Clc01G09030.2 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc01G09030.2
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pre-mRNA-splicing factor 38
Location	ClcChr01: 9755426 .. 9762815 (-)
Sequence length	1374
RNA-Seq Expression	Clc01G09030.2
Synteny	Clc01G09030.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGATGTAAGATATTGTTTTATAGCTTTTCTGTCATGGTCCATCTATTCATTTTTTTTTTTTGTAAATATATAATGTGGTGCATACCAATACAGACCGGAGGGAAATTATTCTGATCTTTTATTAAGAAAATATAGAGCTAGTATTTGTACTCACGTTCACAGTCAATCAACAAAGTTACTGTAGGCAACTTGAGAAACTTAACAGTAACTCATGCTATAAAACAAAGGAAAAATTCCAATGTAAACAGAAACAAACCACATCGTGATGGACATTAAGACTAACAGTCTGACAGCTTGCAATGTGTATATTTTTGAAGAGTTAATTAATTTTCTCCAATGTTGCATGTACTTTTACAATCATTACTGTGCTCTGGAAAAATATTAATATATTATATCTTGTTTGGAACTTAGATTAGTAACGTACAAGTTGGATCAAATATAGCTGATGTAAATGGTTTACTATGGTAATTAGTTAACTTCAGTGTAATTGGGACAACCAGAGGTAGATTTTGAAGTGCATTCTTGAAGTATCTGTTTCATATAGAGGATAGATTGTAATTTTCTTGAGGGCATTCTTGAGCATGATTAGATTCTTTATCTTTTCATCATATTTACATTATAATGCATTTCAGCTTGATCTTTGTTGGTAGAAGTAGTAATCCATGGATCTTCACGTAATCTGGATTGCTAATTGCTTTTGCTTTTGTCTTGTTATTTTCTTTACAAGTTTCTGTTGCGTTTGAGGATTGCTAGTTGATTAATCAGTTTCCATCTGGACTTCTAAATATTTATTTCTCTCAAATTTCGGATGTTCAATGAATAAATAACTTGTTTTTGGAGGTTCTTGGTCATTGTCACCTTGAACAACTACTAATCTAACCTAATTTACTGTTTGAAAATATGTTGGAGACTAGCTCTTCGTATACTGATGTGTTTGGGTTGCTCTCTTTCTAAGTCCTACTTTATTCTATCGCTTCAATTTTGTCCTTTATGGTCTGATGGTTCTGTTGTACTAGAATCATTGGTACCTGATATGAACATTGCTCTTTATCCTCTCCCCAAACACAAGGGAAAAGGAGTCTCTTTGTGAACAGAAAAATTTTCTTCTGCCATCAACGATTCCCCAATTCCCTGCTAAGAAGATTACTAGAGAAGCTTTCCAACTATCCTTATAAAACAATAAAACAGAATAATTGCAAGAAGACCCGAGCCAAAAAGCTTGATCCTGAAGTATGAAGTAAATTAGGTAAAAATTGTCATGAGTTTTCTACATTTTCCTTGAAACATCTGTAGGTTTCTTTTTTATAAAGTGCCCCCAACTGTCGGTTTTATTCTACTTGTATAGTAAAATAGCTGAGTGTTGAATAGTATTATGATGAATTACAAAACTATTTTTCCTTGATATCAAAGCGTTTTTTTCCATAAGCATCTCAAGACATGAAAAATTTATCATTCAAAAGAATAGCATCAGTCATAAAACCTTAACTGCTTTTAAATAATACAGAATGAGAATAGTTTTATGGAATAACTTGCTAGTAATCAGAGTTAGCCCTTAGTTTGTGGAAGTGATTAAGGATCGCTTTTTAGAAGAGGTCAAAATCACCAATGAATATGTCTTGAGAGCTGTTGGTTATTATGGATTTTAGAATGGTAAAATGCTGATACAATAAGCAGAATGTTTGATTAGTTTTAAATGTCTGCTTAAACAATTTTTTCTATGAAAAGAAAGTTTTGCTTGTGATCATACTGCAGTCGGCTTCTCTTTCTTATTCAAATACGGTAATACACCATTTTTGCAAGTCTTCAATTAGGAGCAGAGGTCTCCTCTCTCTTAAATTTATTATTCTGATTTGATAATGGTTGTGCTATTATTTGGATTAGAAATTTTTAGTGAACTTTATATTAGAAATTATTTTGGTATCTTCACTGATATTTGTCTGTTGCCCTTTATGCTAGTTCCTGCATTACTCTATTTCTTTAGTTTATAAAACTGTCTGATACATGCATATGCTTGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAACCTTGTCACTTTGGGTTGCTGTGCCCTTTCTCACACCATAAATTAATAGTGCCTTTGCTTTGCTTAGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTTATTTTTATTTTCTAAAGATACTGAGATTATTTCAGTCTCTTGGATTTATTTATCTGTAAATTGATATTCTTTAATGAGTGCACAATGTTTCCCGTATGAATATTGCATCCTTTTGTTTTATGCTCTTAATAAGGTCTGAATACATCAAAGGAATTAATGTGGTTACTTATATTCTTGCATGCCTCTCTTTCTGCATAATTTATTTTCTTACCTGATAATTATGATGCCTTTATCTGTACGATGTTTAAGAAGTTATGGTTCTAGTGGTATTACACTCGGTTCTGCTACCTCTTGATGAAATTTCTTAAATTATTTTTTCCAGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGTATGTGATACTGATGCATATATGAGCTTGATTATTATTATTATTTTAATTTTGTGGATTGTTGCTTAAGCATTATGGTTAGGGTGCATGTGTTTCGCTTAAAATTTCCTTTAATGTGACTGTAAGTTGCTTTCTGGTTTCTGCTACCTTCAATGTATGTATATATGCTGATAATTTAGTAAGTGCAGACTGATTTTCTATATTATTGAGATGTCATATATGCTTGTGAAGGTATTTGAACTTGAGGCCGTTGATAGTTTCTAACCTAGGAATTATTCAATGTCCTTTTATTCGACTTTCTTCTGCAACCCCTTCTTTTGGGGGGCATTCACATGACCCATCCTTTGGAGAAGGGACACCTTTTCCCTTTGTCTGTTAGGCTGTTTTGGCTGGATTGGTGCCGTTTGAGTGAAGTTTAATGTAAATTACAAAAGAGGCACTAGCGTCCATATGATTTATAAAACATATTGCTAATAAGCTGAGAGAGAAGTAAGGCTATGGTCTCAAAAAGAGGGGAGAATTTACATCAAGTGAGAGCGAGAACAATATAAGTTAGGTGTTAAAGAAAGAGTCAAAATTTGTAGCTTTTTCCTTGAAGATGTGATGGTTTCATTGGGTGGGGGGTGTATGGAGAGGTCAGTAAAGGTACTGATAAGTAAGGGGCACAAGGCTTTTGGAGACTCCTTTGGCATGTATTGTGGGTTCCAAAAAGGTAAGAGGTAACTCCGGCGGCTTTGGCTTTGGGCAGTTGACATCAGCAATGTGACCAACGGAGTAGCCTAGTCTTCATTGAAGTTTAACTTTTTCGTACCTGGAAAAAATTTGACTTCCTACTACAAAAGTTGGAATTCACTGTGCATGATGAATGTATTTCCAACGTTTCTTCTCTGGCATGAGTTTATTTGTGGTATTTTGTTGATTATCAATTGCTTTGAGTGATAAGTGCATTAAATAGTCCACCGCTGAACTCTAAGATACTTGCCTCTTGGTGAATGAGAAGTCTTTTATGGGGTTCTTATCTTTGTTTCATCATCCTGAATTCACCACCGGTTGGTCTTTTGTTTGGAAACCCAAAGTCCTCATTATTCGTGGCTTTTACTATTGCTGGTAATGTTTGACCTGTTGATATCAAGATCATCAATGAGTAATCCTGCTGTTCTCTTTAATTGTCACACAGTTGGCTTCAAAGTTCGAAATTCTCTTCGACGCTTCTTTTGGTCTGGAATTCGAAGGGGTCTTTCCTCTTTGATGAGTTGGATTGTTAAGATATCCATGACATTTTAAGTTCTTTGCTTGGCAAGTTTTGCATGGAAAAGTGAACGTCCAAAACCATCTCAAGAGATTTTTCCCTTGTGATGCACGTGCAATGCACGTTCTCTATGGGCAGTTAGAAGAGGATCTTGAACATTTTTTGTGAGGTTGCTAGTTTGCTTATTCCCTTGGAGTCGATGCTTGAAGTTGTTTGGGATTTGTTTGGCTCTTAGCAAAAATTGCAGCTTTATGATTGAGGAGGCTCTCTTGAACTTTCCCTTTTAGAATAAGTGTAGCATTCTGTGGCATGGATTTTTTGTTTTTGCTAGTTTTTGCGGAATTTGGCTAGTGATGAAAAGTAGGATTTATTGAGGGGTGAATAGATCCTGGGAGGAGGTTGCTAGGTTTAATGCTTTTTTATGGGCGTTCACTACTTAAGCTTTTGTAATTACTAACCTCTTATTCTTTTGGATTGGAGGCTCTTCTTGTAGTTATTGTTAGGATGTTTTTATGGCTTTTTTCCTTGTACTTCTTTCATTTTTATAGAATGAAAGTTTGGTTTCTTATAAACAAAAATCTTAGCCAGTTTTTCCTAGGGATGGTTTGTGGTAAGTGGGATTTGGAAGTGTATATTCTCTTGCCTCCTTTTGGGCCTTTCCAGTAAACACCCTTTACATTGTTCTACAGAGCTCGTATAGTCTATCAGAGAAATCTTTTGTTACTCCTTTGGTTTGGGATCAGGGATCCTACCTTTTTTTAGTAAATTTCACATCAGAGGAATTTGTTTCTTTTATAAAAAAGGAAAGTAAACAGCATTTTTCATGTCTTTTTTCATTTGTTGGTTGTAGTCCTTTTCCCCTTCCGACAAATATCAGAAAATAAAATTCTTCCTTACAAATCTATGGTGTTTTGCATGTTTCATTTTTAATGGATTTAATAAGAATCTAAAACTATTTTTAATTGAATTAATAAGAATCTAAAGCTATAAAAGGCAGAAAAAGAACTAACAGACTTATCACTTATGTGTTTCAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGGTCAGGTTATATACCAAACATTTTCCCCTTAATTATCTTGTTTATTGCTCATATCTTTCTTTTTTTCTTTCCTTTTTAACATCCTTGCGTCACAGACATGATAAGTTGTGTGTATATACAGTTGCTGTTGGCATTTCTCTAGTGTTTAACCATGGGAACGCTGCATTATTGATTCATGGTTGGAAGATATTGTTAAGAGTTGTATATAGAGTATAATATAGTTAAAAGATTTTCATCAAGAGACAAGAAGATGCAAAAAGGTTCAAGAAAAGAACTACAGCATAACAGTAACCTTTCCCTCCCGATTTAAGTAATTAGGTCCTTGTTTCCATTAAACCATCTCATATTTTGTTGGTTTATCATGGTGATTCGAAGCCATGTTCTCTGGCATGAGCTGGTGAAGTTGACTTCACAATGTGCCGTTTGGTGTCTTGTCCACTTTATTGTTGTCTTCATTTTTGTTATTTGTCTTTTCCAATGTATCCAGTATTTTTCTTAACTTTCCTTATATAACCTTTTCTTGTAGTTCTATTTCCCACTTATGCTCCTTGTAGACTAGAAGGAGCCTTTTACATGAAGTATGGTTGTGTTGGCTTTTACCTGAGATACCCTCCAGAGCTCTGCCCCTTCATGAACTTTCCTTACACTATTTCAAAATCCAGATCATGAATAAAATGCTTTATGGAATGTTCTTGAAATATTTAAATCAATCATTGTTTGGGTTCGATTGTTGCTCTGTTGTAGTATATGGTGAAAAGAGATGAATCAAGTGTATAAGATGAACAAAATAAAATATGAGACCAAGGTTTTGATTTTATCACATTGTTGTTATCTAGAAGTGGTTTAACTCATGTGAACAGCCCTCAATACCTTTTCTTTGTTCAGCCATAGCCGCACAACTATTCGAGCATAGGAGCAAACTGAAATGTTGTGTGTTTTAATGCTTAATCAGTAGAAAGCTGATGTAAATCTTGATATCCATGTATGGGTTTCATTTGGCCAACCGAGCGGAATGATAGTTAAGCTTTTATTTTATTTGTTTTTTTAGCTTTTAAACGGCAAAAATTGTGTTTGGTGTTATCTGGTAGTATTAATGTTTCTATTATGTCTGCCAACAAACGGAATGATCATTATTCCACATGTTTAAACTGGAACATATGAAACACATATCTGCCTTTAGACATATTATTATTGTTATTTTTGAATCCTCGTCCTTGTAGCTAAGCAGGTACCCACATTTTGTTTGCCAATTGCAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

