Cla97C11G225020.2 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C11G225020.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Localized to the inner membrane of the chloroplast
Location	Cla97Chr11: 30612372 .. 30615124 (-)
Sequence length	954
RNA-Seq Expression	Cla97C11G225020.2
Synteny	Cla97C11G225020.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGATCAAATTTGAAAACTGCCGATAAACGTTTGGGGAGCGTGTCCCCTACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAATCTCTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTTTGAAATCACTACTTAAACAATATGCCATTAAGTAATCTCGTATGATAGAATTATAGTCTTGGGAGTCTTTTTTTTGGAAGGAATTATTGTTAATAACTATTGTAACGATCAGAAACTCTTTACACAGTAAGAATGCATGCGTAGATTTCTTGAACAGGTAAGCTTATCATTGGGGTTTGCAGAAACTGGAAATCCAACTACTGTACAAATCCAAAATGCATGTGTTAACATCAGGCAGTCGCTAGTCAAGAGCCAAGAATCTAACCAATTTGAACTGAGCCAGTCCAATTGGTTCAAACAGATTTGTGACCAAGCATGGGCCTGTTTGGTTTGCCATGCTTGAAACTGAGTCTCATTAATTTAGTTTTGATTTGGTCAAATACTGATCAAATCAACCTAATGAATGTGTATACTCATCCTATTCAAGATGTCAAATGCAACATTTGTCAAATTTGATCTATAAACTCTGTATAGTTTTGGTTTTAGGGGTTATGCCTCCATATGAGAGTGAAGCATTTGTTCCTGTTGTATTTGGGGACTAAGTGTTTTGAGGCGGTTAATCTGTAAGGAGAGAAACAATAGGATTCTTAAATACAAAGAGACTGGCTCAATCTGAAAATTTCTGTTCAAATCTTTCACTCCTGTGTGAAAGAAGCATTTTCTGTCCCTTTTTTTTCTTTTTTTTTTTTTGTTTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACCTGGTATAAATGTGTTAAGTCTTTCGATGGTTATTAGGTTCTAATGTTCTAGTTTTCGCAAAGATATTTCTCTTCCCCCAGCCCTTAGGTTGTTTCTCTCTCATTTTGCCTTTAAAGCATCATTTCTTGTCCAAACAAATAAATAAAACTCTGTATGGTTGAAAGTAATGTACAGTCTGTAACAATTGTTAGTATCCCATGTGGCATTCTCCAGTGGAAATTATTAATAATGTTAATATAACTTTCAAATGGACATGGCGTGAGTTGATGTTTATTATATTGTATATTACCTTGGTGTGACAGTCCTTTAGCTTCATTTGAAATATTTTAATGGCAGTTAAGTTTATTGTGTACATTATGACAGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACACTTGGCTGTGTATATGCGCCTCAGGTTTTTGACTTTTGTTCATCTCTTATCTAACCCCTAAATTGTACATATGGGTAGTTCCACCTTGTATATCTGTTACTTGTGTGCTATGGATACTACATTATGGAAGATACATATTTAAGTTATCTACCAAAAAATATGCACAACTGTTGTCTCTGAGCTTTAAGCCCAAATCCTAGACTTTTTATGACCGAGAGTTGATATTGTATTTGAATTACAGATTAGCAAGGCACTTGCCGGAGCAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTGTGAAATCACGCAGTCTCTTCTTATTTGTGGCAAGTTATCTCCTCAATGGATATTTCGTCTTCATTTGACACTAATTTAGTGAAGACATTGGTTTACCTAATGATAATCGTGAATTTTATTTTATTTTCTGGTAACATCACATATACACTTCTTGCTGAGTGATAATTGGGATCCGAAAAAAGTAAGCTGTAAGCTCAATTAAAATGAATTCAACTTAGGAATCTACTAGTTTTTGTTGGCAACAAAATGTAGTAGGTTGTCAAAGATGTGAAAATGTGCTTGTGTAAGTTTATTTTCGGCAATTCTGCTGGGGGTATTTGACTTGGAGGTAGTCTAGAAGATTGGCAAAACTGGTAGAACAGGGTAAGCGAATCTACACCCATCTAGATCTATACAAAATTAATCTGTGAATCAAATATAGACCCATGTTGCTGACCAAAAGAACATGAATATGACAATATTTTGCTTTTGTTTATGCAATTCGCTTTCCTTTTTTAAAAATTTCTGAACTTCATCTTTAGAAGAAATATAACAATAAGTTTTGCTTAAACAGTTCCTGCTTGGTTTTTGGTTTTTGATGTGCCAACATGTACATGTTTCTTTTTTATTCAAATTGCAGAAAACAAGAAAAGTACTGGCACAGAAGATCGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTTCGCACAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAACCTGCCATTTGAAAGTATCGTCTCATCACGTTGGTCTTCCTGCACCGCCCACGACTCTGGGACTCGGAATAATAGTTAATATTCTAGCTATTATCTTTGATTTTCTCTTTTTTGAACATTTGAATCCGAGCTTTGATGTGCAATATCCATCCTCGCATAATGTGTTGCTTTGATCGCTCAAATGCTCCATATAAAGTTGAATAGATTTGTAGAAGAGCATTCTTGCTGTGTTTCCTATTTTGTACACGAACAACAGGCATTGTTTTGTATCTGAAAGCCACATATTTCATCCCTTCCGCCTACTATTTGCATTTTTTTTTATTCTTCTAGCACTGTTGGGTCACCACTCGCCAGCCA

