Clc01G13520 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G13520
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function, DUF584
LocationClcChr01: 25953939 .. 25955026 (-)
RNA-Seq ExpressionClc01G13520
SyntenyClc01G13520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCTCTTTCCCCTTCGATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGATTGGATTGAATTGAATTTGAACAAACACGAAGAACAATTATCGCAAAAAAAAAAAAAAAAAAAATCGGAATATTCCAATAGAATATACCAATTCCTTCCATGAGTAAGACTTTTGATCTCTCTTCCACCAAAATTTTTGATCGTTTCCTCTTCCTCTGTTAATTTTTTTCCGCCTTTTGGCCGTCGCATCTGGGCGGCGTTTCGATCGCTCCGACCATCGTTTTCTTTTTCATATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGAATAGAAATATTTTGTACTTTTTTTTTTTTTTTTACTTATTGGTATTATTTTTTTTCCCTCTTCTTCGTTCAAGATTAAATTTGTAGGGCAATTTGGGAAATGTAATGAACTGATCTGAAAAGATGCCCTCTTTAATGGCTATTTAAAAAGAAATTAAAATAAAGAAGTACAATTTTCTTTTTTCTTTTTTTGTTGAAGTATATTAGAATTATTTAATCAATTACTTTGTTTGGTTGGTTGATTTTATTTAAACAGAAGAGAGACTTCTACTCCTCTTTAATT

mRNA sequence

AATTTCTCTTTCCCCTTCGATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGATTGGATTGAATTGAATTTGAACAAACACGAAGAACAATTATCGCAAAAAAAAAAAAAAAAAAAATCGGAATATTCCAATAGAATATACCAATTCCTTCCATGAGTAAGACTTTTGATCTCTCTTCCACCAAAATTTTTGATCGTTTCCTCTTCCTCTGTTAATTTTTTTCCGCCTTTTGGCCGTCGCATCTGGGCGGCGTTTCGATCGCTCCGACCATCGTTTTCTTTTTCATATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGAATAGAAATATTTTGTACTTTTTTTTTTTTTTTTACTTATTGGTATTATTTTTTTTCCCTCTTCTTCGTTCAAGATTAAATTTGTAGGGCAATTTGGGAAATGTAATGAACTGATCTGAAAAGATGCCCTCTTTAATGGCTATTTAAAAAGAAATTAAAATAAAGAAGTACAATTTTCTTTTTTCTTTTTTTGTTGAAGTATATTAGAATTATTTAATCAATTACTTTGTTTGGTTGGTTGATTTTATTTAAACAGAAGAGAGACTTCTACTCCTCTTTAATT

Coding sequence (CDS)

ATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGGCGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGA

Protein sequence

MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Homology
BLAST of Clc01G13520 vs. NCBI nr
Match: XP_038894808.1 (uncharacterized protein LOC120083221 [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 160/170 (94.12%), Postives = 163/170 (95.88%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG+SYFSRSKFRFLPAGDGPDH RGDAVFDFDESDLFN PHSGTSPEFRR ATK RIS
Sbjct: 1   MATGRSYFSRSKFRFLPAGDGPDHCRGDAVFDFDESDLFNSPHSGTSPEFRRPATKTRIS 60

Query: 61  KRISP-VDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFE 120
           KRISP VDAGDR+VTTVSAASLPVNIPDWSKILRNEYIENRRD+FDDDEDEDG GG DFE
Sbjct: 61  KRISPVVDAGDRNVTTVSAASLPVNIPDWSKILRNEYIENRRDNFDDDEDEDGDGGDDFE 120

Query: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170

BLAST of Clc01G13520 vs. NCBI nr
Match: XP_008462513.1 (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78
Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFLPAGDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF+D++ +D   G +FEE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDD--DGDEFEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

BLAST of Clc01G13520 vs. NCBI nr
Match: XP_004139450.1 (uncharacterized protein LOC101217269 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D   G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDD--EGDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

BLAST of Clc01G13520 vs. NCBI nr
Match: XP_022970343.1 (uncharacterized protein LOC111469336 [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 143/173 (82.66%), Postives = 151/173 (87.28%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED----EDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D    EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDDEEDGVGGC 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