mRNA sequence

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGATATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGATATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK

Homology

[Close]

BLAST of Clc01G09030.2 vs. NCBI nr
Match: XP_038875168.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 788.5 bits (2035), Expect = 3.1e-224
Identity = 430/469 (91.68%), Postives = 434/469 (92.54%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLW WFEPYVKDEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWTWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDS----------RERSRDRDYDRERSRD 300
           RRTLPPS NDRD SDDLRRSPSSRRSQSREHPDS          RERSRDRDYDRERSRD
Sbjct: 241 RRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 RDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERD--RDRERSYDYDRR 360
           RDHDR+RDRGRDRDRDRE+DRDREKYRDRERDRDRERERARDRERD  RDRERSYDYDRR
Sbjct: 301 RDHDRDRDRGRDRDRDREYDRDREKYRDRERDRDRERERARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE 420
           THY DRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE
Sbjct: 361 THYNDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE 420

Query: 421 KTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 458
           KTS ISSNLAKLKDIYGDVSEQKGDSS+ERVNRRDSSGEEVIRLGG WK
Sbjct: 421 KTSSISSNLAKLKDIYGDVSEQKGDSSKERVNRRDSSGEEVIRLGGYWK 453

[Close]

BLAST of Clc01G09030.2 vs. NCBI nr
Match: XP_011655154.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742200.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742201.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742202.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >KGN51086.2 hypothetical protein Csa_023135 [Cucumis sativus])

HSP 1 Score: 768.5 bits (1983), Expect = 3.3e-218
Identity = 418/459 (91.07%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRG 300
           RRTLP S NDRD +DDLRRSPS RRSQSREHPDSRERSRDR++DRERSRDRD+DR+RDRG
Sbjct: 241 RRTLPSSANDRDNNDDLRRSPSIRRSQSREHPDSRERSRDREFDRERSRDRDYDRDRDRG 300

Query: 301 RDRDRDREHDRDREKYRDRERDRDRERERARDRERD--RDRERSYDYDRRTHYTDRESRR 360
           RDRDRDREHDRDREKYRDRERDRDRERE+ARDRERD  RDRERSYDYDRRTHY+DRESRR
Sbjct: 301 RDRDRDREHDRDREKYRDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRR 360

Query: 361 DFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLA 420
           DFERSSRDGG+RHYRRSRSRSRSRSRSRSLQT   HHEREPSPARGGTTEK S+ISSNLA
Sbjct: 361 DFERSSRDGGTRHYRRSRSRSRSRSRSRSLQT---HHEREPSPARGGTTEKASVISSNLA 420

Query: 421 KLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 458
           KLKDIYGDVSEQKGDSS  +VNRRD SGEEVIRLGGSWK
Sbjct: 421 KLKDIYGDVSEQKGDSS--KVNRRDGSGEEVIRLGGSWK 438

[Close]

BLAST of Clc01G09030.2 vs. NCBI nr
Match: KAG7016573.1 (Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 754.2 bits (1946), Expect = 6.5e-214
Identity = 414/478 (86.61%), Postives = 430/478 (89.96%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRE---- 300
           RRTLP S  DRD SDDLRRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DRE    
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ----RDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYT 360
               RDRGRDRDR+REHDRDREKYRDRERDR+R+RER + R+R+RDRERSYDYDRRTHYT
Sbjct: 301 REFDRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERDRERSYDYDRRTHYT 360

Query: 361 DRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQT-------GNAHHEREPSPARGG 420
           DRE RRDFERSSRDGG+RHYRRSRSRSRSRSRSRSLQT       G+ HHEREPSPARG 
Sbjct: 361 DREGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHGHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK------GDSSRERVNRRDSSGEEVIRLGGSWK 458
           T+EKTSIISSNLAKLKD+YGDVSEQK      GDSS+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGGDSSKERINRRDSSGEEVIRLGGSWK 462

[Close]

BLAST of Clc01G09030.2 vs. NCBI nr
Match: TYK18924.1 (pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa])

HSP 1 Score: 753.4 bits (1944), Expect = 1.1e-213
Identity = 419/489 (85.69%), Postives = 430/489 (87.93%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DDLRRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ----RERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERA 360
               RERSRDRDYDRERSRDRD+DR+RDRGRDRDRDRE DRDREKYRDRERDRDRERE+A
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKA 360