mRNA sequence

ATGCCAGGATCAAATTTGAAAACTGCCGATAAACGTTTGGGGAGCGTGTCCCCTACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAATCTCTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGATTTCTTGAACAGGTAAGCTTATCATTGGGGTTTGCAGAAACTGGAAATCCAACTACTGTACAAATCCAAAATGCATGTGTTAACATCAGGCAGTCGCTAGTCAAGAGCCAAGAATCTAACCAATTTGAACTGAGCCAGTCCAATTGGTTCAAACAGATTTGTGACCAAGCATGGGCCTTTAAGTTTATTGTGTACATTATGACAGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGATTAGCAAGGCACTTGCCGGAGCAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTACTGGCACAGAAGATCGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTTCGCACAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAACCTGCCATTTGAAAGTATCGTCTCATCACGTTGGTCTTCCTGCACCGCCCACGACTCTGGGACTCGGAATAATAGTTAATATTCTAGCTATTATCTTTGATTTTCTCTTTTTTGAACATTTGAATCCGAGCTTTGATGTGCAATATCCATCCTCGCATAATGTGTTGCTTTGATCGCTCAAATGCTCCATATAAAGTTGAATAGATTTGTAGAAGAGCATTCTTGCTGTGTTTCCTATTTTGTACACGAACAACAGGCATTGTTTTGTATCTGAAAGCCACATATTTCATCCCTTCCGCCTACTATTTGCATTTTTTTTTATTCTTCTAGCACTGTTGGGTCACCACTCGCCAGCCA

Coding sequence (CDS)

ATGCCAGGATCAAATTTGAAAACTGCCGATAAACGTTTGGGGAGCGTGTCCCCTACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAATCTCTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGATTTCTTGAACAGGTAAGCTTATCATTGGGGTTTGCAGAAACTGGAAATCCAACTACTGTACAAATCCAAAATGCATGTGTTAACATCAGGCAGTCGCTAGTCAAGAGCCAAGAATCTAACCAATTTGAACTGAGCCAGTCCAATTGGTTCAAACAGATTTGTGACCAAGCATGGGCCTTTAAGTTTATTGTGTACATTATGACAGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGATTAGCAAGGCACTTGCCGGAGCAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTACTGGCACAGAAGATCGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTTCGCACAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAACCTGCCATTTGA

Protein sequence

MPGSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETGNPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFIVYIMTVMADGQAMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAI

Homology

[Close]

BLAST of Cla97C11G225020.2 vs. NCBI nr
Match: XP_038900139.1 (uncharacterized protein LOC120087268 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-44
Identity = 118/202 (58.42%), Postives = 128/202 (63.37%), Query Frame = 0


Query: 2   PGSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAET 61
           PGSNLKTA+K LGSVSPTSLLL PGWVGK  LSTFRRPLSVQAAY            ++ 
Sbjct: 20  PGSNLKTANKHLGSVSPTSLLLGPGWVGKTKLSTFRRPLSVQAAY------------SDG 79

