DUF584
Location	ClcChr01: 25953939 .. 25955026 (-)
Sequence length	1088
RNA-Seq Expression	Clc01G13520.1
Synteny	Clc01G13520.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCTCTTTCCCCTTCGATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGATTGGATTGAATTGAATTTGAACAAACACGAAGAACAATTATCGCAAAAAAAAAAAAAAAAAAAATCGGAATATTCCAATAGAATATACCAATTCCTTCCATGAGTAAGACTTTTGATCTCTCTTCCACCAAAATTTTTGATCGTTTCCTCTTCCTCTGTTAATTTTTTTCCGCCTTTTGGCCGTCGCATCTGGGCGGCGTTTCGATCGCTCCGACCATCGTTTTCTTTTTCATATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGAATAGAAATATTTTGTACTTTTTTTTTTTTTTTTACTTATTGGTATTATTTTTTTTCCCTCTTCTTCGTTCAAGATTAAATTTGTAGGGCAATTTGGGAAATGTAATGAACTGATCTGAAAAGATGCCCTCTTTAATGGCTATTTAAAAAGAAATTAAAATAAAGAAGTACAATTTTCTTTTTTCTTTTTTTGTTGAAGTATATTAGAATTATTTAATCAATTACTTTGTTTGGTTGGTTGATTTTATTTAAACAGAAGAGAGACTTCTACTCCTCTTTAATT

mRNA sequence

AATTTCTCTTTCCCCTTCGATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGATTGGATTGAATTGAATTTGAACAAACACGAAGAACAATTATCGCAAAAAAAAAAAAAAAAAAAATCGGAATATTCCAATAGAATATACCAATTCCTTCCATGAGTAAGACTTTTGATCTCTCTTCCACCAAAATTTTTGATCGTTTCCTCTTCCTCTGTTAATTTTTTTCCGCCTTTTGGCCGTCGCATCTGGGCGGCGTTTCGATCGCTCCGACCATCGTTTTCTTTTTCATATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGAATAGAAATATTTTGTACTTTTTTTTTTTTTTTTACTTATTGGTATTATTTTTTTTCCCTCTTCTTCGTTCAAGATTAAATTTGTAGGGCAATTTGGGAAATGTAATGAACTGATCTGAAAAGATGCCCTCTTTAATGGCTATTTAAAAAGAAATTAAAATAAAGAAGTACAATTTTCTTTTTTCTTTTTTTGTTGAAGTATATTAGAATTATTTAATCAATTACTTTGTTTGGTTGGTTGATTTTATTTAAACAGAAGAGAGACTTCTACTCCTCTTTAATT

Coding sequence (CDS)

ATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGA

Protein sequence

MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

Homology

[Close]

BLAST of Clc01G13520.1 vs. NCBI nr
Match: XP_038894808.1 (uncharacterized protein LOC120083221 [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 160/170 (94.12%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG+SYFSRSKFRFLPAGDGPDH RGDAVFDFDESDLFN PHSGTSPEFRR ATK RIS
Sbjct: 1   MATGRSYFSRSKFRFLPAGDGPDHCRGDAVFDFDESDLFNSPHSGTSPEFRRPATKTRIS 60

Query: 61  KRISP-VDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFE 120
           KRISP VDAGDR+VTTVSAASLPVNIPDWSKILRNEYIENRRD+FDDDEDEDG GG DFE
Sbjct: 61  KRISPVVDAGDRNVTTVSAASLPVNIPDWSKILRNEYIENRRDNFDDDEDEDGDGGDDFE 120

Query: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170

[Close]