Query: 361 RDRERD--RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSL 420
           RDRERD  RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSL
Sbjct: 361 RDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSL 420

Query: 421 QTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEE 458
           QT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEE
Sbjct: 421 QT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEE 468

[Close]

BLAST of Clc01G09030.2 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 753.4 bits (1944), Expect = 1.1e-213
Identity = 418/474 (88.19%), Postives = 430/474 (90.72%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRE---- 300
           RRTLP S  DRD SDDLRRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DRE    
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ----RDRGRDRDRDREHDRDREKYRDRERD--RDRERERARDRERD--RDRERSYDYDRR 360
               RDRGRDRDR+REHDRDREKYRDRERD  RDRERE+ARDRERD  RDRERSYDYDRR
Sbjct: 301 REYDRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPARGG 420
           THYTDRE RRDFERSSRDGG+RHYRRSRSRSRSRS SRSLQTG   + HHEREPSPARG 
Sbjct: 361 THYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK--GDSSRERVNRRDSSGEEVIRLGGSWK 458
           T+EKTSIISSNLAKLKD+YGDVSEQK  GD S+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot
Match: Q8RWB1 (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.3e-129
Identity = 286/459 (62.31%), Postives = 328/459 (71.46%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRM TMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGR 301
           R  PP+  DR+  D++++  S RRSQSR++        DRD DR+R R+R+ DRER+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFE 361
           DR            YR+RERD   +R   RD                  Y  R  R D+E
Sbjct: 303 DR------------YRERERDYGNDRRSRRD------------------YDSRSRRNDYE 362

Query: 362 RSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNLAK 421
               D  SRH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNLAK
Sbjct: 363 ----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNLAK 393

Query: 422 LKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 458
           LKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 LKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot
Match: Q5VTL8 (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.4e-48
Identity = 182/479 (38.00%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 177

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 178 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 237

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 238 PVPVQKNIDQQIKTRPRKIKKDGKEG-AEEIDRHVERRRSRSPRRSLS---PRRSPRRSR 297

Query: 254 TRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  +R RSR R+ 
Sbjct: 298 SR--SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRER 357

Query: 314 DRERDRGRD-----RDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERS------ 373
            R R R RD     RDRDRE +++ E+ R R+RD D+ER   R++ER+R RERS      
Sbjct: 358 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSR 417

Query: 374 ---------YDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRS---RSRSRSLQT 433
                     D D R H  D+   +  ++ SR        RSRSRSR+   RSRSRS + 
Sbjct: 418 GEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK 477

Query: 434 GNAH----HEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSS 446
            + H     E+    +R G+  +T  +  +  K +        +K   S+ER ++RD S
Sbjct: 478 SSKHKNESKEKSNKRSRSGSQGRTDSVEKS-KKREHSPSKEKSRKRSRSKERSHKRDHS 513

[Close]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot
Match: Q80SY5 (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-47
Identity = 181/473 (38.27%), Postives = 244/473 (51.59%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 178

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 179 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 238

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 239 PVPVQKNIDQQIKTRPRKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSR 298

Query: 254 TRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  DR RSR R+ 
Sbjct: 299 SR--SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRER 358

Query: 314 DRERDRGRDRD---RDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRT- 373
            R R R RDR    RDR+ +R++E  R R RDRD ++ER  DRERDR+R R    ++R+ 
Sbjct: 359 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSR 418

Query: 374 -------HYTDRESR--RDFERSSRDGGSR-------HYRRSRS---RSRSRSRSRSLQT 433
                  H  D+E R  RD ++ S+   SR       H  RSR+   RSRSRS+ +S + 
Sbjct: 419 GDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRH 478

Query: 434 GNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRD 444
            N   E+    +R G+  +T  +     K +        +K   S++R ++R+
Sbjct: 479 KNESKEKANKRSRSGSQGRTGSVEKR--KREHSPSREKSRKRSRSQDRSHKRE 507

[Close]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot
Match: Q6AXY7 (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-47
Identity = 181/480 (37.71%), Postives = 246/480 (51.25%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 177

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 178 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 237

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 238 PVPVQKNIDQQIKTRPRKIKKDGKEG-VEEIDRHIERRRSRSPRRSLS---PRRSPRRSR 297

Query: 254 TRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  DR RSR R+ 
Sbjct: 298 SR--SHHRDGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSRSRER 357

