Cla97C06G113010.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C06G113010.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 4054337 .. 4055801 (+)
Sequence length153
RNA-Seq ExpressionCla97C06G113010.1
SyntenyCla97C06G113010.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTCGCGGATAGTGGGAGAAGAAAAATAGAGAGTGGGAGAGAAGATGGGGAAGATGTCGTGGGTGGTGGTGAGGGAGAGAACAAAAATGAGGTAATTAAGGAGAAGTGAGAAAAATAAACAATCTGGGAAAAAAACCAAATTAATGTACATCATTTCCATAACTTTGTGTATTTTCAAAATTTTCTCTTTTTTTTTTTTTAAATGGCAATAAATTAATGGGGTGTTATGGACTTTTGAACTTGATTTTCACATAACATTCTAACTCATTCCACTATTAATTTGAGACCTTCTTGTAAGTTGACCTATTTAATTAGGCTATTAACGTAGAAAACTCTATTATAATTGAAAGCTCAAACAGGGAGTGGACTACAATAGCACACTCGATTTTATTAAAGTTGGAGACCCAAATGATCTTTTAAATTATTTTGACCTAAAATAGAATGAAAAACAAAATAACAAAAATGGTATTTTGGCCAAAGAAAAAAAAAAAAAAATCCCATAAGTACTTCCCCCAAAAGAAGTAACCCTCATTATTTACCTTAACTCAACCACAAGGTTAATTTCAAACCAAGGTTGGTTCATCAATTTGATTATAAATAAGGGGGATCTTTTTAGGCTCTACCTCTTCCTCAAAACCCTAAAAACAAACTAAAATCTCTCTATCTCCTTTCCAAGATCCCCATAAAATAGCCTTAAAAAAGAGAGGAACCAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAAGAAAAGGGCCAAATGAGAGAGAGAAACAACAAGTCTTGAGAGAGGGACCAACCAAAGCCAGAACTAGTCAAGCTTTAAAGGATGTGTTGGGCGGTAGAGTAGTAGACACAGTTTGCGTAGAAAACGCTTCCTTCCAAAACAAAAACAAAAATTATTAACAGGTACGTTTTCTCTCTTCCAATCAACATTAAAAATGGCGGTATATTCTTTATTTTTGGTGTATTGGGTCTCTGTATTTCTTCATATACTTTGAATTCTAGCCTCTCATGGTCAAGGGGGCATTTCATCTTCGCTTTTTGTCCCTCTCTCTCTCTCTCTTTTGTATAATGACATTTCAATATATCTGCAAATATGACGCCAATGGCGGGATGTATGGATATTTAACTTTTTTCATTTCAAAAACAAACCCTAGATCAATCTTGTTTTCCCGCCAAAACACTGATCATCGAACCCAATTGATGATAGTCAATGTGTGGTGAACAAGTGGTTGCTCTTTTCATCCACCTGATTTGTGTTATGTCTTTTCGTGTTCTCGAAATTATATGACCTGGGGTTTTTGTATTTTTGTTTTTTGTTTTGGAAATTATATGACCAGGGTGATTGCATTTGATTTTTAGGGTTTGAATTCCAATTTATGGCAGGGATGTTGGGTGATAGCTGATGTGTCTGAGTTAGATTACGAAGGTGCTGCGAAGTAG

mRNA sequence

ATGGTTGTCGCGGATAGTGGGAGAAGAAAAATAGAGAGTGGGAGAGAAGATGGGGAAGATGTCGTGGGTGGTGGTGAGGGAGAGAACAAAAATGAGGGATGTTGGGTGATAGCTGATGTGTCTGAGTTAGATTACGAAGGTGCTGCGAAGTAG

Coding sequence (CDS)

ATGGTTGTCGCGGATAGTGGGAGAAGAAAAATAGAGAGTGGGAGAGAAGATGGGGAAGATGTCGTGGGTGGTGGTGAGGGAGAGAACAAAAATGAGGGATGTTGGGTGATAGCTGATGTGTCTGAGTTAGATTACGAAGGTGCTGCGAAGTAG

Protein sequence

MVVADSGRRKIESGREDGEDVVGGGEGENKNEGCWVIADVSELDYEGAAK
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C06G113010.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G113010.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G113010.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G113010.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..26

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C06G113010Cla97C06G113010gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G113010.1-exonCla97C06G113010.1-exon-Cla97Chr06:4054337..4054432exon
Cla97C06G113010.1-exonCla97C06G113010.1-exon-Cla97Chr06:4055745..4055801exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G113010.1-cdsCla97C06G113010.1-cds-Cla97Chr06:4054337..4054432CDS
Cla97C06G113010.1-cdsCla97C06G113010.1-cds-Cla97Chr06:4055745..4055801CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C06G113010.1Cla97C06G113010.1-proteinpolypeptide