BLAST of Clc01G13520.1 vs. NCBI nr
Match: XP_008462513.1 (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78
Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFLPAGDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF+D++ +D   G +FEE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDD--DGDEFEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Clc01G13520.1 vs. NCBI nr
Match: XP_004139450.1 (uncharacterized protein LOC101217269 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D   G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDD--EGDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Clc01G13520.1 vs. NCBI nr
Match: XP_022970343.1 (uncharacterized protein LOC111469336 [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 143/173 (82.66%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED----EDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D    EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDDEEDGVGGC 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of Clc01G13520.1 vs. NCBI nr
Match: XP_023519114.1 (uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 9.2e-73
Identity = 142/173 (82.08%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF----DDDEDEDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD F    DDD++EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDEDDDDDEEDGVGGG 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL
Match: A0A1S3CH53 (uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFLPAGDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF+D++ +D   G +FEE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDD--DGDEFEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL
Match: A0A0A0LSF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.3e-76
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D   G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDD--EGDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL
Match: A0A6J1I3L6 (uncharacterized protein LOC111469336 OS=Cucurbita maxima OX=3661 GN=LOC111469336 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 143/173 (82.66%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED----EDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D    EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDDEEDGVGGC 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL
Match: A0A6J1HPB6 (uncharacterized protein LOC111464817 OS=Cucurbita moschata OX=3662 GN=LOC111464817 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73
Identity = 143/173 (82.66%), Postives = 152/173 (87.86%), Query Frame = 0


Query: 1   MAT-GKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRI 60
           MAT G +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN PHS  SPEFRRS +K RI
Sbjct: 1   MATGGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPHSSASPEFRRSVSKSRI 60

Query: 61  SKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED---EDGGGGH 120
           SKRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D   +DG GG 
Sbjct: 61  SKRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDEDDGVGGG 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL
Match: A0A6J1FJG2 (uncharacterized protein LOC111444460 OS=Cucurbita moschata OX=3662 GN=LOC111444460 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.1e-53
Identity = 121/173 (69.94%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRR--GDAVFDFDESDLFNPPHSGTSPEFRRSATKKR 60
           MATGKSYFSRSKFRFLPA + P+HR   GD VF+ DESDLFN P  G         +K R
Sbjct: 1   MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTR 60

Query: 61  ISKRISP--VDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGH 120
           ISK IS   VDAGD SVTTV  A+LPVNIPDWSKILRNEYIENRRD F    +E+   G 
Sbjct: 61  ISKPISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEYIENRRDRF----EEEANCGD 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           + E  RFRVPPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Sbjct: 121 ELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 160

[Close]

BLAST of Clc01G13520.1 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 92/170 (54.12%), Postives = 121/170 (71.18%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEF-RRSATKKRI 60
           MATGKSY++R  +RFL           D+  +FDESDLFNP HS  SP+F R+ ++  R 
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHS-DSPDFCRKISSSVRS 60

Query: 61  SKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFE 120
            K+ S  +    + +  +A+SLPVN+PDWSKILR EY +NRR   +D++D+D     D E
Sbjct: 61  GKKSS--NRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDD----DDNE 120

Query: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +G   +PPHEFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 DGGDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Clc01G13520.1 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-33
Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 2   ATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISK 61
           AT KSY+ R   RFLP  D   +  GD+ F+FDESDL++  +   SPEFRR       ++
Sbjct: 4   ATRKSYYQRPSHRFLPT-DRTYNVTGDSEFEFDESDLYS--NRSDSPEFRRKLITS--NR 63

Query: 62  RISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEEG 121
           + SP        TT  A+SLP+N+ +WSKIL     ENR+     + D+DGG G      
Sbjct: 64  KSSPATV----TTTTVASSLPMNVQNWSKILGK---ENRK---SIENDDDGGEG------ 123

Query: 122 RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
             ++PPHE+LAKTR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Sbjct: 124 --KLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of Clc01G13520.1 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 76/173 (43.93%), Postives = 109/173 (63.01%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFN--PPHSGTSPEFRRSATKKR 60
           MA+ K +F + K+ +    +       + VF+FDESD+ N        S + +RS +  R
Sbjct: 1   MASRKLFFVKPKYIY---PEPKPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISR 60