Query: 314 DRERDRGRDRD---RDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRT- 373
            R R R RDR    RDR+ +R++E  R R RDRD +++R  DRERDR+R R    ++R+ 
Sbjct: 358 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSR 417

Query: 374 -------HYTDRESR--RDFERSSRDGGSR-------HYRRSRS-----RSRSRSRSRSL 433
                  H  D+E R  RD ++ S+   SR       H  RSRS     RSRSRS+ ++ 
Sbjct: 418 GEGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKAS 477

Query: 434 QTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEE 449
           +  N   E+    +R G+  +T  +     K +        +K   S++R ++RD   ++
Sbjct: 478 KHKNESKEKSNKRSRSGSQGRTGSVEKR--KREHSPSREKSRKRSRSQDRSHKRDHDSKD 513

[Close]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot
Match: Q6P7Y3 (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-41
Identity = 175/498 (35.14%), Postives = 235/498 (47.19%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRA                +G
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRA----------------LG 155

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  L +W++ ++ DEEE       G + T+G  +R  L    +F TLFPRI
Sbjct: 156 FMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRI 215

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +  ++                     +   R+PP             A   A 
Sbjct: 216 PVPVQKAIDQHM---------------------KSRPRKPPQKDEQEEEEEEATAAPAAD 275

Query: 254 TRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSR---DRDYDRERSRD 313
           T      RR+  P           RRSPS R+SQ+R    S  R R     DY+ ER RD
Sbjct: 276 TGRHGDKRRSRTP-----------RRSPSPRKSQNRSRSRSHHRERHGASFDYELERERD 335

Query: 314 RDH------DRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRER--------- 373
           R        DR+RDR RDR+RDRE DRDR + R  +R+ +R R R+R+R R         
Sbjct: 336 RQRKEREGKDRDRDRDRDRERDRERDRDRRRSRTPDRNAERRRSRSRERRRSRSTSRDKR 395

Query: 374 ----DRDRERSYDYDR-------RTHYTDRESRRDFERSSRDGGSRHY------------ 433
               DRD++R  + +R       R H+ DRE  +D +RS  +G  R +            
Sbjct: 396 TERKDRDKDREAESERERSRKKDREHHKDRERSKD-KRSKGEGEERRHKDDKEEKKHREE 455

Query: 434 -RRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQK 450
            R  RSRSRSR R    +  +    R  S +R    E+ +       K +  +    + K
Sbjct: 456 KRSKRSRSRSRDRKHKAERSSKKRSRSGSRSRQEAGEEKN------RKRERSHSKDRQHK 478

[Close]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL
Match: A0A6J1JTS5 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 5.4e-214
Identity = 418/474 (88.19%), Postives = 430/474 (90.72%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRE---- 300
           RRTLP S  DRD SDDLRRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DRE    
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ----RDRGRDRDRDREHDRDREKYRDRERD--RDRERERARDRERD--RDRERSYDYDRR 360
               RDRGRDRDR+REHDRDREKYRDRERD  RDRERE+ARDRERD  RDRERSYDYDRR
Sbjct: 301 REYDRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPARGG 420
           THYTDRE RRDFERSSRDGG+RHYRRSRSRSRSRS SRSLQTG   + HHEREPSPARG 
Sbjct: 361 THYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK--GDSSRERVNRRDSSGEEVIRLGGSWK 458
           T+EKTSIISSNLAKLKD+YGDVSEQK  GD S+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL
Match: A0A5D3D5T6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00040 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 5.4e-214
Identity = 419/489 (85.69%), Postives = 430/489 (87.93%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DDLRRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ----RERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERA 360
               RERSRDRDYDRERSRDRD+DR+RDRGRDRDRDRE DRDREKYRDRERDRDRERE+A
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKA 360

Query: 361 RDRERD--RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSL 420
           RDRERD  RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSL
Sbjct: 361 RDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSL 420

Query: 421 QTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEE 458
           QT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEE
Sbjct: 421 QT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEE 468

[Close]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL
Match: A0A5A7TWJ6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00850 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.7e-213
Identity = 419/499 (83.97%), Postives = 430/499 (86.17%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DDLRRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 --------------RERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRE 360
                         RERSRDRDYDRERSRDRD+DR+RDRGRDRDRDRE DRDREKYRDRE
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRE 360

Query: 361 RDRDRERERARDRERD--RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSR 420
           RDRDRERE+ARDRERD  RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSR
Sbjct: 361 RDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSR 420