BLAST of Clc01G13520 vs. NCBI nr
Match: XP_023519114.1 (uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 9.2e-73
Identity = 142/173 (82.08%), Postives = 151/173 (87.28%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF----DDDEDEDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD F    DDD++EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDEDDDDDEEDGVGGG 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

BLAST of Clc01G13520 vs. ExPASy TrEMBL
Match: A0A1S3CH53 (uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFLPAGDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF+D++ +D   G +FEE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDD--DGDEFEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

BLAST of Clc01G13520 vs. ExPASy TrEMBL
Match: A0A0A0LSF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.3e-76
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D   G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDD--EGDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

BLAST of Clc01G13520 vs. ExPASy TrEMBL
Match: A0A6J1I3L6 (uncharacterized protein LOC111469336 OS=Cucurbita maxima OX=3661 GN=LOC111469336 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 143/173 (82.66%), Postives = 151/173 (87.28%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATG +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN P S  SPEFRRS +K RIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED----EDGGGGH 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D    EDG GG 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDDEEDGVGGC 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

BLAST of Clc01G13520 vs. ExPASy TrEMBL
Match: A0A6J1HPB6 (uncharacterized protein LOC111464817 OS=Cucurbita moschata OX=3662 GN=LOC111464817 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73
Identity = 143/173 (82.66%), Postives = 152/173 (87.86%), Query Frame = 0

Query: 1   MAT-GKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRI 60
           MAT G +YFSRSKFRFLP  DGPDHRR D+VF+ DESDLFN PHS  SPEFRRS +K RI
Sbjct: 1   MATGGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPHSSASPEFRRSVSKSRI 60

Query: 61  SKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDED---EDGGGGH 120
           SKRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYIENRRD FDDD+D   +DG GG 
Sbjct: 61  SKRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFDDDDDDDEDDGVGGG 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           DFE+GRFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

BLAST of Clc01G13520 vs. ExPASy TrEMBL
Match: A0A6J1FJG2 (uncharacterized protein LOC111444460 OS=Cucurbita moschata OX=3662 GN=LOC111444460 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.1e-53
Identity = 121/173 (69.94%), Postives = 132/173 (76.30%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRR--GDAVFDFDESDLFNPPHSGTSPEFRRSATKKR 60
           MATGKSYFSRSKFRFLPA + P+HR   GD VF+ DESDLFN P  G         +K R
Sbjct: 1   MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTR 60

Query: 61  ISKRISP--VDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGH 120
           ISK IS   VDAGD SVTTV  A+LPVNIPDWSKILRNEYIENRRD F    +E+   G 
Sbjct: 61  ISKPISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEYIENRRDRF----EEEANCGD 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           + E  RFRVPPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Sbjct: 121 ELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 160

BLAST of Clc01G13520 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 92/170 (54.12%), Postives = 121/170 (71.18%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEF-RRSATKKRI 60
           MATGKSY++R  +RFL           D+  +FDESDLFNP HS  SP+F R+ ++  R 
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHS-DSPDFCRKISSSVRS 60

Query: 61  SKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFE 120
            K+ S  +    + +  +A+SLPVN+PDWSKILR EY +NRR   +D++D+D     D E
Sbjct: 61  GKKSS--NRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDD----DDNE 120

Query: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +G   +PPHEFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 DGGDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

BLAST of Clc01G13520 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-33
Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 0

Query: 2   ATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISK 61
           AT KSY+ R   RFLP  D   +  GD+ F+FDESDL++  +   SPEFRR       ++
Sbjct: 4   ATRKSYYQRPSHRFLPT-DRTYNVTGDSEFEFDESDLYS--NRSDSPEFRRKLITS--NR 63

Query: 62  RISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEEG 121
           + SP        TT  A+SLP+N+ +WSKIL     ENR+     + D+DGG G      
Sbjct: 64  KSSPATV----TTTTVASSLPMNVQNWSKILGK---ENRK---SIENDDDGGEG------ 123

Query: 122 RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
             ++PPHE+LAKTR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Sbjct: 124 --KLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