Query: 62  GNPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADG 121
           G  +   I                                       FI  +++  +  G
Sbjct: 80  GRSSNAGI---------------------------------------FIGGFVLGGLIVG 139

Query: 122 QAMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSA 181
                +  +ISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSA
Sbjct: 140 TLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSA 170

Query: 182 QLRTEDPPNGVAVNSDEVEPAI 203
           QLRTEDPPNGVAVNSDEVEPAI
Sbjct: 200 QLRTEDPPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. NCBI nr
Match: KAG7037964.1 (hypothetical protein SDJN02_01597, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-43
Identity = 116/203 (57.14%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 1   MPGSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAE 60
           +PGSNLKTADKR GSVSPT  LLNPGWVGKA LSTFRRPLSVQAAY            ++
Sbjct: 18  LPGSNLKTADKRFGSVSPTRSLLNPGWVGKAKLSTFRRPLSVQAAY------------SD 77

Query: 61  TGNPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMAD 120
            G  ++  I                                       FI  +++  +  
Sbjct: 78  GGRSSSAGI---------------------------------------FIGGFVLGGLIV 137

Query: 121 GQAMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS 180
           G     +  +ISKALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS
Sbjct: 138 GTLGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS 169

Query: 181 AQLRTEDPPNGVAVNSDEVEPAI 203
           +QLRTED PNGVAVNSDEVEPAI
Sbjct: 198 SQLRTEDSPNGVAVNSDEVEPAI 169

[Close]

BLAST of Cla97C11G225020.2 vs. NCBI nr
Match: KAG6591206.1 (hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024090.1 hypothetical protein SDJN02_12903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.0 bits (471), Expect = 3.1e-43
Identity = 118/201 (58.71%), Postives = 132/201 (65.67%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADK LGSVSPTSLLLNPGWVGKA LST RRPLSVQAAYR+              
Sbjct: 21  GSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRY-------------- 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
                       N+R         N+     SN          A  F+  +++  +  G 
Sbjct: 81  ------------NLR---------NRDGGRSSN----------AGIFVGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 176

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRT+DPPNGVAVNSDE+EPAI
Sbjct: 201 LRTDDPPNGVAVNSDEIEPAI 176

[Close]

BLAST of Cla97C11G225020.2 vs. NCBI nr
Match: XP_023521457.1 (uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-43
Identity = 116/201 (57.71%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADKR GSVSPT LLLNPGWVGKA LSTFRRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             ++  I                                       FI  +++  +  G 
Sbjct: 81  RSSSAGI---------------------------------------FIGGFVLGGLVVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRTED PNGVAVNSDEVEPAI
Sbjct: 201 LRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. NCBI nr
Match: XP_022941515.1 (uncharacterized protein LOC111446794 [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-43
Identity = 116/201 (57.71%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADKR GSVSPT LLLNPGWVGKA LSTFRRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             ++  I                                       FI  +++  +  G 
Sbjct: 81  RSSSAGI---------------------------------------FIGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRTED PNGVAVNSDEVEPAI
Sbjct: 201 LRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 116/201 (57.71%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADKR GSVSPT LLLNPGWVGKA LSTFRRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             ++  I                                       FI  +++  +  G 
Sbjct: 81  RSSSAGI---------------------------------------FIGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRTED PNGVAVNSDEVEPAI
Sbjct: 201 LRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 5.7e-43
Identity = 115/201 (57.21%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADKR GSVSPT LLLNPGWVGKA LSTFRRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             ++  I                                       FI  +++  +  G 
Sbjct: 81  RSSSAGI---------------------------------------FIGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKAVEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRTED PNGVAVNSDEVEPAI
Sbjct: 201 LRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 9.8e-43
Identity = 113/201 (56.22%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADK LGSVSPTSLLLNPGWVGKA LST RRPLSVQAAY            +++G
Sbjct: 21  GSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY------------SDSG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             +   I                                       F+  +++  +  G 
Sbjct: 81  RSSNAGI---------------------------------------FVGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRT+DPPNGVAVNSDE+EPAI
Sbjct: 201 LRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42
Identity = 113/201 (56.22%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKTADK LGSVSPTSLLLNPGWVGKA LST RRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             +   I                                       F+  +++  +  G 
Sbjct: 81  RSSNAGI---------------------------------------FVGGFVLGGLIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+Q
Sbjct: 141 LGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LRT+DPPNGVAVNSDE+EPAI
Sbjct: 201 LRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42
Identity = 114/201 (56.72%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 3   GSNLKTADKRLGSVSPTSLLLNPGWVGKANLSTFRRPLSVQAAYRFLEQVSLSLGFAETG 62
           GSNLKT DKRLGS+SPTSL+L+PGWVGKA LSTFRRPLSVQAAY            ++ G
Sbjct: 21  GSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSVQAAY------------SDGG 80