Query: 421 SRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRER 458
           SRSRSR RSLQT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  +
Sbjct: 421 SRSRSRGRSLQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--K 478

[Close]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL
Match: A0A6J1FF63 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.7e-213
Identity = 410/477 (85.95%), Postives = 430/477 (90.15%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRE---- 300
           RRTLP S  DRD +DDLRRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DRE    
Sbjct: 241 RRTLPTSAIDRDNNDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 --------RDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRR 360
                   RDRGRDRDR++EHDRDREKYRDRERDR+R+RER + R+R+RDRERSYDYDRR
Sbjct: 301 REYDRDRDRDRGRDRDREQEHDRDREKYRDRERDRERDREREKARDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPARGG 420
           THYTDR+ RRDFERSSRDGG+RHYRRSRSRSRSRSRSRSLQTG   + HHEREPSPARG 
Sbjct: 361 THYTDRDGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK-----GDSSRERVNRRDSSGEEVIRLGGSWK 458
           T+EKTSIISSNLAKLKD+YGDVSEQK     GDSS+ER+NRRDSSGEEVIRLGGSW+
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGDSSKERINRRDSSGEEVIRLGGSWR 461

[Close]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL
Match: A0A1S3CIJ0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103501359 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 1.1e-211
Identity = 419/509 (82.32%), Postives = 430/509 (84.48%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DDLRRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ------------------------RERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHD 360
                                   RERSRDRDYDRERSRDRD+DR+RDRGRDRDRDRE D
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELD 360

Query: 361 RDREKYRDRERDRDRERERARDRERD--RDRERSYDYDRRTHYTDRESRRDFERSSRDGG 420
           RDREKYRDRERDRDRERE+ARDRERD  RDRERSYDYDRRTHY+DRESRRDFERSSRDGG
Sbjct: 361 RDREKYRDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGG 420

Query: 421 SRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVS 458
           +RHYRRSRSRSRSRSR RSLQT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVS
Sbjct: 421 TRHYRRSRSRSRSRSRGRSLQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVS 480

[Close]

BLAST of Clc01G09030.2 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 464.5 bits (1194), Expect = 9.6e-131
Identity = 286/459 (62.31%), Postives = 328/459 (71.46%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRM TMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGR 301
           R  PP+  DR+  D++++  S RRSQSR++        DRD DR+R R+R+ DRER+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFE 361
           DR            YR+RERD   +R   RD                  Y  R  R D+E
Sbjct: 303 DR------------YRERERDYGNDRRSRRD------------------YDSRSRRNDYE 362

Query: 362 RSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNLAK 421
               D  SRH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNLAK
Sbjct: 363 ----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNLAK 393

Query: 422 LKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 458
           LKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 LKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of Clc01G09030.2 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 444.9 bits (1143), Expect = 7.9e-125
Identity = 279/459 (60.78%), Postives = 321/459 (69.93%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRM TMGVY        YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVY--------YYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGR 301
           R  PP+  DR+  D++++  S RRSQSR++        DRD DR+R R+R+ DRER+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFE 361
           DR            YR+RERD   +R   RD                  Y  R  R D+E
Sbjct: 303 DR------------YRERERDYGNDRRSRRD------------------YDSRSRRNDYE 362

Query: 362 RSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNLAK 421
               D  SRH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNLAK
Sbjct: 363 ----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNLAK 385

Query: 422 LKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 458
           LKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 LKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 385

[Close]

BLAST of Clc01G09030.2 vs. TAIR 10
Match: AT5G37370.4 (PRP38 family protein )

HSP 1 Score: 377.9 bits (969), Expect = 1.2e-104
Identity = 244/406 (60.10%), Postives = 280/406 (68.97%), Query Frame = 0


Query: 55  MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 114
           M GNCRGPSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                G
Sbjct: 1   MGGNCRGPSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------G 60

Query: 115 FLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIP 174
           FLYLRYVAD KTLW W+EPY+KD+EEFSPGS+GRM TMGVYVRDLLLG YYFDTLFPRIP
Sbjct: 61  FLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIP 120

Query: 175 VPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAST 234
           VPV+RQ+VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRAST
Sbjct: 121 VPVMRQIVSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRAST 180

Query: 235 RDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHD 294
           R SSPVRR  PP+  DR+  D++++  S RRSQSR++        DRD DR+R R+R+ D
Sbjct: 181 RGSSPVRRP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKD 240