BLAST of Clc01G13520 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 76/173 (43.93%), Postives = 109/173 (63.01%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFN--PPHSGTSPEFRRSATKKR 60
           MA+ K +F + K+ +    +       + VF+FDESD+ N        S + +RS +  R
Sbjct: 1   MASRKLFFVKPKYIY---PEPKPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISR 60

Query: 61  ISKRISPV-DAGDRSVTTVSAASLPVNIPDWSKILRNEYIENR-RDDFDDDEDEDGGGGH 120
           + ++ +   D+G+R +T     SLPVNIPDWSKIL++EY  +   DD  DD+DED    +
Sbjct: 61  LRRKPTKTGDSGNREIT--KTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSN 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           D   GR  +PPHE+LA+ R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Sbjct: 121 D--GGRRMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

BLAST of Clc01G13520 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 76/169 (44.97%), Postives = 94/169 (55.62%), Query Frame = 0

Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MAT K Y+ R   RF        H    + F+ DE DLFN   S +S  F  S       
Sbjct: 1   MATSKCYYPRPSHRFFTT---DQHVTATSDFELDEWDLFN-TGSDSSSSFSFSDLTITSG 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDGGGGHDFEE 120
           +  +       S +  +A+SLPVN+PDWSKIL +   E+RR     +E+E  G      E
Sbjct: 61  RTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGD---ESRRQRKISNEEEVDGDEILCGE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           G  RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Sbjct: 121 GTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

BLAST of Clc01G13520 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 61/152 (40.13%), Postives = 89/152 (58.55%), Query Frame = 0

Query: 32  DFDESDLFNPPHSG--TSPEFR--RSATKKRISKRISPVD-AGDRSVTTVSAASLPVNIP 91
           +F E D+++    G  +SPE +  +S      S   SP +    + V+ V  +S P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 92  DWSKIL-------RNEYIENRRDDFDDDEDEDGGGGHDFEEGRFRVPPHEF----LAKTR 151
           DWSK+        R+ ++ +   D DDDED+DG            VPPHE+    LA+T+
Sbjct: 86  DWSKVYGDSKSNRRSSHLHSHAAD-DDDEDDDG----------CMVPPHEWVARKLARTQ 145

Query: 152 IASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF 168
           I+SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Sbjct: 146 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038894808.16.8e-8494.12uncharacterized protein LOC120083221 [Benincasa hispida][more]
XP_008462513.15.6e-7888.76PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo][more]
XP_004139450.11.5e-7586.39uncharacterized protein LOC101217269 [Cucumis sativus][more]
XP_022970343.14.1e-7382.66uncharacterized protein LOC111469336 [Cucurbita maxima][more]
XP_023519114.19.2e-7382.08uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CH532.7e-7888.76uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=... [more]
A0A0A0LSF77.3e-7686.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1[more]
A0A6J1I3L62.0e-7382.66uncharacterized protein LOC111469336 OS=Cucurbita maxima OX=3661 GN=LOC111469336... [more]
A0A6J1HPB67.6e-7382.66uncharacterized protein LOC111464817 OS=Cucurbita moschata OX=3662 GN=LOC1114648... [more]
A0A6J1FJG25.1e-5369.94uncharacterized protein LOC111444460 OS=Cucurbita moschata OX=3662 GN=LOC1114444... [more]
Match NameE-valueIdentityDescription
AT5G60680.11.2e-4154.12Protein of unknown function, DUF584 [more]
AT3G45210.19.9e-3350.60Protein of unknown function, DUF584 [more]
AT5G03230.11.1e-2843.93Protein of unknown function, DUF584 [more]
AT2G28400.11.7e-2444.97Protein of unknown function, DUF584 [more]
AT4G04630.12.4e-1840.13Protein of unknown function, DUF584 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 47..169
e-value: 2.4E-36
score: 126.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..65
NoneNo IPR availablePANTHERPTHR46525:SF2EMB|CAB72159.1coord: 1..169
NoneNo IPR availablePANTHERPTHR46525EMB|CAB72159.1coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G13520.1Clc01G13520.1mRNA