Query: 61  ISKRISPV-DAGDRSVTTVSAASLPVNIPDWSKILRNEYIENR-RDDFDDDEDEDGGGGH 120
           + ++ +   D+G+R +T     SLPVNIPDWSKIL++EY  +   DD  DD+DED    +
Sbjct: 61  LRRKPTKTGDSGNREIT--KTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSN 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           D   GR  +PPHE+LA+ R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Sbjct: 121 D--GGRRMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of Clc01G13520.1 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 76/169 (44.97%), Postives = 94/169 (55.62%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MAT K Y+ R   RF        H    + F+ DE DLFN   S +S  F  S       
Sbjct: 1   MATSKCYYPRPSHRFFTT---DQHVTATSDFELDEWDLFN-TGSDSSSSFSFSDLTITSG 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           +  +       S +  +A+SLPVN+PDWSKIL +   E+RR     +E+E  G      E
Sbjct: 61  RTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGD---ESRRQRKISNEEEVDGDEILCGE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           G  RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Sbjct: 121 GTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

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BLAST of Clc01G13520.1 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 61/152 (40.13%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 32  DFDESDLFNPPHSG--TSPEFR--RSATKKRISKRISPVD-AGDRSVTTVSAASLPVNIP 91
           +F E D+++    G  +SPE +  +S      S   SP +    + V+ V  +S P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 92  DWSKIL-------RNEYIENRRDDFDDDEDEDGGGGHDFEEGRFRVPPHEF----LAKTR 151
           DWSK+        R+ ++ +   D DDDED+DG            VPPHE+    LA+T+
Sbjct: 86  DWSKVYGDSKSNRRSSHLHSHAAD-DDDEDDDG----------CMVPPHEWVARKLARTQ 145

Query: 152 IASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF 168
           I+SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Sbjct: 146 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

The following BLAST results are available for this feature:

BLAST of Clc01G13520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894808.1	6.8e-84	94.12	uncharacterized protein LOC120083221 [Benincasa hispida]	[more]
XP_008462513.1	5.6e-78	88.76	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
XP_004139450.1	1.5e-75	86.39	uncharacterized protein LOC101217269 [Cucumis sativus]	[more]
XP_022970343.1	4.1e-73	82.66	uncharacterized protein LOC111469336 [Cucurbita maxima]	[more]
XP_023519114.1	9.2e-73	82.08	uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc01G13520.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G13520.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CH53	2.7e-78	88.76	uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=...	[more]
A0A0A0LSF7	7.3e-76	86.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1	[more]
A0A6J1I3L6	2.0e-73	82.66	uncharacterized protein LOC111469336 OS=Cucurbita maxima OX=3661 GN=LOC111469336...	[more]
A0A6J1HPB6	7.6e-73	82.66	uncharacterized protein LOC111464817 OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A6J1FJG2	5.1e-53	69.94	uncharacterized protein LOC111444460 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]

BLAST of Clc01G13520.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60680.1	1.2e-41	54.12	Protein of unknown function, DUF584	[more]
AT3G45210.1	9.9e-33	50.60	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.1e-28	43.93	Protein of unknown function, DUF584	[more]
AT2G28400.1	1.7e-24	44.97	Protein of unknown function, DUF584	[more]
AT4G04630.1	2.4e-18	40.13	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 47..169 e-value: 2.4E-36 score: 126.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..65
None	No IPR available	PANTHER	PTHR46525:SF2	EMB\|CAB72159.1	coord: 1..169
None	No IPR available	PANTHER	PTHR46525	EMB\|CAB72159.1	coord: 1..169

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc01G13520	Clc01G13520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G13520.1-exon	Clc01G13520.1-exon-ClcChr01:25953939..25955026	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G13520.1-three_prime_utr	Clc01G13520.1-three_prime_utr-ClcChr01:25953939..25954497	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G13520.1-cds	Clc01G13520.1-cds-ClcChr01:25954498..25955007	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G13520.1-five_prime_utr	Clc01G13520.1-five_prime_utr-ClcChr01:25955008..25955026	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc01G13520.1	Clc01G13520.1-protein	polypeptide