Query: 63  NPTTVQIQNACVNIRQSLVKSQESNQFELSQSNWFKQICDQAWAFKFI-VYIMTVMADGQ 122
             +   I                                       FI  +++  +  G 
Sbjct: 81  RSSNAGI---------------------------------------FIGGFVLGGIIVGT 140

Query: 123 AMQAFLLEISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 182
               +  +ISKA+AGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ
Sbjct: 141 LGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQ 170

Query: 183 LRTEDPPNGVAVNSDEVEPAI 203
           LR EDPPNGVAVNSDEVE AI
Sbjct: 201 LRPEDPPNGVAVNSDEVESAI 170

[Close]

BLAST of Cla97C11G225020.2 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 57/71 (80.28%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 129 EISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPP 188
           +ISKA+AGADRKDLMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VS+QL++ED P
Sbjct: 95  QISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTP 154

Query: 189 NGVAVNSDEVE 200
           NG A+++DE+E
Sbjct: 155 NGAALSTDEIE 165

The following BLAST results are available for this feature:

BLAST of Cla97C11G225020.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900139.1	3.7e-44	58.42	uncharacterized protein LOC120087268 [Benincasa hispida]	[more]
KAG7037964.1	2.4e-43	57.14	hypothetical protein SDJN02_01597, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6591206.1	3.1e-43	58.71	hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023521457.1	4.1e-43	57.71	uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]	[more]
XP_022941515.1	5.3e-43	57.71	uncharacterized protein LOC111446794 [Cucurbita moschata]	[more]

BLAST of Cla97C11G225020.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G225020.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW3	2.6e-43	57.71	uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1IT36	5.7e-43	57.21	uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366...	[more]
A0A6J1IGB6	9.8e-43	56.22	uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436...	[more]
A0A6J1FC82	2.2e-42	56.22	uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A1S3BV81	2.8e-42	56.72	uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=...	[more]

BLAST of Cla97C11G225020.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42960.1	1.1e-25	80.28	expressed protein localized to the inner membrane of the chloroplast.	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..181
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 2..48
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 125..202
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 2..48
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 125..202

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C11G225020	Cla97C11G225020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G225020.2-exon	Cla97C11G225020.2-exon-Cla97Chr11:30612372..30612851	exon
Cla97C11G225020.2-exon	Cla97C11G225020.2-exon-Cla97Chr11:30613474..30613560	exon
Cla97C11G225020.2-exon	Cla97C11G225020.2-exon-Cla97Chr11:30613834..30613901	exon
Cla97C11G225020.2-exon	Cla97C11G225020.2-exon-Cla97Chr11:30614652..30614830	exon
Cla97C11G225020.2-exon	Cla97C11G225020.2-exon-Cla97Chr11:30614985..30615124	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G225020.2-three_prime_utr	Cla97C11G225020.2-three_prime_utr-Cla97Chr11:30612372..30612716	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C11G225020.2-cds	Cla97C11G225020.2-cds-Cla97Chr11:30612717..30612851	CDS
Cla97C11G225020.2-cds	Cla97C11G225020.2-cds-Cla97Chr11:30613474..30613560	CDS
Cla97C11G225020.2-cds	Cla97C11G225020.2-cds-Cla97Chr11:30613834..30613901	CDS
Cla97C11G225020.2-cds	Cla97C11G225020.2-cds-Cla97Chr11:30614652..30614830	CDS
Cla97C11G225020.2-cds	Cla97C11G225020.2-cds-Cla97Chr11:30614985..30615124	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C11G225020.2	Cla97C11G225020.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0031090	organelle membrane
molecular_function	GO:0003824	catalytic activity