Query: 295 RERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDR 354
           RER+RGRDR            YR+RERD   +R   RD                  Y  R
Sbjct: 241 RERERGRDR------------YRERERDYGNDRRSRRD------------------YDSR 300

Query: 355 ESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--I 414
             R D+E    D  SRH RRSRSRSRSRSRS  +       EREP+P R  + ++ S   
Sbjct: 301 SRRNDYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVT 338

Query: 415 ISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 458
           ++SNLAKLKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 361 VNSNLAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 338

[Close]

BLAST of Clc01G09030.2 vs. TAIR 10
Match: AT5G37370.3 (PRP38 family protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.2e-44
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 2  EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
          EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3  EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62 PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAV 98
          PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+
Sbjct: 63 PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAI 98

[Close]

BLAST of Clc01G09030.2 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-06
Identity = 68/160 (42.50%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 236 DSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDR 295
           +SSP       S    D+  D  +         R+   +++R R++D DRE+SRDRD ++
Sbjct: 26  ESSPFHED-SKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREK 85

Query: 296 ERDRGRDRDRDREHDRDREKYRDRERDRDRERERARD--------RERDRDRERSYDYDR 355
            RDR RDR+R ++  RDR  +RDR RDR RER   RD        R RDRDR RS D DR
Sbjct: 86  SRDRDRDRERSKDRQRDRH-HRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDR 145

Query: 356 RTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRS 388
              +  R   R   RS R   S H  +S  RSRSRSRSRS
Sbjct: 146 EVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRS 183

The following BLAST results are available for this feature:

BLAST of Clc01G09030.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875168.1	3.1e-224	91.68	pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169....	[more]
XP_011655154.1	3.3e-218	91.07	pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 ...	[more]
KAG7016573.1	6.5e-214	86.61	Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
TYK18924.1	1.1e-213	85.69	pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa]	[more]
XP_022993767.1	1.1e-213	88.19	pre-mRNA splicing factor SR-like 1 [Cucurbita maxima]	[more]

BLAST of Clc01G09030.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWB1	1.3e-129	62.31	Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ...	[more]
Q5VTL8	3.4e-48	38.00	Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1	[more]
Q80SY5	1.7e-47	38.27	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1	[more]
Q6AXY7	1.7e-47	37.71	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1	[more]
Q6P7Y3	1.8e-41	35.14	Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1	[more]

BLAST of Clc01G09030.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTS5	5.4e-214	88.19	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=...	[more]
A0A5D3D5T6	5.4e-214	85.69	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TWJ6	7.7e-213	83.97	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1FF63	7.7e-213	85.95	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 S...	[more]
A0A1S3CIJ0	1.1e-211	82.32	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103501359 PE=3 SV=1	[more]

BLAST of Clc01G09030.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37370.1	9.6e-131	62.31	PRP38 family protein	[more]
AT5G37370.2	7.9e-125	60.78	PRP38 family protein	[more]
AT5G37370.4	1.2e-104	60.10	PRP38 family protein	[more]
AT5G37370.3	5.2e-44	84.38	PRP38 family protein	[more]
AT1G60900.1	2.5e-06	42.50	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 12..98 e-value: 4.0E-29 score: 101.7 coord: 101..177 e-value: 4.3E-15 score: 56.1
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 310..455 coord: 1..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..244
None	No IPR available	PANTHER	PTHR23142:SF3	PRP38 FAMILY PROTEIN	coord: 310..455 coord: 1..341

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc01G09030	Clc01G09030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G09030.2-exon	Clc01G09030.2-exon-ClcChr01:9755426..9756310	exon
Clc01G09030.2-exon	Clc01G09030.2-exon-ClcChr01:9757567..9757638	exon
Clc01G09030.2-exon	Clc01G09030.2-exon-ClcChr01:9759922..9760002	exon
Clc01G09030.2-exon	Clc01G09030.2-exon-ClcChr01:9762480..9762815	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G09030.2-cds	Clc01G09030.2-cds-ClcChr01:9755426..9756310	CDS
Clc01G09030.2-cds	Clc01G09030.2-cds-ClcChr01:9757567..9757638	CDS
Clc01G09030.2-cds	Clc01G09030.2-cds-ClcChr01:9759922..9760002	CDS
Clc01G09030.2-cds	Clc01G09030.2-cds-ClcChr01:9762480..9762815	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc01G09030.2	Clc01G09030.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome